| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499519
Identifier: 34499519
GI number: 34499519
Start: 4394308
End: 4395474
Strand: Reverse
Name: 34499519
Synonym: CV_4064
Alternate gene names: NA
Gene position: 4395474-4394308 (Counterclockwise)
Preceding gene: 34499520
Following gene: 34499516
Centisome position: 92.52
GC content: 71.64
Gene sequence:
>1167_bases ATGACATTCAAGGCAATCTTGCGCGCGTCGCGCTGGGTGATCGCTGCCGCGCTGGCGGCACAGGCGCAAGCCGCGCCGGT GCAGGATTTCGGCGAGCCCAACCTGGCGCGGCTGGCCGCCCGCTTCAACCTGCAGGGCGACGCCCAGCCGCCGGTGCGCG TGATCCAGTTCGGCGATTCCCACACCGCCGCCGATTACTTCAGCGGCGAGTTGCGCGCCAGGCTGCAGGCGCGTTACGGC GACGCCGGCATAGGCTGGCTGCCGCCGGTCAACGTGCCGGGACAGCGCAACGCGCTGGCCTATGTCCGCAGCGAAGGCTG GACCCTGCGCAACAGCCGCCGCGACGCCGATTCCGATTTTCCGCTGGGGGGCTACGTCGGCATCGCCCAGCGGGCCGGCG CGTCCATCACCGTGCATCCGCGCGCCGAGGACAATGGCTTGTGGCGAGTGCGGATCTGGCTGCGGCAGAGCGCCGACGGC CAGGCGCTGACCGTCGACGACGGCAATGGCGCGCGGCGGGCGCAGGTCGGCGCCGGCGCGGGCTGGCAGCGGGTGGAAAT GAAGCTGAAGCTGCCGTTTGCCTTGCGCGCGGACAGCCTGCCGGCGCCGGAAGTGGGCGGCTACGAGCTGGAGAAGCTGG CGCCGGGCGTGGTGCTGGACACCGTGGGCAGCAACGGCGCCGAACTGGCGCTGTGGCGCAGCTGGGGCGCAGCCTGGGGC AGGCAGCTGGCGGCGAGGGACGCCGACCTGGTGATCCTGGCCTACGGCACCAACGAGGCTTTCGACGCCAAGCTGGACCT GGACGAATACCGCGCCGCGCTGCAGGGCGCGGTCAACCTGGTGCGCAGCCAGCTGCCGCAGGCGGCCATCCTGCTCCTCG GTGCCCCGGACGCTGCGCGGAGCAAGGGCGGCGCGGTCAGCCGCGAATGCTCGGGCCCGCAACGGCCGCTGATGCTGAGC GCGGTGCAGCAGGCGCAGCGCCAACTGGCGCGCGACAACCATTTATTGTATTGGGACTGGCAGCTGGCGATGGGCGGGCC GTGCAGCATGCGGACGTGGCGGCAGCAGCAGCTGGGCCGCCCGGACATGGTCCACTTCACCGCGCCCGGCTATACCCGGC TGGGCGACGATCTCTACGAAGGCCTGAGCCAGCGCCTGTCGCGCTGA
Upstream 100 bases:
>100_bases ACCAGGGCGAGGTGGCGGTGCGCACCGCAGACGGCGTGCACTTCACCCGCCAGGGCCAGCTGCTGCTGGCGCGCCGCGTG TTGGCGGAATTGAGGTTCGA
Downstream 100 bases:
>100_bases GCGTTCAGGCGCCGGTTTCCGCCGCCGGAACCGGTTGCGGCTGTTCTTCCAGCGACAGCCGCAGGCCGCGGGCCACCTCG CTGCGGGCCTGTTCGGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Esterase Sgnh Hydrolase-Type
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTFKAILRASRWVIAAALAAQAQAAPVQDFGEPNLARLAARFNLQGDAQPPVRVIQFGDSHTAADYFSGELRARLQARYG DAGIGWLPPVNVPGQRNALAYVRSEGWTLRNSRRDADSDFPLGGYVGIAQRAGASITVHPRAEDNGLWRVRIWLRQSADG QALTVDDGNGARRAQVGAGAGWQRVEMKLKLPFALRADSLPAPEVGGYELEKLAPGVVLDTVGSNGAELALWRSWGAAWG RQLAARDADLVILAYGTNEAFDAKLDLDEYRAALQGAVNLVRSQLPQAAILLLGAPDAARSKGGAVSRECSGPQRPLMLS AVQQAQRQLARDNHLLYWDWQLAMGGPCSMRTWRQQQLGRPDMVHFTAPGYTRLGDDLYEGLSQRLSR
Sequences:
>Translated_388_residues MTFKAILRASRWVIAAALAAQAQAAPVQDFGEPNLARLAARFNLQGDAQPPVRVIQFGDSHTAADYFSGELRARLQARYG DAGIGWLPPVNVPGQRNALAYVRSEGWTLRNSRRDADSDFPLGGYVGIAQRAGASITVHPRAEDNGLWRVRIWLRQSADG QALTVDDGNGARRAQVGAGAGWQRVEMKLKLPFALRADSLPAPEVGGYELEKLAPGVVLDTVGSNGAELALWRSWGAAWG RQLAARDADLVILAYGTNEAFDAKLDLDEYRAALQGAVNLVRSQLPQAAILLLGAPDAARSKGGAVSRECSGPQRPLMLS AVQQAQRQLARDNHLLYWDWQLAMGGPCSMRTWRQQQLGRPDMVHFTAPGYTRLGDDLYEGLSQRLSR >Mature_387_residues TFKAILRASRWVIAAALAAQAQAAPVQDFGEPNLARLAARFNLQGDAQPPVRVIQFGDSHTAADYFSGELRARLQARYGD AGIGWLPPVNVPGQRNALAYVRSEGWTLRNSRRDADSDFPLGGYVGIAQRAGASITVHPRAEDNGLWRVRIWLRQSADGQ ALTVDDGNGARRAQVGAGAGWQRVEMKLKLPFALRADSLPAPEVGGYELEKLAPGVVLDTVGSNGAELALWRSWGAAWGR QLAARDADLVILAYGTNEAFDAKLDLDEYRAALQGAVNLVRSQLPQAAILLLGAPDAARSKGGAVSRECSGPQRPLMLSA VQQAQRQLARDNHLLYWDWQLAMGGPCSMRTWRQQQLGRPDMVHFTAPGYTRLGDDLYEGLSQRLSR
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42214; Mature: 42083
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFKAILRASRWVIAAALAAQAQAAPVQDFGEPNLARLAARFNLQGDAQPPVRVIQFGDS CCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEECCC HTAADYFSGELRARLQARYGDAGIGWLPPVNVPGQRNALAYVRSEGWTLRNSRRDADSDF CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCC PLGGYVGIAQRAGASITVHPRAEDNGLWRVRIWLRQSADGQALTVDDGNGARRAQVGAGA CCCCEEEHHHHCCCEEEEECCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCEEECCCCC GWQRVEMKLKLPFALRADSLPAPEVGGYELEKLAPGVVLDTVGSNGAELALWRSWGAAWG CCEEEEEEEECCEEEECCCCCCCCCCCEEHHHHCCCEEEECCCCCCCEEEEEEHHHHHHH RQLAARDADLVILAYGTNEAFDAKLDLDEYRAALQGAVNLVRSQLPQAAILLLGAPDAAR HHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHH SKGGAVSRECSGPQRPLMLSAVQQAQRQLARDNHLLYWDWQLAMGGPCSMRTWRQQQLGR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHCCC PDMVHFTAPGYTRLGDDLYEGLSQRLSR CCEEEEECCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TFKAILRASRWVIAAALAAQAQAAPVQDFGEPNLARLAARFNLQGDAQPPVRVIQFGDS CHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEECCC HTAADYFSGELRARLQARYGDAGIGWLPPVNVPGQRNALAYVRSEGWTLRNSRRDADSDF CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCC PLGGYVGIAQRAGASITVHPRAEDNGLWRVRIWLRQSADGQALTVDDGNGARRAQVGAGA CCCCEEEHHHHCCCEEEEECCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCEEECCCCC GWQRVEMKLKLPFALRADSLPAPEVGGYELEKLAPGVVLDTVGSNGAELALWRSWGAAWG CCEEEEEEEECCEEEECCCCCCCCCCCEEHHHHCCCEEEECCCCCCCEEEEEEHHHHHHH RQLAARDADLVILAYGTNEAFDAKLDLDEYRAALQGAVNLVRSQLPQAAILLLGAPDAAR HHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHH SKGGAVSRECSGPQRPLMLSAVQQAQRQLARDNHLLYWDWQLAMGGPCSMRTWRQQQLGR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHCCC PDMVHFTAPGYTRLGDDLYEGLSQRLSR CCEEEEECCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA