| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499520
Identifier: 34499520
GI number: 34499520
Start: 4395471
End: 4396466
Strand: Reverse
Name: 34499520
Synonym: CV_4065
Alternate gene names: NA
Gene position: 4396466-4395471 (Counterclockwise)
Preceding gene: 34499521
Following gene: 34499519
Centisome position: 92.54
GC content: 66.37
Gene sequence:
>996_bases ATGCTCGCCGCCTATCCGCACCGCCGCATCCTCGTCATCCTGCTCAGCTCCATGCTGCTGCTGTTCTGGCTGGAACAGGC CGCAGTCAACGCCTACTGGCGGCAGACTTTCCACGCGCCCAGCCTGCTGGAGCGGCTGGACGCGCTGTCGCCGTGGCGCG AGGGCGGCTCGCTGGGCGGCGGTTTGCGGCGGCACAGCGAAGCGCTGCAGCAGCAAGTGGGCAGCTGGGACCGGCGGATG ATAGACAGCCTGAACGCGTGCTGCCTGAAACCGAAGCCGAGCGCGCAGGCCGCCGCGGCGAAGCCGGCGGCGCCCAAGCC GCAGGCGTCGGCCGCTGTCGCCGCCGTCAAGGCGGTGGATCCCCGGCTGGCGCTGCAGGAAGGGCTGCCGGTGCTGCTGG CCGGCGACTCGATGATGCAGGGCGTGGCGCTGCACTTGCTGCCGCCGCTGTTCCGGCAGCACCAGGTCAAGGCGATAGAC ATCAGCAAGCAGAGCACCGGTCTGACCTATCCAGACTTCTTCAACTGGCCGGCGACGATAGAGCGCCAGCTGGCGGCCAA TCCCAAAACCCAGTTGCTGGTGATGTTCGTCGGCGCCAACGATACTTGGGACATGGTCAACGGCAATCATTACATCCGCT TCGCGTCGCCAGATTGGGAGCAGCGCTACCGCGAGCGGATACGCAGCATTCTCGCCAGCGCCGGCAAGCGCAAGGTGAAG GTGTTGTGGCTGGGCCTGCCCAATATGAGCCGCGACAAACTGAACGACGGCGTGCATTACCTGAACCGGCTGTACCGCGA GGAAGTCGCCGCCGGCGGCGGGCGTTTCATCTCCACCCGCGAGACGCTGGGCAGCCAGGATGACAGTTTCAACAAATTCA TGACATTGCCCGACCAGGGCGAGGTGGCGGTGCGCACCGCAGACGGCGTGCACTTCACCCGCCAGGGCCAGCTGCTGCTG GCGCGCCGCGTGTTGGCGGAATTGAGGTTCGAATGA
Upstream 100 bases:
>100_bases CCGCTGTTGCTGAGCGCGATCGCGCTGCTGGTGATCTCGCTGGCGCCGTCCGGCATTCCCGCCTTCATTTATTACCAATT CTGACGATCCGACCTTCGCC
Downstream 100 bases:
>100_bases CATTCAAGGCAATCTTGCGCGCGTCGCGCTGGGTGATCGCTGCCGCGCTGGCGGCACAGGCGCAAGCCGCGCCGGTGCAG GATTTCGGCGAGCCCAACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MLAAYPHRRILVILLSSMLLLFWLEQAAVNAYWRQTFHAPSLLERLDALSPWREGGSLGGGLRRHSEALQQQVGSWDRRM IDSLNACCLKPKPSAQAAAAKPAAPKPQASAAVAAVKAVDPRLALQEGLPVLLAGDSMMQGVALHLLPPLFRQHQVKAID ISKQSTGLTYPDFFNWPATIERQLAANPKTQLLVMFVGANDTWDMVNGNHYIRFASPDWEQRYRERIRSILASAGKRKVK VLWLGLPNMSRDKLNDGVHYLNRLYREEVAAGGGRFISTRETLGSQDDSFNKFMTLPDQGEVAVRTADGVHFTRQGQLLL ARRVLAELRFE
Sequences:
>Translated_331_residues MLAAYPHRRILVILLSSMLLLFWLEQAAVNAYWRQTFHAPSLLERLDALSPWREGGSLGGGLRRHSEALQQQVGSWDRRM IDSLNACCLKPKPSAQAAAAKPAAPKPQASAAVAAVKAVDPRLALQEGLPVLLAGDSMMQGVALHLLPPLFRQHQVKAID ISKQSTGLTYPDFFNWPATIERQLAANPKTQLLVMFVGANDTWDMVNGNHYIRFASPDWEQRYRERIRSILASAGKRKVK VLWLGLPNMSRDKLNDGVHYLNRLYREEVAAGGGRFISTRETLGSQDDSFNKFMTLPDQGEVAVRTADGVHFTRQGQLLL ARRVLAELRFE >Mature_331_residues MLAAYPHRRILVILLSSMLLLFWLEQAAVNAYWRQTFHAPSLLERLDALSPWREGGSLGGGLRRHSEALQQQVGSWDRRM IDSLNACCLKPKPSAQAAAAKPAAPKPQASAAVAAVKAVDPRLALQEGLPVLLAGDSMMQGVALHLLPPLFRQHQVKAID ISKQSTGLTYPDFFNWPATIERQLAANPKTQLLVMFVGANDTWDMVNGNHYIRFASPDWEQRYRERIRSILASAGKRKVK VLWLGLPNMSRDKLNDGVHYLNRLYREEVAAGGGRFISTRETLGSQDDSFNKFMTLPDQGEVAVRTADGVHFTRQGQLLL ARRVLAELRFE
Specific function: Unknown
COG id: COG2845
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37001; Mature: 37001
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAAYPHRRILVILLSSMLLLFWLEQAAVNAYWRQTFHAPSLLERLDALSPWREGGSLGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCCCCC GLRRHSEALQQQVGSWDRRMIDSLNACCLKPKPSAQAAAAKPAAPKPQASAAVAAVKAVD HHHHHHHHHHHHHCHHHHHHHHHHHHEECCCCCCCCHHCCCCCCCCCCHHHHHHHHHHCC PRLALQEGLPVLLAGDSMMQGVALHLLPPLFRQHQVKAIDISKQSTGLTYPDFFNWPATI CHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHH ERQLAANPKTQLLVMFVGANDTWDMVNGNHYIRFASPDWEQRYRERIRSILASAGKRKVK HHHHHCCCCCEEEEEEECCCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEE VLWLGLPNMSRDKLNDGVHYLNRLYREEVAAGGGRFISTRETLGSQDDSFNKFMTLPDQG EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHCCCCCCCCHHEEECCCCC EVAVRTADGVHFTRQGQLLLARRVLAELRFE CEEEEECCCEEEECCCHHHHHHHHHHHHCCC >Mature Secondary Structure MLAAYPHRRILVILLSSMLLLFWLEQAAVNAYWRQTFHAPSLLERLDALSPWREGGSLGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCCCCC GLRRHSEALQQQVGSWDRRMIDSLNACCLKPKPSAQAAAAKPAAPKPQASAAVAAVKAVD HHHHHHHHHHHHHCHHHHHHHHHHHHEECCCCCCCCHHCCCCCCCCCCHHHHHHHHHHCC PRLALQEGLPVLLAGDSMMQGVALHLLPPLFRQHQVKAIDISKQSTGLTYPDFFNWPATI CHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHH ERQLAANPKTQLLVMFVGANDTWDMVNGNHYIRFASPDWEQRYRERIRSILASAGKRKVK HHHHHCCCCCEEEEEEECCCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEE VLWLGLPNMSRDKLNDGVHYLNRLYREEVAAGGGRFISTRETLGSQDDSFNKFMTLPDQG EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHCCCCCCCCHHEEECCCCC EVAVRTADGVHFTRQGQLLLARRVLAELRFE CEEEEECCCEEEECCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA