| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is leuE [H]
Identifier: 34499497
GI number: 34499497
Start: 4374920
End: 4375549
Strand: Reverse
Name: leuE [H]
Synonym: CV_4042
Alternate gene names: 34499497
Gene position: 4375549-4374920 (Counterclockwise)
Preceding gene: 34499500
Following gene: 34499496
Centisome position: 92.1
GC content: 70.0
Gene sequence:
>630_bases ATGCCCACCTTGTCCACTCTGCTGCTGTTCTCCCTCGCCTGTCTCGCGCTGGCCGCCACGCCCGGCCCCGACATGCTGCT GATCGCCAGCCGCAGCGCAGGGCAGGGCCTGCGCGCCGGCTTCGCCACCTTGTTCGGCATCCAGCTGGGCACCTATTGCC ACGCGCTGCTGGCGGCGCTGGGTCTGGCCCAGCTGTTCGTGCTGGTGCCGGTGGCCTACGACGCGGTGCGCGTCGCCGGC GCCGCCTACCTGCTTTACCTGGCCTGGACCACCTTGCGCAGCAACAGCGTGCTGCGCGCGGCCGATCCCGCCGCCGCCAA CCGGCCGCTGGCGCGCATCGCGCTGCAGGGGCTGACCACCAATCTGCTCAATCCCAAGATGGCGCTGTTCGTGCTGGCGC TGTTTCCGCAGTTCGTCGAGCCGCAGGCCGGTCCGGTGGCGCTGCAGATTATGTTGCTGGCTACGGTACTGAACGCGGTC GGCTTTGTCGTCAACGCGCTGGTGATCGTCGCCAGCAGCCGCATGGGCCGGATGCTGGCCGGCGGCGCGAGCGGGCGCTG GCCGCAATACCTGCTGGCGACGGTGTTTGGCGGGCTGGCTGTGCGCCTGCTGGCGGCGGGGCAGAAATAA
Upstream 100 bases:
>100_bases CTAAACGCCGCCGCCTATCAAACCATGGCGGCATGCTTGTTCGCGCCGGAATGATATCGGTATGATGAATCCCTTCCTCA CCGTTTGCGGAGCGCCGCGC
Downstream 100 bases:
>100_bases GCTGTTCTGACCCGGAGGACAGCGCTTAATCCCGCCCGGTTTTGCTCTACCATGGCTTATGACCGCCGTCCGCAATGGGC GGCGGCGGGCCGATGGAGAT
Product: amino acid efflux protein
Products: homoserine lactone [Periplasm]; Proton [Cytoplasm]; homoserine [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MPTLSTLLLFSLACLALAATPGPDMLLIASRSAGQGLRAGFATLFGIQLGTYCHALLAALGLAQLFVLVPVAYDAVRVAG AAYLLYLAWTTLRSNSVLRAADPAAANRPLARIALQGLTTNLLNPKMALFVLALFPQFVEPQAGPVALQIMLLATVLNAV GFVVNALVIVASSRMGRMLAGGASGRWPQYLLATVFGGLAVRLLAAGQK
Sequences:
>Translated_209_residues MPTLSTLLLFSLACLALAATPGPDMLLIASRSAGQGLRAGFATLFGIQLGTYCHALLAALGLAQLFVLVPVAYDAVRVAG AAYLLYLAWTTLRSNSVLRAADPAAANRPLARIALQGLTTNLLNPKMALFVLALFPQFVEPQAGPVALQIMLLATVLNAV GFVVNALVIVASSRMGRMLAGGASGRWPQYLLATVFGGLAVRLLAAGQK >Mature_208_residues PTLSTLLLFSLACLALAATPGPDMLLIASRSAGQGLRAGFATLFGIQLGTYCHALLAALGLAQLFVLVPVAYDAVRVAGA AYLLYLAWTTLRSNSVLRAADPAAANRPLARIALQGLTTNLLNPKMALFVLALFPQFVEPQAGPVALQIMLLATVLNAVG FVVNALVIVASSRMGRMLAGGASGRWPQYLLATVFGGLAVRLLAAGQK
Specific function: Exporter of leucine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI48994979, Length=199, Percent_Identity=29.1457286432161, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788099, Length=189, Percent_Identity=28.042328042328, Blast_Score=71, Evalue=4e-14, Organism=Escherichia coli, GI1786522, Length=119, Percent_Identity=31.9327731092437, Blast_Score=64, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 21715; Mature: 21584
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLSTLLLFSLACLALAATPGPDMLLIASRSAGQGLRAGFATLFGIQLGTYCHALLAAL CCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GLAQLFVLVPVAYDAVRVAGAAYLLYLAWTTLRSNSVLRAADPAAANRPLARIALQGLTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHH NLLNPKMALFVLALFPQFVEPQAGPVALQIMLLATVLNAVGFVVNALVIVASSRMGRMLA HHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGASGRWPQYLLATVFGGLAVRLLAAGQK CCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PTLSTLLLFSLACLALAATPGPDMLLIASRSAGQGLRAGFATLFGIQLGTYCHALLAAL CHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GLAQLFVLVPVAYDAVRVAGAAYLLYLAWTTLRSNSVLRAADPAAANRPLARIALQGLTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHH NLLNPKMALFVLALFPQFVEPQAGPVALQIMLLATVLNAVGFVVNALVIVASSRMGRMLA HHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGASGRWPQYLLATVFGGLAVRLLAAGQK CCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; homoserine [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + homoserine lactone [Cytoplasm] = Proton [Cytoplasm] + homoserine lactone [Periplasm] Proton [Periplasm] + homoserine [Cytoplasm] = Proton [Cytoplasm] + homoserine [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA