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The map label for this gene is petA [H]

Identifier: 34499463

GI number: 34499463

Start: 4334634

End: 4335218

Strand: Reverse

Name: petA [H]

Synonym: CV_4008

Alternate gene names: 34499463

Gene position: 4335218-4334634 (Counterclockwise)

Preceding gene: 34499464

Following gene: 34499462

Centisome position: 91.25

GC content: 62.91

Gene sequence:

>585_bases
ATGAGTGAACAACAAGTCGATACGGGGCGGCGTCGCTTTTTGACGATCGCTTCCAGCGCTGTTGGGGGTGTTGCGGTAGT
CGGCGCGGCCACGCCATTTTTCATGAGCTTTTTCCCGTCCGAGAGGGCGAAGGCCGCGGGGGCGCCGGTCGAGGTCGACA
TCGGCAAGATCGAAGCCGGCCAAAAGATCAACGTCGAATGGCGCGGCAAGCCGGTGTGGATTCTCAGCCGCACCCCGGAG
CAGATCAAGAACCTGCCCAAGAACGATCCCAAGCTGGTGGATCCCCAATCAGAAGTCGAGCAGCAGCCCAAGTACTGCCA
GAACGAGCATCGCTCCATCAAGCCGCAATTCCTGGTGGCGGTCGGCATCTGCACCCATCTGGGCTGTTCGCCGACCTTCC
GGCCCGACCTGGCGCCCGCCGACCTGGGGCCGGACTGGCTGGGAGGCTTCTACTGCCCCTGCCACGGTTCCAAGTTCGAC
CTGGCCGCCCGCGTGTTCAAGGGGGTGCCGGCGCCGAAGAACCTGGAAATCCCCCCGCACAAGTATCTGTCCGACACCCG
CCTGCTGATTGGCGACGACAAATAA

Upstream 100 bases:

>100_bases
TCTCGATCAATTTATTTGCATAGAAGCTTCAAGTCCCTACTAGTAATCGGGTAAAATCCTGCGGTTTAGGGCTCGATTTC
CACGATTGAGGATGACTGTA

Downstream 100 bases:

>100_bases
GCTGAGGGCGAAAAATGAGCAAGGCACAAAAGCTGCTTAACTGGGTGGACGCGCGATTCCCGCTGACCGCGCTGTGGGAA
AGCCAATGGGGCAAGTACGT

Product: ubiquinol-cytochrome c reductase

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSEQQVDTGRRRFLTIASSAVGGVAVVGAATPFFMSFFPSERAKAAGAPVEVDIGKIEAGQKINVEWRGKPVWILSRTPE
QIKNLPKNDPKLVDPQSEVEQQPKYCQNEHRSIKPQFLVAVGICTHLGCSPTFRPDLAPADLGPDWLGGFYCPCHGSKFD
LAARVFKGVPAPKNLEIPPHKYLSDTRLLIGDDK

Sequences:

>Translated_194_residues
MSEQQVDTGRRRFLTIASSAVGGVAVVGAATPFFMSFFPSERAKAAGAPVEVDIGKIEAGQKINVEWRGKPVWILSRTPE
QIKNLPKNDPKLVDPQSEVEQQPKYCQNEHRSIKPQFLVAVGICTHLGCSPTFRPDLAPADLGPDWLGGFYCPCHGSKFD
LAARVFKGVPAPKNLEIPPHKYLSDTRLLIGDDK
>Mature_193_residues
SEQQVDTGRRRFLTIASSAVGGVAVVGAATPFFMSFFPSERAKAAGAPVEVDIGKIEAGQKINVEWRGKPVWILSRTPEQ
IKNLPKNDPKLVDPQSEVEQQPKYCQNEHRSIKPQFLVAVGICTHLGCSPTFRPDLAPADLGPDWLGGFYCPCHGSKFDL
AARVFKGVPAPKNLEIPPHKYLSDTRLLIGDDK

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=197, Percent_Identity=34.010152284264, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17540418, Length=189, Percent_Identity=35.4497354497354, Blast_Score=97, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6320811, Length=184, Percent_Identity=35.8695652173913, Blast_Score=108, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24580896, Length=162, Percent_Identity=39.5061728395062, Blast_Score=113, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 21266; Mature: 21134

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQQVDTGRRRFLTIASSAVGGVAVVGAATPFFMSFFPSERAKAAGAPVEVDIGKIEAG
CCCCCCCCCHHEEEEECCCCCCCEEEECCCCHHHHHHCCCHHHHHCCCCEEEECCEECCC
QKINVEWRGKPVWILSRTPEQIKNLPKNDPKLVDPQSEVEQQPKYCQNEHRSIKPQFLVA
CEEEEEECCCEEEEEECCHHHHHCCCCCCCCCCCCHHHHHHCHHHHHHHHCCCCHHHHHH
VGICTHLGCSPTFRPDLAPADLGPDWLGGFYCPCHGSKFDLAARVFKGVPAPKNLEIPPH
HHHHHHCCCCCCCCCCCCCCCCCCHHCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCH
KYLSDTRLLIGDDK
HHCCCCEEEEECCC
>Mature Secondary Structure 
SEQQVDTGRRRFLTIASSAVGGVAVVGAATPFFMSFFPSERAKAAGAPVEVDIGKIEAG
CCCCCCCCHHEEEEECCCCCCCEEEECCCCHHHHHHCCCHHHHHCCCCEEEECCEECCC
QKINVEWRGKPVWILSRTPEQIKNLPKNDPKLVDPQSEVEQQPKYCQNEHRSIKPQFLVA
CEEEEEECCCEEEEEECCHHHHHCCCCCCCCCCCCHHHHHHCHHHHHHHHCCCCHHHHHH
VGICTHLGCSPTFRPDLAPADLGPDWLGGFYCPCHGSKFDLAARVFKGVPAPKNLEIPPH
HHHHHHCCCCCCCCCCCCCCCCCCHHCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCH
KYLSDTRLLIGDDK
HHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA