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The map label for this gene is petB [H]

Identifier: 34499462

GI number: 34499462

Start: 4333276

End: 4334619

Strand: Reverse

Name: petB [H]

Synonym: CV_4007

Alternate gene names: 34499462

Gene position: 4334619-4333276 (Counterclockwise)

Preceding gene: 34499463

Following gene: 34499461

Centisome position: 91.23

GC content: 63.02

Gene sequence:

>1344_bases
ATGAGCAAGGCACAAAAGCTGCTTAACTGGGTGGACGCGCGATTCCCGCTGACCGCGCTGTGGGAAAGCCAATGGGGCAA
GTACGTCGCGCCCAAGAATTTCAACTTCTGGTACTTCTTCGGTTCGCTGGCCATGCTGGTGCTGGTGCTGCAGATCGTCA
CCGGCATCTTCCTGACCATGAACTACAAGCCGGACGGCACCCTGAACGCCGCCGGCATCCCGGTCGCCTTCGCCTCGGTC
GAGTACATCATGCGCGACGTGGCAGGCGGCTGGATCATCCGCTACATGCACTCCACAGGCGCCTCGATGTTCTTCGTCGT
GGTTTACCTGCACATGTTCCGCGGCCTGATCTACGGATCGTACAAGCAGCCGCGCGAGCTGGTCTGGGTGTTCGGCACGC
TGATCTTCCTGTGCCTGATGGCCGAGGCCTTCATGGGCTACCTGCTGCCCTGGGGCCAGATGTCGTTCTGGGGCGCCCAG
GTGATCGTCAATCTGTTCGGCTCCATTCCGGTGATCGGCCCCGACCTGTCGGTGTGGATCCGCGGCGACTACGTGGTGTC
CGACGCCACGCTGAACCGCTTCTTCGCGCTGCACGTGATCGCGGTGCCGCTGGTGCTGCTGGCGCTGGTGGTGGCCCACC
TGATGGCGCTGCACGAGGTGGGCTCCAACAACCCGGACGGCGTGGAGATCAAGAAGCAGCCCAAGGACCCGAATACCGGC
CTGTACCTGGACGGCATCTACTCCCACCCGTACTACACCATCAAGGACATCCTCGGCGTGGTGGTGTTCATGATCGTGTT
CTCGGTGATCGTGTTCTTCCTGCCGGAAATGGGCGGCTACTTCCTGGAACATCCGAACTTCGACCAGGCAGACCCGTTGA
AGACGCCGCCGCACATCGCCCCGGTGTGGTACTTCACCCCGTTCTACGCGATTCTGCGCGCGGTGCCGTCGTTCGCCGGC
ACCCAGGTGTGGGGCGTGCTGGCGATGGGGGCGGCCGTGGTGCTGATCGCTTTCCTGCCGTGGCTGGACCGCTCGCCGAT
CAAGTCCATCCGCTACCGCGGTCCCAAGTTCAAGATCGCGCTGGTGCTGTTCATCGCCGCGTTCATCGGCCTGGGCATCC
TGGGCGCGATGCCGCCGACCGAAGTGCGCACGCTGATCTCGCAGATCTTCTCGGTGATCTACTTCGCCTTCTTCCTGGGC
ATGCCGTTCTATACCAAGAACGACGTGGGCAGCGTCCCGGTGCCGGAGCGCGTGACCGACACCAACGCCAAGCGCCAGAT
CCAGTTCGTGGCCATGGTGGCGCTGACCGTGTTCCTGGCCGCGCTGTTCGCCATGAACGTGTAA

Upstream 100 bases:

>100_bases
AGGGGGTGCCGGCGCCGAAGAACCTGGAAATCCCCCCGCACAAGTATCTGTCCGACACCCGCCTGCTGATTGGCGACGAC
AAATAAGCTGAGGGCGAAAA

Downstream 100 bases:

>100_bases
GCAAGGGGATAAGGAAAATGAACAACAAGATCCGTCACCTGATCGCCGCCGCGGCGCTGGCGCTGCCCTTCGCGATGCCG
GTCTTCGCCAACGAGGGCGG

Product: ubiquinol-cytochrome c reductase

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MSKAQKLLNWVDARFPLTALWESQWGKYVAPKNFNFWYFFGSLAMLVLVLQIVTGIFLTMNYKPDGTLNAAGIPVAFASV
EYIMRDVAGGWIIRYMHSTGASMFFVVVYLHMFRGLIYGSYKQPRELVWVFGTLIFLCLMAEAFMGYLLPWGQMSFWGAQ
VIVNLFGSIPVIGPDLSVWIRGDYVVSDATLNRFFALHVIAVPLVLLALVVAHLMALHEVGSNNPDGVEIKKQPKDPNTG
LYLDGIYSHPYYTIKDILGVVVFMIVFSVIVFFLPEMGGYFLEHPNFDQADPLKTPPHIAPVWYFTPFYAILRAVPSFAG
TQVWGVLAMGAAVVLIAFLPWLDRSPIKSIRYRGPKFKIALVLFIAAFIGLGILGAMPPTEVRTLISQIFSVIYFAFFLG
MPFYTKNDVGSVPVPERVTDTNAKRQIQFVAMVALTVFLAALFAMNV

Sequences:

>Translated_447_residues
MSKAQKLLNWVDARFPLTALWESQWGKYVAPKNFNFWYFFGSLAMLVLVLQIVTGIFLTMNYKPDGTLNAAGIPVAFASV
EYIMRDVAGGWIIRYMHSTGASMFFVVVYLHMFRGLIYGSYKQPRELVWVFGTLIFLCLMAEAFMGYLLPWGQMSFWGAQ
VIVNLFGSIPVIGPDLSVWIRGDYVVSDATLNRFFALHVIAVPLVLLALVVAHLMALHEVGSNNPDGVEIKKQPKDPNTG
LYLDGIYSHPYYTIKDILGVVVFMIVFSVIVFFLPEMGGYFLEHPNFDQADPLKTPPHIAPVWYFTPFYAILRAVPSFAG
TQVWGVLAMGAAVVLIAFLPWLDRSPIKSIRYRGPKFKIALVLFIAAFIGLGILGAMPPTEVRTLISQIFSVIYFAFFLG
MPFYTKNDVGSVPVPERVTDTNAKRQIQFVAMVALTVFLAALFAMNV
>Mature_446_residues
SKAQKLLNWVDARFPLTALWESQWGKYVAPKNFNFWYFFGSLAMLVLVLQIVTGIFLTMNYKPDGTLNAAGIPVAFASVE
YIMRDVAGGWIIRYMHSTGASMFFVVVYLHMFRGLIYGSYKQPRELVWVFGTLIFLCLMAEAFMGYLLPWGQMSFWGAQV
IVNLFGSIPVIGPDLSVWIRGDYVVSDATLNRFFALHVIAVPLVLLALVVAHLMALHEVGSNNPDGVEIKKQPKDPNTGL
YLDGIYSHPYYTIKDILGVVVFMIVFSVIVFFLPEMGGYFLEHPNFDQADPLKTPPHIAPVWYFTPFYAILRAVPSFAGT
QVWGVLAMGAAVVLIAFLPWLDRSPIKSIRYRGPKFKIALVLFIAAFIGLGILGAMPPTEVRTLISQIFSVIYFAFFLGM
PFYTKNDVGSVPVPERVTDTNAKRQIQFVAMVALTVFLAALFAMNV

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=384, Percent_Identity=43.4895833333333, Blast_Score=264, Evalue=1e-70,
Organism=Saccharomyces cerevisiae, GI6226529, Length=374, Percent_Identity=44.1176470588235, Blast_Score=266, Evalue=7e-72,
Organism=Saccharomyces cerevisiae, GI6226532, Length=249, Percent_Identity=46.9879518072289, Blast_Score=212, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6226531, Length=159, Percent_Identity=49.0566037735849, Blast_Score=151, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6226530, Length=143, Percent_Identity=48.2517482517483, Blast_Score=126, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 50075; Mature: 49944

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKAQKLLNWVDARFPLTALWESQWGKYVAPKNFNFWYFFGSLAMLVLVLQIVTGIFLTM
CHHHHHHHHHHCCCCHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE
NYKPDGTLNAAGIPVAFASVEYIMRDVAGGWIIRYMHSTGASMFFVVVYLHMFRGLIYGS
ECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
YKQPRELVWVFGTLIFLCLMAEAFMGYLLPWGQMSFWGAQVIVNLFGSIPVIGPDLSVWI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCCCEEEE
RGDYVVSDATLNRFFALHVIAVPLVLLALVVAHLMALHEVGSNNPDGVEIKKQPKDPNTG
ECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCC
LYLDGIYSHPYYTIKDILGVVVFMIVFSVIVFFLPEMGGYFLEHPNFDQADPLKTPPHIA
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PVWYFTPFYAILRAVPSFAGTQVWGVLAMGAAVVLIAFLPWLDRSPIKSIRYRGPKFKIA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHH
LVLFIAAFIGLGILGAMPPTEVRTLISQIFSVIYFAFFLGMPFYTKNDVGSVPVPERVTD
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
TNAKRQIQFVAMVALTVFLAALFAMNV
CCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA