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The map label for this gene is cyoA [H]

Identifier: 34499451

GI number: 34499451

Start: 4324029

End: 4324970

Strand: Reverse

Name: cyoA [H]

Synonym: CV_3996

Alternate gene names: 34499451

Gene position: 4324970-4324029 (Counterclockwise)

Preceding gene: 34499452

Following gene: 34499450

Centisome position: 91.03

GC content: 60.93

Gene sequence:

>942_bases
ATGAGAAACCATAGACCCTCCCGCCTGATGCGGGGACTGGCGCCTGTGGTGATCGCCCTGCTGTCGGGATGCCAAGGCGG
CATTCTCGATCCCAAGGGCCAGATCGCCGCTGAGCAGAAGTCCCTGATCCTGACGGCAACCGCGCTGATGCTGCTGGTGG
TCATCCCGGTGATCGTGATGACCTTGGTCTTCGCCTGGAAGTACCGCGCCGGCAACAAGGAAGCCGCCTACGAACCGAAA
TGGTCGCACTCGACCAAGATCGAAGTCGTGGTCTGGCTGATTCCCTGCATCATCATCGCCTTCCTGGCGACGCTGACCTG
GAAGAGCACGCACAAGCTCGACCCGTACCGTCCGCTGGAATCGGACAAGAAGGCGATCCAGGTGCAGGTGGTGGCGCTGA
ACTGGAAATGGTTGTTCATCTACCCCGAGCAGCAAATCGCTTCCGTCAACGAGCTGGTATTCCCGGCCGATACCCCGGTG
AGCTTCAAGATCACCTCCGACGCGGCGATGAACTCCTTCTTCATCCCGCAGCTGGGCGGCCAGATCTATGCGATGGCCGG
TATGCAGACCCAGTTGCATCTGATCGCCAACGAACCGGGCACCTACAAGGGCTTCTCCGCCAACTACAGCGGCGCCGGCT
TCTCCGGCATGAAGTTCAACGCCGTCGCCACCAAGACCCCGGCCGAATTCGACGCCTGGGTGGCCAAGGCCAAGGCTTCC
GGCCAGGCATTGGACGCGCCCGCGTACCTGAAGTTGCTCAAGCCTAGCGAAAACAATGCGGTGGAACACTACGCGTCGAC
CACGCCGTACCTGTTCGAGGCTGTGTTGCACAAGTACATGGCCGGCCGTCCGTCGCTGGCTGAAAGCGACGACGCCATCA
AGCTGACCAAGCTGACCAAAGAACTGTGCGCAGCCATCACCCCGCCGGTTGTCAAGGAGTAA

Upstream 100 bases:

>100_bases
CCGGTCCGGCAGGGAACTGTTTTCTTGGCGTTGGAGCATGGCTCGCAACGCCTGTTGCGCATCTGCGCGCCAAAGGATTT
TTAACCTGAAAAGTCGTAAG

Downstream 100 bases:

>100_bases
GCATCGATGTTGTTAGGTAAACTGACTCTGGACGCGATCCCGTTCCACGAGCCCATCATCATGGGGGCGCTGGGCGGCGC
CGGCCTGATCGGGCTGATGG

Product: cytochrome o ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Ubiquinol oxidase chain B; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MRNHRPSRLMRGLAPVVIALLSGCQGGILDPKGQIAAEQKSLILTATALMLLVVIPVIVMTLVFAWKYRAGNKEAAYEPK
WSHSTKIEVVVWLIPCIIIAFLATLTWKSTHKLDPYRPLESDKKAIQVQVVALNWKWLFIYPEQQIASVNELVFPADTPV
SFKITSDAAMNSFFIPQLGGQIYAMAGMQTQLHLIANEPGTYKGFSANYSGAGFSGMKFNAVATKTPAEFDAWVAKAKAS
GQALDAPAYLKLLKPSENNAVEHYASTTPYLFEAVLHKYMAGRPSLAESDDAIKLTKLTKELCAAITPPVVKE

Sequences:

>Translated_313_residues
MRNHRPSRLMRGLAPVVIALLSGCQGGILDPKGQIAAEQKSLILTATALMLLVVIPVIVMTLVFAWKYRAGNKEAAYEPK
WSHSTKIEVVVWLIPCIIIAFLATLTWKSTHKLDPYRPLESDKKAIQVQVVALNWKWLFIYPEQQIASVNELVFPADTPV
SFKITSDAAMNSFFIPQLGGQIYAMAGMQTQLHLIANEPGTYKGFSANYSGAGFSGMKFNAVATKTPAEFDAWVAKAKAS
GQALDAPAYLKLLKPSENNAVEHYASTTPYLFEAVLHKYMAGRPSLAESDDAIKLTKLTKELCAAITPPVVKE
>Mature_313_residues
MRNHRPSRLMRGLAPVVIALLSGCQGGILDPKGQIAAEQKSLILTATALMLLVVIPVIVMTLVFAWKYRAGNKEAAYEPK
WSHSTKIEVVVWLIPCIIIAFLATLTWKSTHKLDPYRPLESDKKAIQVQVVALNWKWLFIYPEQQIASVNELVFPADTPV
SFKITSDAAMNSFFIPQLGGQIYAMAGMQTQLHLIANEPGTYKGFSANYSGAGFSGMKFNAVATKTPAEFDAWVAKAKAS
GQALDAPAYLKLLKPSENNAVEHYASTTPYLFEAVLHKYMAGRPSLAESDDAIKLTKLTKELCAAITPPVVKE

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=268, Percent_Identity=63.0597014925373, Blast_Score=358, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 34325; Mature: 34325

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNHRPSRLMRGLAPVVIALLSGCQGGILDPKGQIAAEQKSLILTATALMLLVVIPVIVM
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TLVFAWKYRAGNKEAAYEPKWSHSTKIEVVVWLIPCIIIAFLATLTWKSTHKLDPYRPLE
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SDKKAIQVQVVALNWKWLFIYPEQQIASVNELVFPADTPVSFKITSDAAMNSFFIPQLGG
CCCCEEEEEEEEEEEEEEEEECHHHHHHHHHEEECCCCCEEEEEECCCCCCCEECHHCCC
QIYAMAGMQTQLHLIANEPGTYKGFSANYSGAGFSGMKFNAVATKTPAEFDAWVAKAKAS
EEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCC
GQALDAPAYLKLLKPSENNAVEHYASTTPYLFEAVLHKYMAGRPSLAESDDAIKLTKLTK
CCCCCCCHHEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
ELCAAITPPVVKE
HHHHHCCCCCCCC
>Mature Secondary Structure
MRNHRPSRLMRGLAPVVIALLSGCQGGILDPKGQIAAEQKSLILTATALMLLVVIPVIVM
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TLVFAWKYRAGNKEAAYEPKWSHSTKIEVVVWLIPCIIIAFLATLTWKSTHKLDPYRPLE
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SDKKAIQVQVVALNWKWLFIYPEQQIASVNELVFPADTPVSFKITSDAAMNSFFIPQLGG
CCCCEEEEEEEEEEEEEEEEECHHHHHHHHHEEECCCCCEEEEEECCCCCCCEECHHCCC
QIYAMAGMQTQLHLIANEPGTYKGFSANYSGAGFSGMKFNAVATKTPAEFDAWVAKAKAS
EEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCC
GQALDAPAYLKLLKPSENNAVEHYASTTPYLFEAVLHKYMAGRPSLAESDDAIKLTKLTK
CCCCCCCHHEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
ELCAAITPPVVKE
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]