Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34499359

Identifier: 34499359

GI number: 34499359

Start: 4215622

End: 4216818

Strand: Reverse

Name: 34499359

Synonym: CV_3904

Alternate gene names: NA

Gene position: 4216818-4215622 (Counterclockwise)

Preceding gene: 34499361

Following gene: 34499358

Centisome position: 88.75

GC content: 68.17

Gene sequence:

>1197_bases
ATGAGCGAATTGCAGATTGGTGTATTGATATTGGGCGGCGGCGTGATCGCCCTGGTTGTCGGTTTCAACGTGTTCCAGGA
ATGGCGTTTCCGCAAGCGGACGCAGCAGGCGTTCGCGCGCGCCCATGATGACGTATTGCTGGACGTTCCCAAGAACAATG
TCCGCGACGGCGTGCGAGCCGACAGGATGGAGCCGGTGCTGGTGGACGCGGAGCTGGAGCCGGAGGATGACGCGCTGGCG
TTCGAGCCGCAGTTTCCCGAACAGGCGCCCGTCGCCCGCGAGCCGGCCGCGCATCCTGCCAGACAGGAGCCGGCCGCGCC
GCAGTTCGACGTGCCGGTGATAGACGAGGAGGACGAGGCCGAGCTGGCGATGGACTCCGCCGACCACCAGGCGCTGGTGG
TCGCGATGCTGGATCCGTCGCTGGACTTCATCGCCGAGGTGGTGTTCCACGAGCCGCACGAGCTGGCCGCGATGCCGCGC
TTCAACGTCGGCAAGCGCACCCAACTGATCGGCCGCACCGAACGCGGCCTGTGGAAGGTGGCCGAGGCGCTGCCGGGCAC
CCGCTACAAGCAGATCAACGTCAGCATGCAGATGGTGGACCGCTCCGGCGCGGTGACCGAGCAGGAGCTCGCCGCCTTCT
GCCAGCAGGTGTCGCGCTTCGCCGAGGACCATGACGCCGCCGTCAGCTTCCCGCAGCGCCAGCAGAAGCTGGTGGCCGCG
CGCGAGCTGGACCGCTTCTGCGCCGACGTCGACGTGCTGATCGGCATCAACATCGTGCCCCGATCGGCCATCGAGGGCGC
GCGCCTGCGCAGCTTCGCCGAGGCGGCCGGACTGCAGCTGGAGCCGGACGGCGCCTTCCACTACCTGGCCGATTCCGGCA
ATACTCTCTATTCGCTGGTGGCTGCCGACCAGATGCCGTTCACTTTCCACACGCTGCTGGACAAGTCCTTCCCGGCGCTG
ACGCTGTTGTTCGACGTGCCACGCGTCGCCGGCGGCGTCGACGTGTTCGACCGCGCCGTGCATTTCGCGCGCCAGCTGGC
GCAGGAGTTCGACGCCCAGCTGGTGGACGACAACCGCCGCGTGCTGAGCGAGACGGGGCTGGCCCGCATCCGCGACCAGC
TGCTGCACATCTATGGCAGCATGGACGACCGCGGCATCGCGCCGGGCAGCGTGGCGGCCCTGCGCCTGTTCGCCTGA

Upstream 100 bases:

>100_bases
GGGCGATCGGCGCGGGGCGCGGCGTCAGGGCGCTTGTTTACCGGCTCTTGATGGTTTTGGACAGGCGGCTTCGATTATTC
GCCTTAATGCGGACTGGCTA

Downstream 100 bases:

>100_bases
ACGATGATTTGACGATACCCGGGGCCGGCTTTGCCGGCCCTTTTGCCGTTCGAGAGTTTCCGATGACCGCAAATGAATTG
CGCGCAGCCGAGCTGCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MSELQIGVLILGGGVIALVVGFNVFQEWRFRKRTQQAFARAHDDVLLDVPKNNVRDGVRADRMEPVLVDAELEPEDDALA
FEPQFPEQAPVAREPAAHPARQEPAAPQFDVPVIDEEDEAELAMDSADHQALVVAMLDPSLDFIAEVVFHEPHELAAMPR
FNVGKRTQLIGRTERGLWKVAEALPGTRYKQINVSMQMVDRSGAVTEQELAAFCQQVSRFAEDHDAAVSFPQRQQKLVAA
RELDRFCADVDVLIGINIVPRSAIEGARLRSFAEAAGLQLEPDGAFHYLADSGNTLYSLVAADQMPFTFHTLLDKSFPAL
TLLFDVPRVAGGVDVFDRAVHFARQLAQEFDAQLVDDNRRVLSETGLARIRDQLLHIYGSMDDRGIAPGSVAALRLFA

Sequences:

>Translated_398_residues
MSELQIGVLILGGGVIALVVGFNVFQEWRFRKRTQQAFARAHDDVLLDVPKNNVRDGVRADRMEPVLVDAELEPEDDALA
FEPQFPEQAPVAREPAAHPARQEPAAPQFDVPVIDEEDEAELAMDSADHQALVVAMLDPSLDFIAEVVFHEPHELAAMPR
FNVGKRTQLIGRTERGLWKVAEALPGTRYKQINVSMQMVDRSGAVTEQELAAFCQQVSRFAEDHDAAVSFPQRQQKLVAA
RELDRFCADVDVLIGINIVPRSAIEGARLRSFAEAAGLQLEPDGAFHYLADSGNTLYSLVAADQMPFTFHTLLDKSFPAL
TLLFDVPRVAGGVDVFDRAVHFARQLAQEFDAQLVDDNRRVLSETGLARIRDQLLHIYGSMDDRGIAPGSVAALRLFA
>Mature_397_residues
SELQIGVLILGGGVIALVVGFNVFQEWRFRKRTQQAFARAHDDVLLDVPKNNVRDGVRADRMEPVLVDAELEPEDDALAF
EPQFPEQAPVAREPAAHPARQEPAAPQFDVPVIDEEDEAELAMDSADHQALVVAMLDPSLDFIAEVVFHEPHELAAMPRF
NVGKRTQLIGRTERGLWKVAEALPGTRYKQINVSMQMVDRSGAVTEQELAAFCQQVSRFAEDHDAAVSFPQRQQKLVAAR
ELDRFCADVDVLIGINIVPRSAIEGARLRSFAEAAGLQLEPDGAFHYLADSGNTLYSLVAADQMPFTFHTLLDKSFPALT
LLFDVPRVAGGVDVFDRAVHFARQLAQEFDAQLVDDNRRVLSETGLARIRDQLLHIYGSMDDRGIAPGSVAALRLFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44014; Mature: 43883

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELQIGVLILGGGVIALVVGFNVFQEWRFRKRTQQAFARAHDDVLLDVPKNNVRDGVRA
CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHCCCHH
DRMEPVLVDAELEPEDDALAFEPQFPEQAPVAREPAAHPARQEPAAPQFDVPVIDEEDEA
CCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
ELAMDSADHQALVVAMLDPSLDFIAEVVFHEPHELAAMPRFNVGKRTQLIGRTERGLWKV
HHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHCCHHHHHHHH
AEALPGTRYKQINVSMQMVDRSGAVTEQELAAFCQQVSRFAEDHDAAVSFPQRQQKLVAA
HHHCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHH
RELDRFCADVDVLIGINIVPRSAIEGARLRSFAEAAGLQLEPDGAFHYLADSGNTLYSLV
HHHHHHHCCCEEEEEEEECCCHHHCHHHHHHHHHHCCCEECCCCCEEEEECCCCEEEEEE
AADQMPFTFHTLLDKSFPALTLLFDVPRVAGGVDVFDRAVHFARQLAQEFDAQLVDDNRR
ECCCCCHHHHHHHCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHCCCHH
VLSETGLARIRDQLLHIYGSMDDRGIAPGSVAALRLFA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEECC
>Mature Secondary Structure 
SELQIGVLILGGGVIALVVGFNVFQEWRFRKRTQQAFARAHDDVLLDVPKNNVRDGVRA
CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHCCCHH
DRMEPVLVDAELEPEDDALAFEPQFPEQAPVAREPAAHPARQEPAAPQFDVPVIDEEDEA
CCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
ELAMDSADHQALVVAMLDPSLDFIAEVVFHEPHELAAMPRFNVGKRTQLIGRTERGLWKV
HHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHCCHHHHHHHH
AEALPGTRYKQINVSMQMVDRSGAVTEQELAAFCQQVSRFAEDHDAAVSFPQRQQKLVAA
HHHCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHH
RELDRFCADVDVLIGINIVPRSAIEGARLRSFAEAAGLQLEPDGAFHYLADSGNTLYSLV
HHHHHHHCCCEEEEEEEECCCHHHCHHHHHHHHHHCCCEECCCCCEEEEECCCCEEEEEE
AADQMPFTFHTLLDKSFPALTLLFDVPRVAGGVDVFDRAVHFARQLAQEFDAQLVDDNRR
ECCCCCHHHHHHHCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHCCCHH
VLSETGLARIRDQLLHIYGSMDDRGIAPGSVAALRLFA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA