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The map label for this gene is 34499320

Identifier: 34499320

GI number: 34499320

Start: 4168930

End: 4170546

Strand: Reverse

Name: 34499320

Synonym: CV_3865

Alternate gene names: NA

Gene position: 4170546-4168930 (Counterclockwise)

Preceding gene: 34499322

Following gene: 34499304

Centisome position: 87.78

GC content: 47.31

Gene sequence:

>1617_bases
ATGCATAAGAACGGAAAGAAATATGGCGTCCTGATCACGGATGTGCCTCTTGGCGTATTGACAATAAGCGCTTGGCTGAA
AGAAAAGTGCGACACTGAAGTCAGGGTAGTCGATTTCAATACGGAAATACATAAAACATGGGATGATCCACAGGCCACTT
CATTCCATGCCTGGTTTGAGCAGGTATTTATAAAAATCAAGCAGTCCGGGTTTGAGCCGGATGTGATAGGTTTTTCATCC
TTGTTTATTACCGGCTATGATAATCTCCTCGCCCTGGCCGATGTTGCCAGCATGGTCTTTCCTGCCGCATTCAGGATCTG
CGGCGGCAACTTGCCGACAACCATGTATAGAGAAATTTTCTCTGACAAACCAGAGGCATTTGACGCGCTTTGCTTCGGAG
AAGGGGAATTACCTATTTCGGAGTTGATGGCGGCGGATGACAAGGCTGCCTATTGCAATGGTTCGAGTCAGTGGGTCACG
CATGAAAATTTGAAATCAGGTGGGATTTATCAGCATAACTTCATTTCAAACCTGGACGATATTCCTGACCTGGATTACGA
CTGCATCGATTTGACGGACTATCACCTGAATCCGACTATCAAAGCCTATACATCAATAGGCGATAGAACAAACTATATTA
CTTATATGGGGAGTCGTGGCTGTCCATTTCATTGCACATTTTGCGCCGCGCATACCGTGCATGGACGAAAAATGCGCAGC
TTCACCATAGACAGGATAGAGCGTGAACTGTCAGGGTTGTGCGATAAGTATGCGCCAAACACGCTGGTTATCGAGGATGA
CATGTTCCTGTGGGACAAGAGCTGGGCTACCAGCGTTTTGAAGATCGCACAGAAATTGAAGCTGACCTGTTTCTTTCCAA
ATGCGCTTGCCTTGTATGCTTTGGATCGCCCCATGCTGGAGGAATTGCACCGAACGGGCGTCAGACAGTTGACTCTTGCG
GTGGAGTCCGGCAGCGCCAGGGTATTGAAAGAGGTGATGAAGAAACCGTTGAAATTGTCTATCACGAACCGGGTGGTCGA
GGATTGCCGGGATCTGGGAATTTATACCGACTGCAATATCATCATCGGCATGCCCGGTGAAACATTAAATGATATCAAAG
ACACCCGAGAGTTTTTGAAGTCACTGGATGCGAACTGGTATCGGATAAACGTTGCCACGCCATTGGCGGGCAGTGAAATG
TATATCAAGGCAGTCAAAAATGGACAGATAAAAGGCGATATCAGGATGGCAGGCTACAAAAAGTGCGTAGTCGAAACCAA
GGATTTTACGCCTGCGCAAATAGAATCGATCGCATACGATATTAATTTGGAAATGAATTTCCTGAGAAATTCAGATATTA
AGTATGGAAATTATGAGAGAGCGTTGGAAACGTTCGAAAATGTCTTGTTGCTGCGCAATGACCATGCTCTGGCTATGTAC
AAAGTCATCGAATGCAAGAGGCTGATGGGGGATAGCCAAGGGAGTGAGGCTTTATCGGCGCGGTTGCAAGAGATGATCGA
TGCGAGTCCTTTTTGGACGCAGTATTTCCAGGACCATGCTCTGACTGCGCAAGACTTCAGCGCGGACAGTTTGCCGGCGG
AGCTGAAGGCAGGGTGA

Upstream 100 bases:

>100_bases
GTCAGCGAGGTCGGCAATGTCTTCCAAGTGTTTACTGATTATTCCGCCCAACATCACGTTCGAGGCTTTTGTCAATCCAT
CTTCAAACAGCAAGTATTGG

Downstream 100 bases:

>100_bases
GATTGAGTATTTTCTTTTCTTGCCGACTGAATAAAAGAGCCGCCTCGTGATCAAGGCGGCTCTTTGCGTTCCCAAGAGAG
GTATTTTACTCGATGTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MHKNGKKYGVLITDVPLGVLTISAWLKEKCDTEVRVVDFNTEIHKTWDDPQATSFHAWFEQVFIKIKQSGFEPDVIGFSS
LFITGYDNLLALADVASMVFPAAFRICGGNLPTTMYREIFSDKPEAFDALCFGEGELPISELMAADDKAAYCNGSSQWVT
HENLKSGGIYQHNFISNLDDIPDLDYDCIDLTDYHLNPTIKAYTSIGDRTNYITYMGSRGCPFHCTFCAAHTVHGRKMRS
FTIDRIERELSGLCDKYAPNTLVIEDDMFLWDKSWATSVLKIAQKLKLTCFFPNALALYALDRPMLEELHRTGVRQLTLA
VESGSARVLKEVMKKPLKLSITNRVVEDCRDLGIYTDCNIIIGMPGETLNDIKDTREFLKSLDANWYRINVATPLAGSEM
YIKAVKNGQIKGDIRMAGYKKCVVETKDFTPAQIESIAYDINLEMNFLRNSDIKYGNYERALETFENVLLLRNDHALAMY
KVIECKRLMGDSQGSEALSARLQEMIDASPFWTQYFQDHALTAQDFSADSLPAELKAG

Sequences:

>Translated_538_residues
MHKNGKKYGVLITDVPLGVLTISAWLKEKCDTEVRVVDFNTEIHKTWDDPQATSFHAWFEQVFIKIKQSGFEPDVIGFSS
LFITGYDNLLALADVASMVFPAAFRICGGNLPTTMYREIFSDKPEAFDALCFGEGELPISELMAADDKAAYCNGSSQWVT
HENLKSGGIYQHNFISNLDDIPDLDYDCIDLTDYHLNPTIKAYTSIGDRTNYITYMGSRGCPFHCTFCAAHTVHGRKMRS
FTIDRIERELSGLCDKYAPNTLVIEDDMFLWDKSWATSVLKIAQKLKLTCFFPNALALYALDRPMLEELHRTGVRQLTLA
VESGSARVLKEVMKKPLKLSITNRVVEDCRDLGIYTDCNIIIGMPGETLNDIKDTREFLKSLDANWYRINVATPLAGSEM
YIKAVKNGQIKGDIRMAGYKKCVVETKDFTPAQIESIAYDINLEMNFLRNSDIKYGNYERALETFENVLLLRNDHALAMY
KVIECKRLMGDSQGSEALSARLQEMIDASPFWTQYFQDHALTAQDFSADSLPAELKAG
>Mature_538_residues
MHKNGKKYGVLITDVPLGVLTISAWLKEKCDTEVRVVDFNTEIHKTWDDPQATSFHAWFEQVFIKIKQSGFEPDVIGFSS
LFITGYDNLLALADVASMVFPAAFRICGGNLPTTMYREIFSDKPEAFDALCFGEGELPISELMAADDKAAYCNGSSQWVT
HENLKSGGIYQHNFISNLDDIPDLDYDCIDLTDYHLNPTIKAYTSIGDRTNYITYMGSRGCPFHCTFCAAHTVHGRKMRS
FTIDRIERELSGLCDKYAPNTLVIEDDMFLWDKSWATSVLKIAQKLKLTCFFPNALALYALDRPMLEELHRTGVRQLTLA
VESGSARVLKEVMKKPLKLSITNRVVEDCRDLGIYTDCNIIIGMPGETLNDIKDTREFLKSLDANWYRINVATPLAGSEM
YIKAVKNGQIKGDIRMAGYKKCVVETKDFTPAQIESIAYDINLEMNFLRNSDIKYGNYERALETFENVLLLRNDHALAMY
KVIECKRLMGDSQGSEALSARLQEMIDASPFWTQYFQDHALTAQDFSADSLPAELKAG

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 60753; Mature: 60753

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKNGKKYGVLITDVPLGVLTISAWLKEKCDTEVRVVDFNTEIHKTWDDPQATSFHAWFE
CCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCCCCHHHHHHH
QVFIKIKQSGFEPDVIGFSSLFITGYDNLLALADVASMVFPAAFRICGGNLPTTMYREIF
HHHHHHHHCCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SDKPEAFDALCFGEGELPISELMAADDKAAYCNGSSQWVTHENLKSGGIYQHNFISNLDD
CCCCCHHHEEEECCCCCCHHHHHHCCCCCEEECCCCCEEECCCCCCCCCEEHHHHCCCCC
IPDLDYDCIDLTDYHLNPTIKAYTSIGDRTNYITYMGSRGCPFHCTFCAAHTVHGRKMRS
CCCCCCCEEECEECCCCCCCEEHHCCCCCCCEEEEECCCCCCEEEEEHHHHHHCCCHHHH
FTIDRIERELSGLCDKYAPNTLVIEDDMFLWDKSWATSVLKIAQKLKLTCFFPNALALYA
HHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCHHHHHHHHHHHHHEEEEECCCHHEEHH
LDRPMLEELHRTGVRQLTLAVESGSARVLKEVMKKPLKLSITNRVVEDCRDLGIYTDCNI
CCCHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHCCCEEEHHHHHHHHHHHCCCEECCEE
IIGMPGETLNDIKDTREFLKSLDANWYRINVATPLAGSEMYIKAVKNGQIKGDIRMAGYK
EEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCE
KCVVETKDFTPAQIESIAYDINLEMNFLRNSDIKYGNYERALETFENVLLLRNDHALAMY
EEEEECCCCCHHHHHHEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHEEEEECCCHHHHH
KVIECKRLMGDSQGSEALSARLQEMIDASPFWTQYFQDHALTAQDFSADSLPAELKAG
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHKNGKKYGVLITDVPLGVLTISAWLKEKCDTEVRVVDFNTEIHKTWDDPQATSFHAWFE
CCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCCCCHHHHHHH
QVFIKIKQSGFEPDVIGFSSLFITGYDNLLALADVASMVFPAAFRICGGNLPTTMYREIF
HHHHHHHHCCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SDKPEAFDALCFGEGELPISELMAADDKAAYCNGSSQWVTHENLKSGGIYQHNFISNLDD
CCCCCHHHEEEECCCCCCHHHHHHCCCCCEEECCCCCEEECCCCCCCCCEEHHHHCCCCC
IPDLDYDCIDLTDYHLNPTIKAYTSIGDRTNYITYMGSRGCPFHCTFCAAHTVHGRKMRS
CCCCCCCEEECEECCCCCCCEEHHCCCCCCCEEEEECCCCCCEEEEEHHHHHHCCCHHHH
FTIDRIERELSGLCDKYAPNTLVIEDDMFLWDKSWATSVLKIAQKLKLTCFFPNALALYA
HHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCHHHHHHHHHHHHHEEEEECCCHHEEHH
LDRPMLEELHRTGVRQLTLAVESGSARVLKEVMKKPLKLSITNRVVEDCRDLGIYTDCNI
CCCHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHCCCEEEHHHHHHHHHHHCCCEECCEE
IIGMPGETLNDIKDTREFLKSLDANWYRINVATPLAGSEMYIKAVKNGQIKGDIRMAGYK
EEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCE
KCVVETKDFTPAQIESIAYDINLEMNFLRNSDIKYGNYERALETFENVLLLRNDHALAMY
EEEEECCCCCHHHHHHEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHEEEEECCCHHHHH
KVIECKRLMGDSQGSEALSARLQEMIDASPFWTQYFQDHALTAQDFSADSLPAELKAG
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]