| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499322
Identifier: 34499322
GI number: 34499322
Start: 4172785
End: 4173231
Strand: Reverse
Name: 34499322
Synonym: CV_3867
Alternate gene names: NA
Gene position: 4173231-4172785 (Counterclockwise)
Preceding gene: 34499323
Following gene: 34499320
Centisome position: 87.84
GC content: 64.43
Gene sequence:
>447_bases ATGAGATCGATCAGTTGCTTATTGTGCGCGGCGTTCGTGTTGGCGGGATCGGCAGCGTGGTCTGCGTCAGGCGGGCACGG AGGCGGCCATGGGCAGGGCGAGGGAAACGGCGCTGCCCATGCGGGAATGAGGGCGGCGGATGCGGGCAAGAGCGTCTCGG ATAAGCTGGCCAAGGATTCCAGGCTGTCCGCCGGCTTGGCCGCGAAATTGCCGCCAGGCACCGATCTGCAGCAAGCCGCC GCCGGTTTTCGCAATCTGGGGAGTTTTGTGGCCGCGGTCCATGTCTGCAGCAATCTCGGGATTTCCTTTAGCGAACTCAA AGGCAAGATGATGTCCGGCGATTCATTAGGCCAGGCCATTCATGCGTTGAAGCCTGGAGTGGACGCCGACGCGGCTGCGC GCAAGGCGCGAAGCCAGGCGCGCGTCGAACTGGCCGCCGCGCGCTGA
Upstream 100 bases:
>100_bases GAGATGAGTATTTGTTAAGATATTGTTTGGTAAGGAATTTTTTACATTTCGCCATATCCAATCACTTCACCCAATCCGGC ACGGGATGGAGGAGTGAGCG
Downstream 100 bases:
>100_bases CCGCATCGTTTTTCCAGGCGGAGGCTGAGCGCCTCCGCCATCGTTTTGCCGCCTGCCGGAGCCGCGCTCACAATTTGAAG CGGGCGGTGACATGCTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MRSISCLLCAAFVLAGSAAWSASGGHGGGHGQGEGNGAAHAGMRAADAGKSVSDKLAKDSRLSAGLAAKLPPGTDLQQAA AGFRNLGSFVAAVHVCSNLGISFSELKGKMMSGDSLGQAIHALKPGVDADAAARKARSQARVELAAAR
Sequences:
>Translated_148_residues MRSISCLLCAAFVLAGSAAWSASGGHGGGHGQGEGNGAAHAGMRAADAGKSVSDKLAKDSRLSAGLAAKLPPGTDLQQAA AGFRNLGSFVAAVHVCSNLGISFSELKGKMMSGDSLGQAIHALKPGVDADAAARKARSQARVELAAAR >Mature_148_residues MRSISCLLCAAFVLAGSAAWSASGGHGGGHGQGEGNGAAHAGMRAADAGKSVSDKLAKDSRLSAGLAAKLPPGTDLQQAA AGFRNLGSFVAAVHVCSNLGISFSELKGKMMSGDSLGQAIHALKPGVDADAAARKARSQARVELAAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14640; Mature: 14640
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSISCLLCAAFVLAGSAAWSASGGHGGGHGQGEGNGAAHAGMRAADAGKSVSDKLAKDS CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHCCCHHHHHHHHHH RLSAGLAAKLPPGTDLQQAAAGFRNLGSFVAAVHVCSNLGISFSELKGKMMSGDSLGQAI HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHCCCHHHHHHH HALKPGVDADAAARKARSQARVELAAAR HHHCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRSISCLLCAAFVLAGSAAWSASGGHGGGHGQGEGNGAAHAGMRAADAGKSVSDKLAKDS CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHCCCHHHHHHHHHH RLSAGLAAKLPPGTDLQQAAAGFRNLGSFVAAVHVCSNLGISFSELKGKMMSGDSLGQAI HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHCCCHHHHHHH HALKPGVDADAAARKARSQARVELAAAR HHHCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA