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The map label for this gene is por [H]

Identifier: 34499284

GI number: 34499284

Start: 4127652

End: 4128758

Strand: Reverse

Name: por [H]

Synonym: CV_3829

Alternate gene names: 34499284

Gene position: 4128758-4127652 (Counterclockwise)

Preceding gene: 34499285

Following gene: 34499283

Centisome position: 86.9

GC content: 55.47

Gene sequence:

>1107_bases
ATGAACAAGAAGCTCATCGCCTTGGCGCTGGCAGCCCTGCCCGCGGCCGCCATGGCAGACGTGACCATCTACGGTCAGAT
TCGTGGCGGTTATGAGTACAACAAGACTTATAACTCCACGCTGAGCAAGGATGCTAACGGCAAACCCCAGGGCAGCTCCG
AGATCAATGACTGGACTTCGCGTCTGGGCTTCAAGGGCGGCGAAAGTCTGGGCAATGGCCTGAAGGCGATCTGGCAGGTG
GAAAGCGCGATCAGTGTTGATGGCACCAACTCCACTGGTTTCGGCACGCGCGACACCTTTATCGGCTTGGCCGGCGACAG
CTGGGGCCAGGTTCGCTTGGGCCGCCTGTCCAACTATCCGAACATGGATATGGAGCAGGTGGATCCGGGCTACTACAGCT
CGCAAAGCGTAGGCGGCTTGGGCATGTTCACTCGCTTGGATACTCGAGTGAACAACTCCATACGCTATGACAGCCCGAAT
TGGTCTGGCTTCAGCTATATGGCCTTGTGGGGTGTTGATGAAGCCAGAAATGTAGCGACTGACGGCTCTGGTTCTCGCAC
CAACAATCAACTGATCAACATCGGTTTGAGCTACGAGAATTCGGGCTACTTTGCCAAGTACAGTTTCGTCAATATGGGCG
ACTCCAACAAGCTTGGGGCGGGGCTGAAGGATTGGCATCGCTTGGAGGCGGGTTACAACGCCAACAATATTTATGCCGCG
TTTGGTTATCAGCAAGTTCGCGGTTATGTGGGCGGAGTGGCTGGAGCATATTCCGATACGACTGGCGTGCTGTATAACGT
AAAGGCGTTGAATGCCAGTGGTTCGTCCCTTGGTTCCAATCAGCAGGTTAAGACCAAAGAGCTGGCTTTGACTGGCGGCT
ATACCTTTGGTGCGTTTACTCCCTACCTGAGCTATGCCAAGGGGTATGACCTCAGCGCCGGCGGAAATACCGTCTCCAAG
TCTGGTTATGACCAGTTCGTGCTGGGTCTGGACTACGCGCTGTCCAAGCGCACCGATGTTTACACTTCTTACGGCCATGT
GAACTGGAAGGCCGATGGCGTTGCCAGCGAAAGCTCCTTCGGCCTGGGCCTGATCCACCGCTTCTAA

Upstream 100 bases:

>100_bases
CAGCGATCGACGGAATATACCGTCGGCACATAAATGTCCGGGCAAACGGCTCAGCCGGGAAGCCAACAGGACAAAATCAA
CTGACTTGAAAGGATCTGCA

Downstream 100 bases:

>100_bases
TAAGCAGTATCTGCTTGGTCTGAAAAGGGCTGCCTCGGCAGCCCTTTTTTTGTCCAAGCCGCCGGGAAGCCTTGATAGAC
AGGGATTTGCCAGCCCGATT

Product: outer membrane porin

Products: NA

Alternate protein names: PIB; Protein IB; Porin [H]

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MNKKLIALALAALPAAAMADVTIYGQIRGGYEYNKTYNSTLSKDANGKPQGSSEINDWTSRLGFKGGESLGNGLKAIWQV
ESAISVDGTNSTGFGTRDTFIGLAGDSWGQVRLGRLSNYPNMDMEQVDPGYYSSQSVGGLGMFTRLDTRVNNSIRYDSPN
WSGFSYMALWGVDEARNVATDGSGSRTNNQLINIGLSYENSGYFAKYSFVNMGDSNKLGAGLKDWHRLEAGYNANNIYAA
FGYQQVRGYVGGVAGAYSDTTGVLYNVKALNASGSSLGSNQQVKTKELALTGGYTFGAFTPYLSYAKGYDLSAGGNTVSK
SGYDQFVLGLDYALSKRTDVYTSYGHVNWKADGVASESSFGLGLIHRF

Sequences:

>Translated_368_residues
MNKKLIALALAALPAAAMADVTIYGQIRGGYEYNKTYNSTLSKDANGKPQGSSEINDWTSRLGFKGGESLGNGLKAIWQV
ESAISVDGTNSTGFGTRDTFIGLAGDSWGQVRLGRLSNYPNMDMEQVDPGYYSSQSVGGLGMFTRLDTRVNNSIRYDSPN
WSGFSYMALWGVDEARNVATDGSGSRTNNQLINIGLSYENSGYFAKYSFVNMGDSNKLGAGLKDWHRLEAGYNANNIYAA
FGYQQVRGYVGGVAGAYSDTTGVLYNVKALNASGSSLGSNQQVKTKELALTGGYTFGAFTPYLSYAKGYDLSAGGNTVSK
SGYDQFVLGLDYALSKRTDVYTSYGHVNWKADGVASESSFGLGLIHRF
>Mature_368_residues
MNKKLIALALAALPAAAMADVTIYGQIRGGYEYNKTYNSTLSKDANGKPQGSSEINDWTSRLGFKGGESLGNGLKAIWQV
ESAISVDGTNSTGFGTRDTFIGLAGDSWGQVRLGRLSNYPNMDMEQVDPGYYSSQSVGGLGMFTRLDTRVNNSIRYDSPN
WSGFSYMALWGVDEARNVATDGSGSRTNNQLINIGLSYENSGYFAKYSFVNMGDSNKLGAGLKDWHRLEAGYNANNIYAA
FGYQQVRGYVGGVAGAYSDTTGVLYNVKALNASGSSLGSNQQVKTKELALTGGYTFGAFTPYLSYAKGYDLSAGGNTVSK
SGYDQFVLGLDYALSKRTDVYTSYGHVNWKADGVASESSFGLGLIHRF

Specific function: Serves as a slightly cation selective porin [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Gram-negative porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013793
- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39531; Mature: 39531

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLIALALAALPAAAMADVTIYGQIRGGYEYNKTYNSTLSKDANGKPQGSSEINDWTS
CCCCEEEHHHHHCCHHHHEEEEEEEEEECCEEECCCCCCHHCCCCCCCCCCCCHHHHHHH
RLGFKGGESLGNGLKAIWQVESAISVDGTNSTGFGTRDTFIGLAGDSWGQVRLGRLSNYP
HHCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCC
NMDMEQVDPGYYSSQSVGGLGMFTRLDTRVNNSIRYDSPNWSGFSYMALWGVDEARNVAT
CCCHHHCCCCCCCCCCCCCEEHHEEHHHHHCCCEEECCCCCCCEEEEEEECCCHHHCCCC
DGSGSRTNNQLINIGLSYENSGYFAKYSFVNMGDSNKLGAGLKDWHRLEAGYNANNIYAA
CCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEE
FGYQQVRGYVGGVAGAYSDTTGVLYNVKALNASGSSLGSNQQVKTKELALTGGYTFGAFT
CCHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCHHHHH
PYLSYAKGYDLSAGGNTVSKSGYDQFVLGLDYALSKRTDVYTSYGHVNWKADGVASESSF
HHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCCCEEEEECCCEEEECCCCCCCCCC
GLGLIHRF
CEEEEECC
>Mature Secondary Structure
MNKKLIALALAALPAAAMADVTIYGQIRGGYEYNKTYNSTLSKDANGKPQGSSEINDWTS
CCCCEEEHHHHHCCHHHHEEEEEEEEEECCEEECCCCCCHHCCCCCCCCCCCCHHHHHHH
RLGFKGGESLGNGLKAIWQVESAISVDGTNSTGFGTRDTFIGLAGDSWGQVRLGRLSNYP
HHCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCC
NMDMEQVDPGYYSSQSVGGLGMFTRLDTRVNNSIRYDSPNWSGFSYMALWGVDEARNVAT
CCCHHHCCCCCCCCCCCCCEEHHEEHHHHHCCCEEECCCCCCCEEEEEEECCCHHHCCCC
DGSGSRTNNQLINIGLSYENSGYFAKYSFVNMGDSNKLGAGLKDWHRLEAGYNANNIYAA
CCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEE
FGYQQVRGYVGGVAGAYSDTTGVLYNVKALNASGSSLGSNQQVKTKELALTGGYTFGAFT
CCHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCHHHHH
PYLSYAKGYDLSAGGNTVSKSGYDQFVLGLDYALSKRTDVYTSYGHVNWKADGVASESSF
HHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCCCEEEEECCCEEEECCCCCCCCCC
GLGLIHRF
CEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1330818 [H]