| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499255
Identifier: 34499255
GI number: 34499255
Start: 4097334
End: 4097762
Strand: Reverse
Name: 34499255
Synonym: CV_3800
Alternate gene names: NA
Gene position: 4097762-4097334 (Counterclockwise)
Preceding gene: 34499256
Following gene: 34499253
Centisome position: 86.25
GC content: 64.57
Gene sequence:
>429_bases ATGGACGGCTTGCGTGCAGTGGCCAAGACCTTGTGGATTGGCGGTTTGTGGGTGATCGGTCTGATCGTGGCGCCGGTGCT GTTCAAGTCGCTGGACGCGGCGACCGCCGGCATGGTGGCGGGGAGGCTGTTCTCGGCCATCGCCTGGGTCGGGCTGGTGT GCGGGGTGTTCCTGCTGGTCGACCAGGTCTGGCGCAACGGCGTGGCCGGCTTGAAACAGGGCGCCTTCTGGCTGATTGTC GGCATGCTGGTCTGCACGCTGATCAACCAGTTCGGCGTCGCGCCCATCATCGTCACCTTGAAGCAGCAGATGAATCACGC GGCGGAAGGGCTGTTCGGCGGCGGCTTCGCCACCTGGCACGCCATCTCCAGCCTGATTTACCTGGTGCAGAGCGTGCTTG GCCTCGCCTATATCTGGCGCAGCGAGTGA
Upstream 100 bases:
>100_bases TGGCCCCTGGCGGCATCCGCGAGTACGAAGTGCTCGACGTCAAATACATCTGATGCGGACCGCGCGTTTTTCATGAGCTG CGTCTGTTGCAGGGGGAGAG
Downstream 100 bases:
>100_bases CGCGGCGATAAAAAAAGCGGTGGCAAAGCCACCGCTTTTTTTCATCCGCCGGGCGGGAGGACTCAGTCCTTCATCGCCTG CTTGTTCTTCGGCAGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MDGLRAVAKTLWIGGLWVIGLIVAPVLFKSLDAATAGMVAGRLFSAIAWVGLVCGVFLLVDQVWRNGVAGLKQGAFWLIV GMLVCTLINQFGVAPIIVTLKQQMNHAAEGLFGGGFATWHAISSLIYLVQSVLGLAYIWRSE
Sequences:
>Translated_142_residues MDGLRAVAKTLWIGGLWVIGLIVAPVLFKSLDAATAGMVAGRLFSAIAWVGLVCGVFLLVDQVWRNGVAGLKQGAFWLIV GMLVCTLINQFGVAPIIVTLKQQMNHAAEGLFGGGFATWHAISSLIYLVQSVLGLAYIWRSE >Mature_142_residues MDGLRAVAKTLWIGGLWVIGLIVAPVLFKSLDAATAGMVAGRLFSAIAWVGLVCGVFLLVDQVWRNGVAGLKQGAFWLIV GMLVCTLINQFGVAPIIVTLKQQMNHAAEGLFGGGFATWHAISSLIYLVQSVLGLAYIWRSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15186; Mature: 15186
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGLRAVAKTLWIGGLWVIGLIVAPVLFKSLDAATAGMVAGRLFSAIAWVGLVCGVFLLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQVWRNGVAGLKQGAFWLIVGMLVCTLINQFGVAPIIVTLKQQMNHAAEGLFGGGFATWH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHH AISSLIYLVQSVLGLAYIWRSE HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDGLRAVAKTLWIGGLWVIGLIVAPVLFKSLDAATAGMVAGRLFSAIAWVGLVCGVFLLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQVWRNGVAGLKQGAFWLIVGMLVCTLINQFGVAPIIVTLKQQMNHAAEGLFGGGFATWH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHH AISSLIYLVQSVLGLAYIWRSE HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA