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The map label for this gene is yhbY [C]

Identifier: 34499254

GI number: 34499254

Start: 4096789

End: 4097271

Strand: Direct

Name: yhbY [C]

Synonym: CV_3799

Alternate gene names: 34499254

Gene position: 4096789-4097271 (Clockwise)

Preceding gene: 34499248

Following gene: 34499274

Centisome position: 86.23

GC content: 59.63

Gene sequence:

>483_bases
TTGCCATACGCGGCGGTGCTTTCTGTCGTCTCACTCGTCAGGATAGCCGATGCGCGCCGGACGGCGCGCTATCCTGTTGT
TTTTCGGTTATTTCAGCCCCAAACTTTGGGCGCAGGGCCAAATTCTAGTAGAATCGCGTTTTGCTTTGAATTCCGTATTT
CCATGAAAATTGAACTCAAGCCGTTTCAGCGCAAGTACCTGCAGGGTCTGGCGCACGGCATCGACCCGGTGGTGATGGTG
GGCAACAACGGCCTGACCGAAGCCGTGGTGCGCGAAATCGCCATCAGCCTGGACGCCCACGAACTGATCAAAGTGCGCGT
GCTGGGCGACGACCGCGACGCCCGCATCGCCATGTTCGAGCAGATCTGCGACGAACTGGGCTGCGCCCCTGTGCAGCACA
TCGGCAAGCTTCTGGTGCTGTGGCGCCCCAGCGACAAGGCGCGCATCGCGCTGCCGAAGAACAAGCAGGCGATGAAGGAC
TGA

Upstream 100 bases:

>100_bases
AGTTTGTAGGCGGCGCGGGCGCGGTAACCGTCCTTCTGCGCCATGTGCACGTATTGATCGTTGACGTGCTCCTGCAACCA
GTTGTTGCTGCTCTTGCTTC

Downstream 100 bases:

>100_bases
GTCCTCCCGCCCGGCGGATGAAAAAAAGCGGTGGCTTTGCCACCGCTTTTTTTATCGCCGCGTCACTCGCTGCGCCAGAT
ATAGGCGAGGCCAAGCACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MPYAAVLSVVSLVRIADARRTARYPVVFRLFQPQTLGAGPNSSRIAFCFEFRISMKIELKPFQRKYLQGLAHGIDPVVMV
GNNGLTEAVVREIAISLDAHELIKVRVLGDDRDARIAMFEQICDELGCAPVQHIGKLLVLWRPSDKARIALPKNKQAMKD

Sequences:

>Translated_160_residues
MPYAAVLSVVSLVRIADARRTARYPVVFRLFQPQTLGAGPNSSRIAFCFEFRISMKIELKPFQRKYLQGLAHGIDPVVMV
GNNGLTEAVVREIAISLDAHELIKVRVLGDDRDARIAMFEQICDELGCAPVQHIGKLLVLWRPSDKARIALPKNKQAMKD
>Mature_159_residues
PYAAVLSVVSLVRIADARRTARYPVVFRLFQPQTLGAGPNSSRIAFCFEFRISMKIELKPFQRKYLQGLAHGIDPVVMVG
NNGLTEAVVREIAISLDAHELIKVRVLGDDRDARIAMFEQICDELGCAPVQHIGKLLVLWRPSDKARIALPKNKQAMKD

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=97, Percent_Identity=46.3917525773196, Blast_Score=97, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 17898; Mature: 17767

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYAAVLSVVSLVRIADARRTARYPVVFRLFQPQTLGAGPNSSRIAFCFEFRISMKIELK
CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEEEEC
PFQRKYLQGLAHGIDPVVMVGNNGLTEAVVREIAISLDAHELIKVRVLGDDRDARIAMFE
HHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCHHHEEEEEEECCCCCHHHHHHH
QICDELGCAPVQHIGKLLVLWRPSDKARIALPKNKQAMKD
HHHHHHCCCCHHHHCEEEEEECCCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
PYAAVLSVVSLVRIADARRTARYPVVFRLFQPQTLGAGPNSSRIAFCFEFRISMKIELK
CHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEEEEC
PFQRKYLQGLAHGIDPVVMVGNNGLTEAVVREIAISLDAHELIKVRVLGDDRDARIAMFE
HHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCHHHEEEEEEECCCCCHHHHHHH
QICDELGCAPVQHIGKLLVLWRPSDKARIALPKNKQAMKD
HHHHHHCCCCHHHHCEEEEEECCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]