| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is gmk
Identifier: 34499225
GI number: 34499225
Start: 4068276
End: 4068908
Strand: Reverse
Name: gmk
Synonym: CV_3770
Alternate gene names: 34499225
Gene position: 4068908-4068276 (Counterclockwise)
Preceding gene: 34499228
Following gene: 34499224
Centisome position: 85.64
GC content: 67.14
Gene sequence:
>633_bases ATGAACCAGCCCATCGGCAACATTTACATCGTGGTGGCGCCCTCCGGCGCCGGCAAGACCTCGCTGGTGGCAGCGCTGTT GCAGGCCGAGCCGAGCGTCGAGCTGTCGATTTCCTATAGCACACGCCAGGCGCGCAAGGGCGAGATCGACGGCCAGCATT ACCACTTCATCGACCGCGCGGCTTTCGAAGAGATGAAGGACCGCGGCGACTTCCTGGAGTGGGCCGAGGTGTACGGCAAC TGCTACGGCACCAGCGCGCCGTGGATACGCGGCCGCCTGGAGGCCGGCAGGGACATCCTGCTGGAAATCGACTGGCAGGG CGCCGAGCAGGTGCGCAAGGTTTTTCCGGACGCCATCGGCATCTTCATCGCCCCGCCGTCCATCGAGGAGCTGGAGCGCC GCCTGCGCGGCCGCGACACCGACACCGAGGAAGTGATCCTGCGCCGGCTGGCCTCGGCCCGCGCCGAGATCGACAAGATC GCCGAGTACGACTACATCGTGGTCAACGACGACTTCGAGCGCGCGCGGCTGGATCTGATCAGCATCGTGCGCGCTCAGCG CCTGAGAAGCGCCCCGCAGTGCCGCCGGCTGGCCGACATGTTCCGCCGCATGGGCACCGCCGGCGCGAAATGA
Upstream 100 bases:
>100_bases AACACCTAAATCTTGACGTGAAAATATGTCATTGCTTAACAATGGCGGTCCCGCTGTGCTATCCTGAAAAATTACTCTTT GGCAAATGTTGGTAGCTTGC
Downstream 100 bases:
>100_bases AAATAGTTCCGTCCCGCCGTGCCGGACGGGACGAAAATCGATATAGTGAACCCTGTAACCGTCATTAGCTGAGAGAGATC ATGGCCCGTATTACCGTTGA
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MNQPIGNIYIVVAPSGAGKTSLVAALLQAEPSVELSISYSTRQARKGEIDGQHYHFIDRAAFEEMKDRGDFLEWAEVYGN CYGTSAPWIRGRLEAGRDILLEIDWQGAEQVRKVFPDAIGIFIAPPSIEELERRLRGRDTDTEEVILRRLASARAEIDKI AEYDYIVVNDDFERARLDLISIVRAQRLRSAPQCRRLADMFRRMGTAGAK
Sequences:
>Translated_210_residues MNQPIGNIYIVVAPSGAGKTSLVAALLQAEPSVELSISYSTRQARKGEIDGQHYHFIDRAAFEEMKDRGDFLEWAEVYGN CYGTSAPWIRGRLEAGRDILLEIDWQGAEQVRKVFPDAIGIFIAPPSIEELERRLRGRDTDTEEVILRRLASARAEIDKI AEYDYIVVNDDFERARLDLISIVRAQRLRSAPQCRRLADMFRRMGTAGAK >Mature_210_residues MNQPIGNIYIVVAPSGAGKTSLVAALLQAEPSVELSISYSTRQARKGEIDGQHYHFIDRAAFEEMKDRGDFLEWAEVYGN CYGTSAPWIRGRLEAGRDILLEIDWQGAEQVRKVFPDAIGIFIAPPSIEELERRLRGRDTDTEEVILRRLASARAEIDKI AEYDYIVVNDDFERARLDLISIVRAQRLRSAPQCRRLADMFRRMGTAGAK
Specific function: Essential for recycling GMP and indirectly, cGMP
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain
Homologues:
Organism=Homo sapiens, GI226874833, Length=174, Percent_Identity=36.7816091954023, Blast_Score=124, Evalue=8e-29, Organism=Homo sapiens, GI4504221, Length=174, Percent_Identity=36.7816091954023, Blast_Score=124, Evalue=8e-29, Organism=Homo sapiens, GI226874831, Length=174, Percent_Identity=36.7816091954023, Blast_Score=124, Evalue=9e-29, Organism=Homo sapiens, GI38570142, Length=189, Percent_Identity=30.6878306878307, Blast_Score=81, Evalue=6e-16, Organism=Homo sapiens, GI14780902, Length=200, Percent_Identity=25, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI21361598, Length=194, Percent_Identity=26.8041237113402, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI52630447, Length=193, Percent_Identity=27.979274611399, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI111154074, Length=154, Percent_Identity=31.1688311688312, Blast_Score=64, Evalue=8e-11, Organism=Escherichia coli, GI1790080, Length=193, Percent_Identity=54.4041450777202, Blast_Score=214, Evalue=3e-57, Organism=Caenorhabditis elegans, GI193203132, Length=180, Percent_Identity=37.2222222222222, Blast_Score=129, Evalue=9e-31, Organism=Caenorhabditis elegans, GI17508835, Length=180, Percent_Identity=37.2222222222222, Blast_Score=129, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17557440, Length=180, Percent_Identity=26.6666666666667, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6320662, Length=192, Percent_Identity=36.9791666666667, Blast_Score=139, Evalue=3e-34, Organism=Drosophila melanogaster, GI21356141, Length=179, Percent_Identity=39.1061452513966, Blast_Score=123, Evalue=8e-29, Organism=Drosophila melanogaster, GI161077626, Length=186, Percent_Identity=28.494623655914, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI24640542, Length=186, Percent_Identity=28.494623655914, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI116007136, Length=186, Percent_Identity=28.494623655914, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI85724806, Length=186, Percent_Identity=28.494623655914, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI45554481, Length=186, Percent_Identity=28.494623655914, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI45554489, Length=186, Percent_Identity=28.494623655914, Blast_Score=74, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KGUA_CHRVO (Q7NRL1)
Other databases:
- EMBL: AE016825 - RefSeq: NP_903440.1 - ProteinModelPortal: Q7NRL1 - GeneID: 2548445 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_3770 - NMPDR: fig|243365.1.peg.3770 - HOGENOM: HBG671982 - OMA: DIDWQGT - PhylomeDB: Q7NRL1 - BioCyc: CVIO243365:CV_3770-MONOMER - BRENDA: 2.7.4.8 - GO: GO:0005737 - HAMAP: MF_00328 - InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 - SMART: SM00072 - TIGRFAMs: TIGR03263
Pfam domain/function: PF00625 Guanylate_kin
EC number: =2.7.4.8
Molecular weight: Translated: 23758; Mature: 23758
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS00856 GUANYLATE_KINASE_1; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQPIGNIYIVVAPSGAGKTSLVAALLQAEPSVELSISYSTRQARKGEIDGQHYHFIDRA CCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCCCHHHHHHHH AFEEMKDRGDFLEWAEVYGNCYGTSAPWIRGRLEAGRDILLEIDWQGAEQVRKVFPDAIG HHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHCHHHHE IFIAPPSIEELERRLRGRDTDTEEVILRRLASARAEIDKIAEYDYIVVNDDFERARLDLI EEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHH SIVRAQRLRSAPQCRRLADMFRRMGTAGAK HHHHHHHHHCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNQPIGNIYIVVAPSGAGKTSLVAALLQAEPSVELSISYSTRQARKGEIDGQHYHFIDRA CCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCCCHHHHHHHH AFEEMKDRGDFLEWAEVYGNCYGTSAPWIRGRLEAGRDILLEIDWQGAEQVRKVFPDAIG HHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHCHHHHE IFIAPPSIEELERRLRGRDTDTEEVILRRLASARAEIDKIAEYDYIVVNDDFERARLDLI EEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHH SIVRAQRLRSAPQCRRLADMFRRMGTAGAK HHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782