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The map label for this gene is fliD [H]

Identifier: 34499184

GI number: 34499184

Start: 4025894

End: 4027435

Strand: Direct

Name: fliD [H]

Synonym: CV_3729

Alternate gene names: 34499184

Gene position: 4025894-4027435 (Clockwise)

Preceding gene: 34499183

Following gene: 34499185

Centisome position: 84.74

GC content: 64.98

Gene sequence:

>1542_bases
GTGTTGGCAATGAACGCCCTGTCCGGATACAACCCCTCTGTCTCGTCTTTCGACAGCCTGCTGCCAAACTTGAGCAGTTT
GTTGTCGAGCGGCTTGCTGTTGGGCTCGTCCAGCGCCGCCAGCCAGGCCAGCGCCAGCAGCAGCAAAACGGATCCGATAC
AGATCGAGCTGTCCACGCTGGGCCAGCTGATGTCGATACTCGGCACCTTCCAGAGCAGTCTGCAGCAGATTTACGCGCCG
TCCATCCGTTTCGGCGGCGGCACCGCCAGCAGCAGCAATCCCGCCGTGGCCAGCGTCAGCACCTCCTCCGGCGCGCAGAA
CGCCAGTTATCTGCTCAATGTTTCCCAACTGGCGCAAGCTCAAAGCGCAACCACCAGCTTCTCCTTGTCCGACAGCGGCT
CCACCGTGGTGGGCAGCGGCAGCCTGACCATCTCCACCGGCAGCTATGCCTACACCAGCTCGACCTCGGCCACCAGCTTC
ACCGCCAGCGGCTCCCCGGTGACCATCAGCATCAGCAACGGCACGCTGTCCAGCATCGCCAGCTCGATCAACGGCGCCGG
CGCCGGCGTGGTAGCCAACGTGGTGCAGAACGCGTCGGGCGGCTACCAGCTGCAGATCAGCCAGGCCAGCACCGGCGCCA
GCAACAACTTCAAGATCACCGTCAGCGACAACGACGGCAACAACACCGACCAGAGCGGCCTGTCTCGGCTGGCCTTCGAC
CAGACCCAGGCGGTGGGCAGCGGCCAGAACCTGACCCAGACCCAGGCCGCGCTGAACGCCAGCTACACCGTCAACGGCGC
GTCCGGCTCCAGCGCCAGCAACGCCGGCATCCAGCTGGGCAGCGGCGTGTCAGCCAACCTGCTGGCCACCGGCAGCAGCA
ACATCACCGTCAACGTCGACTTCGGCCAGCTCAACACCAGCGCCCAGTCGCTGGCCAGCGCCTTCAACACCGCTCTGGGC
GCCATCAACAGCCTGCTGGGCAACCAGGTTCTGCCAAGCCAGGATCCTATCGCCAGGCAACTGCCGCAAATGCTGAACCA
GCAGGCGCAGAAGAGCTACAGCAACGGCAGCTCGCTGCTCACCACGCTGAGCCAGGTCGGCCTGAACTACCAAAGCCCGG
CGCAATACGGCTTGGGCGGCACGCTGAACCTGAACGTCGCTTCGCTGCAGGCCGCGTACAACAGCGATTCCAGCGGCACG
GCCAACCTACTGTACACGGTCGCGCAATCGCTGAACGCGCTGGCCAACAGCTATACCACTCAAGGCAACGGCACGCTGGT
CAACGAAACCCGCGCGCTGCAGGCCCAGCAGCGCACCCGGCAGCTGGTGACCAACACCCGGCCGACGCCCAATACCTTCC
CGTACAATCTGCAGAACCTGCTCAGCTACCCGTCCAGCAACAGCCTGCTGTCCTCCCAGCAGATCAGCGGCCTCGCGATG
TACGCGCTGGTGTACTCGATCGGCGCGCCGTACGCGCTGAACTCGCTGCTGGTCGGCCAGGGGCTGGGCCTGTCCAGCAG
CGGCTTCTCCGCCATCGCCTGA

Upstream 100 bases:

>100_bases
ACGGCATGGCATCGCCATGCCGTTTTACTTTTCCTAAAAATCCATTCCGGACAACAACTTGCGCGCCATGCGCTACACTC
AAACAAGGTGTGGCTTGCGA

Downstream 100 bases:

>100_bases
GCGATTTTCCCCGCCCTTTGCTCCATGCCGCGTTTGGCGGTAAAATTCATCGGATGATTGGATGTTTAATCGGACTCCCA
TGAATATTTCCTCCTCCAAG

Product: flagellar protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MLAMNALSGYNPSVSSFDSLLPNLSSLLSSGLLLGSSSAASQASASSSKTDPIQIELSTLGQLMSILGTFQSSLQQIYAP
SIRFGGGTASSSNPAVASVSTSSGAQNASYLLNVSQLAQAQSATTSFSLSDSGSTVVGSGSLTISTGSYAYTSSTSATSF
TASGSPVTISISNGTLSSIASSINGAGAGVVANVVQNASGGYQLQISQASTGASNNFKITVSDNDGNNTDQSGLSRLAFD
QTQAVGSGQNLTQTQAALNASYTVNGASGSSASNAGIQLGSGVSANLLATGSSNITVNVDFGQLNTSAQSLASAFNTALG
AINSLLGNQVLPSQDPIARQLPQMLNQQAQKSYSNGSSLLTTLSQVGLNYQSPAQYGLGGTLNLNVASLQAAYNSDSSGT
ANLLYTVAQSLNALANSYTTQGNGTLVNETRALQAQQRTRQLVTNTRPTPNTFPYNLQNLLSYPSSNSLLSSQQISGLAM
YALVYSIGAPYALNSLLVGQGLGLSSSGFSAIA

Sequences:

>Translated_513_residues
MLAMNALSGYNPSVSSFDSLLPNLSSLLSSGLLLGSSSAASQASASSSKTDPIQIELSTLGQLMSILGTFQSSLQQIYAP
SIRFGGGTASSSNPAVASVSTSSGAQNASYLLNVSQLAQAQSATTSFSLSDSGSTVVGSGSLTISTGSYAYTSSTSATSF
TASGSPVTISISNGTLSSIASSINGAGAGVVANVVQNASGGYQLQISQASTGASNNFKITVSDNDGNNTDQSGLSRLAFD
QTQAVGSGQNLTQTQAALNASYTVNGASGSSASNAGIQLGSGVSANLLATGSSNITVNVDFGQLNTSAQSLASAFNTALG
AINSLLGNQVLPSQDPIARQLPQMLNQQAQKSYSNGSSLLTTLSQVGLNYQSPAQYGLGGTLNLNVASLQAAYNSDSSGT
ANLLYTVAQSLNALANSYTTQGNGTLVNETRALQAQQRTRQLVTNTRPTPNTFPYNLQNLLSYPSSNSLLSSQQISGLAM
YALVYSIGAPYALNSLLVGQGLGLSSSGFSAIA
>Mature_513_residues
MLAMNALSGYNPSVSSFDSLLPNLSSLLSSGLLLGSSSAASQASASSSKTDPIQIELSTLGQLMSILGTFQSSLQQIYAP
SIRFGGGTASSSNPAVASVSTSSGAQNASYLLNVSQLAQAQSATTSFSLSDSGSTVVGSGSLTISTGSYAYTSSTSATSF
TASGSPVTISISNGTLSSIASSINGAGAGVVANVVQNASGGYQLQISQASTGASNNFKITVSDNDGNNTDQSGLSRLAFD
QTQAVGSGQNLTQTQAALNASYTVNGASGSSASNAGIQLGSGVSANLLATGSSNITVNVDFGQLNTSAQSLASAFNTALG
AINSLLGNQVLPSQDPIARQLPQMLNQQAQKSYSNGSSLLTTLSQVGLNYQSPAQYGLGGTLNLNVASLQAAYNSDSSGT
ANLLYTVAQSLNALANSYTTQGNGTLVNETRALQAQQRTRQLVTNTRPTPNTFPYNLQNLLSYPSSNSLLSSQQISGLAM
YALVYSIGAPYALNSLLVGQGLGLSSSGFSAIA

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=321, Percent_Identity=28.3489096573209, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 51703; Mature: 51703

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAMNALSGYNPSVSSFDSLLPNLSSLLSSGLLLGSSSAASQASASSSKTDPIQIELSTL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCHHHCCCCCCCCCCEEEEHHHH
GQLMSILGTFQSSLQQIYAPSIRFGGGTASSSNPAVASVSTSSGAQNASYLLNVSQLAQA
HHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCCCHHHEEEHHHHHHH
QSATTSFSLSDSGSTVVGSGSLTISTGSYAYTSSTSATSFTASGSPVTISISNGTLSSIA
HHCCCEEEECCCCCEEEECCEEEEECCCEEEECCCCCCEEECCCCCEEEEECCCCHHHHH
SSINGAGAGVVANVVQNASGGYQLQISQASTGASNNFKITVSDNDGNNTDQSGLSRLAFD
HHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH
QTQAVGSGQNLTQTQAALNASYTVNGASGSSASNAGIQLGSGVSANLLATGSSNITVNVD
HHHHCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCEEECCCCCCEEEEECCCEEEEEEE
FGQLNTSAQSLASAFNTALGAINSLLGNQVLPSQDPIARQLPQMLNQQAQKSYSNGSSLL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
TTLSQVGLNYQSPAQYGLGGTLNLNVASLQAAYNSDSSGTANLLYTVAQSLNALANSYTT
HHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEE
QGNGTLVNETRALQAQQRTRQLVTNTRPTPNTFPYNLQNLLSYPSSNSLLSSQQISGLAM
CCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH
YALVYSIGAPYALNSLLVGQGLGLSSSGFSAIA
HHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLAMNALSGYNPSVSSFDSLLPNLSSLLSSGLLLGSSSAASQASASSSKTDPIQIELSTL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCHHHCCCCCCCCCCEEEEHHHH
GQLMSILGTFQSSLQQIYAPSIRFGGGTASSSNPAVASVSTSSGAQNASYLLNVSQLAQA
HHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCCCHHHEEEHHHHHHH
QSATTSFSLSDSGSTVVGSGSLTISTGSYAYTSSTSATSFTASGSPVTISISNGTLSSIA
HHCCCEEEECCCCCEEEECCEEEEECCCEEEECCCCCCEEECCCCCEEEEECCCCHHHHH
SSINGAGAGVVANVVQNASGGYQLQISQASTGASNNFKITVSDNDGNNTDQSGLSRLAFD
HHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH
QTQAVGSGQNLTQTQAALNASYTVNGASGSSASNAGIQLGSGVSANLLATGSSNITVNVD
HHHHCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCEEECCCCCCEEEEECCCEEEEEEE
FGQLNTSAQSLASAFNTALGAINSLLGNQVLPSQDPIARQLPQMLNQQAQKSYSNGSSLL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
TTLSQVGLNYQSPAQYGLGGTLNLNVASLQAAYNSDSSGTANLLYTVAQSLNALANSYTT
HHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEE
QGNGTLVNETRALQAQQRTRQLVTNTRPTPNTFPYNLQNLLSYPSSNSLLSSQQISGLAM
CCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH
YALVYSIGAPYALNSLLVGQGLGLSSSGFSAIA
HHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10678962; 10984043 [H]