| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is glnH [C]
Identifier: 34499106
GI number: 34499106
Start: 3950570
End: 3951298
Strand: Direct
Name: glnH [C]
Synonym: CV_3651
Alternate gene names: 34499106
Gene position: 3950570-3951298 (Clockwise)
Preceding gene: 34499104
Following gene: 34499116
Centisome position: 83.15
GC content: 68.04
Gene sequence:
>729_bases ATGAAATCCCTGTTCTGGTGCGCGCTGCTCTGCGCAGCCGCCCTTGTGCCGGCCGCCGACAAACCAGCCTGGCGGCTGGT GGCGGACGCCAATTTCGAACCCTACAGCTATCTGTCCGAGGACCTTGCCCCGCGGGGGCTGGACGTGGAACTGGTCAGCG CGGTGATGCGCGAGACCGGGCAGCCGTTCCGCATCAGCCTGCTGCCCTGGGAACGGGTGAAGCAGCAACTGGCGCTGAAG GAGGCCGACGCCGGCTTCGTGTTCACCGGCACCGCGGAGCGCCGCGCGCAATACGATCTGGTCGGCCCGCTGCGCAAGGG CCAGACGGTGTTCGTCGTCATGAAGCGCAACCCGCTCACGGATTGGCGCGGCCTGGCCGATCTCAAGCCCTATGTGATCG GCCAGGTGCGCGGCTACAGCTACGACACCGAATTCGACAAGGCCCCGCTCACCCGCGACGACCACGCCGGCTCGCCGCGC CAGCTGGTGGCGATGCTGCTGGCCGGCCGGGTGGATGTCATCATCGGCGACAAGGTGCAGCTGATGTACTTCATCCAGGA GCAAAGGGCCGCCGGCCTGGTGAAGGTGCTGCCCAGGCCGTTGGTGGAGATGCCGCGCTACGTGGCCTTCGCCAAGGGCG ATCCGCGCGCGCGGCAGTTCGAGGCGGCGCTGAAACGGCTGCAGCAGAGCGGCGCGCTGCAGCCCATATTCCAGCGCTGG GCGCAGTGA
Upstream 100 bases:
>100_bases CCGGCGGCATGCTTGACCGCCGCATCCAAATGCTAAGCTGAAGCATTCGATGCGGATCCGGCCAGCGGGATGGCCTACCG ACACAGGAGTCGAGACGCGG
Downstream 100 bases:
>100_bases GCGCTAGCCGCGCGCCGGCAACAGGTCCAGCCTGTCGGTGCACAGGCTGTCCACGCCCCAGCCCAGCAAGCGGCGGGCGT CGGCCGGATCGTTGACCGTG
Product: glutamine transport system substrate-binding protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKSLFWCALLCAAALVPAADKPAWRLVADANFEPYSYLSEDLAPRGLDVELVSAVMRETGQPFRISLLPWERVKQQLALK EADAGFVFTGTAERRAQYDLVGPLRKGQTVFVVMKRNPLTDWRGLADLKPYVIGQVRGYSYDTEFDKAPLTRDDHAGSPR QLVAMLLAGRVDVIIGDKVQLMYFIQEQRAAGLVKVLPRPLVEMPRYVAFAKGDPRARQFEAALKRLQQSGALQPIFQRW AQ
Sequences:
>Translated_242_residues MKSLFWCALLCAAALVPAADKPAWRLVADANFEPYSYLSEDLAPRGLDVELVSAVMRETGQPFRISLLPWERVKQQLALK EADAGFVFTGTAERRAQYDLVGPLRKGQTVFVVMKRNPLTDWRGLADLKPYVIGQVRGYSYDTEFDKAPLTRDDHAGSPR QLVAMLLAGRVDVIIGDKVQLMYFIQEQRAAGLVKVLPRPLVEMPRYVAFAKGDPRARQFEAALKRLQQSGALQPIFQRW AQ >Mature_242_residues MKSLFWCALLCAAALVPAADKPAWRLVADANFEPYSYLSEDLAPRGLDVELVSAVMRETGQPFRISLLPWERVKQQLALK EADAGFVFTGTAERRAQYDLVGPLRKGQTVFVVMKRNPLTDWRGLADLKPYVIGQVRGYSYDTEFDKAPLTRDDHAGSPR QLVAMLLAGRVDVIIGDKVQLMYFIQEQRAAGLVKVLPRPLVEMPRYVAFAKGDPRARQFEAALKRLQQSGALQPIFQRW AQ
Specific function: Involved In A Glutamine-Transport System Glnhpq. [C]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27236; Mature: 27236
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLFWCALLCAAALVPAADKPAWRLVADANFEPYSYLSEDLAPRGLDVELVSAVMRETG CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCC QPFRISLLPWERVKQQLALKEADAGFVFTGTAERRAQYDLVGPLRKGQTVFVVMKRNPLT CCEEEEECCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCCCEEEEEEECCCCC DWRGLADLKPYVIGQVRGYSYDTEFDKAPLTRDDHAGSPRQLVAMLLAGRVDVIIGDKVQ HHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCEE LMYFIQEQRAAGLVKVLPRPLVEMPRYVAFAKGDPRARQFEAALKRLQQSGALQPIFQRW EHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHH AQ CC >Mature Secondary Structure MKSLFWCALLCAAALVPAADKPAWRLVADANFEPYSYLSEDLAPRGLDVELVSAVMRETG CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCC QPFRISLLPWERVKQQLALKEADAGFVFTGTAERRAQYDLVGPLRKGQTVFVVMKRNPLT CCEEEEECCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCCCEEEEEEECCCCC DWRGLADLKPYVIGQVRGYSYDTEFDKAPLTRDDHAGSPRQLVAMLLAGRVDVIIGDKVQ HHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCEE LMYFIQEQRAAGLVKVLPRPLVEMPRYVAFAKGDPRARQFEAALKRLQQSGALQPIFQRW EHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHH AQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA