| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499015
Identifier: 34499015
GI number: 34499015
Start: 3867074
End: 3867547
Strand: Reverse
Name: 34499015
Synonym: CV_3560
Alternate gene names: NA
Gene position: 3867547-3867074 (Counterclockwise)
Preceding gene: 34499016
Following gene: 34499014
Centisome position: 81.4
GC content: 69.62
Gene sequence:
>474_bases ATGGCCGCCATGAAAAGACAGCTCATCGCTTTCTCCCTGCTGGGCTCGCTGACAGCGTGCAGCGCGCTGCAGCAGTTGGG CGTGCCCATCCATTCCGGCTCGGGCGCCTCGTCGCGTCCGGCGCCGCCGCGCGCCGCCGCCAAGGTGGACCTGCTGCTGG CCGAGGCCAACCGCCTGGCCGACAAGGTCAAGTCGGGCGAACTGACCCGCACCGCGGCGGCCGACCAACTGAACGCCGCC CGGCTGCGCATCGCCGGCAGCAACGCGGTGGACAACGACAACTTCGCCGTCTATCGCCAGCTGACGGCGGAGCGCGACGC CGGCCGCATCGACTCCGACGCCTTCCGCGCCAGGCTGGAAGCCCATCTTCGCGAATGGATGCGGCGCTGGCCCAAGTACG CGCCCAAGCCGGCCGATCCCGCGTTCACCAATTTCCTGCTCAAGCTGTACGGCTTGCCGCCGCTGGGGTACTGA
Upstream 100 bases:
>100_bases CTTGGCTGAGCGGTCGCCGGATTCGGCCCGCCGGCCCGCGCCGCGCGCAATCGATCGCAATACCTTTGCCGTTGACGGCG CGCGGGCAGGGCGGGCTACA
Downstream 100 bases:
>100_bases TGAAGTCTAAGAAACAAGCCAGGGCCGCCTGCCCCTGCGGCGGCGGCGAGCTGGCCGCCTGCTGCGGCCGCTACCTCGGT CCGGACGCTTCGCCGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MAAMKRQLIAFSLLGSLTACSALQQLGVPIHSGSGASSRPAPPRAAAKVDLLLAEANRLADKVKSGELTRTAAADQLNAA RLRIAGSNAVDNDNFAVYRQLTAERDAGRIDSDAFRARLEAHLREWMRRWPKYAPKPADPAFTNFLLKLYGLPPLGY
Sequences:
>Translated_157_residues MAAMKRQLIAFSLLGSLTACSALQQLGVPIHSGSGASSRPAPPRAAAKVDLLLAEANRLADKVKSGELTRTAAADQLNAA RLRIAGSNAVDNDNFAVYRQLTAERDAGRIDSDAFRARLEAHLREWMRRWPKYAPKPADPAFTNFLLKLYGLPPLGY >Mature_156_residues AAMKRQLIAFSLLGSLTACSALQQLGVPIHSGSGASSRPAPPRAAAKVDLLLAEANRLADKVKSGELTRTAAADQLNAAR LRIAGSNAVDNDNFAVYRQLTAERDAGRIDSDAFRARLEAHLREWMRRWPKYAPKPADPAFTNFLLKLYGLPPLGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17044; Mature: 16913
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAMKRQLIAFSLLGSLTACSALQQLGVPIHSGSGASSRPAPPRAAAKVDLLLAEANRLA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH DKVKSGELTRTAAADQLNAARLRIAGSNAVDNDNFAVYRQLTAERDAGRIDSDAFRARLE HHHHCCCCHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH AHLREWMRRWPKYAPKPADPAFTNFLLKLYGLPPLGY HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AAMKRQLIAFSLLGSLTACSALQQLGVPIHSGSGASSRPAPPRAAAKVDLLLAEANRLA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH DKVKSGELTRTAAADQLNAARLRIAGSNAVDNDNFAVYRQLTAERDAGRIDSDAFRARLE HHHHCCCCHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH AHLREWMRRWPKYAPKPADPAFTNFLLKLYGLPPLGY HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA