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The map label for this gene is ychJ [C]

Identifier: 34499014

GI number: 34499014

Start: 3866667

End: 3867074

Strand: Reverse

Name: ychJ [C]

Synonym: CV_3559

Alternate gene names: 34499014

Gene position: 3867074-3866667 (Counterclockwise)

Preceding gene: 34499015

Following gene: 34499013

Centisome position: 81.39

GC content: 69.36

Gene sequence:

>408_bases
ATGAAGTCTAAGAAACAAGCCAGGGCCGCCTGCCCCTGCGGCGGCGGCGAGCTGGCCGCCTGCTGCGGCCGCTACCTCGG
TCCGGACGCTTCGCCGGCGCCGACCGCGCAGGCGTTGATGCGCTCGCGCTACAGCGCCTACGCGCTGGGGCTGGAGGATT
ACCTGCTGGCCACCTGGCATCCGTCCACCCGGCCCGAGGCGCTGCATCTGGACGAAGATGCCGGCGTGGTGAAGTGGATA
GGCCTGGAGGTGAAGCGCTGCGAGGCCGGCAGCGAGCGCGATGCCGAAGGCGTGGTGGAATTCGTCGCCCGCTGCAAGGT
GGGCGGCAAGGCCGAGCGCATGCATGAAACCAGCCGTTTCCTGCGCGAAGACGGCCGCTGGTACTACGTGTCCGGCCTGG
TGGCCTGA

Upstream 100 bases:

>100_bases
AATGGATGCGGCGCTGGCCCAAGTACGCGCCCAAGCCGGCCGATCCCGCGTTCACCAATTTCCTGCTCAAGCTGTACGGC
TTGCCGCCGCTGGGGTACTG

Downstream 100 bases:

>100_bases
GCGGCGCTTGTCCTGGCGCAAGTTCGCGCCCATCAATGTTTGACCCGGCAGGCCCATGGCGGGAGCATGGAGTTTTCCCA
CGCCGGAAAACATCATGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKSKKQARAACPCGGGELAACCGRYLGPDASPAPTAQALMRSRYSAYALGLEDYLLATWHPSTRPEALHLDEDAGVVKWI
GLEVKRCEAGSERDAEGVVEFVARCKVGGKAERMHETSRFLREDGRWYYVSGLVA

Sequences:

>Translated_135_residues
MKSKKQARAACPCGGGELAACCGRYLGPDASPAPTAQALMRSRYSAYALGLEDYLLATWHPSTRPEALHLDEDAGVVKWI
GLEVKRCEAGSERDAEGVVEFVARCKVGGKAERMHETSRFLREDGRWYYVSGLVA
>Mature_135_residues
MKSKKQARAACPCGGGELAACCGRYLGPDASPAPTAQALMRSRYSAYALGLEDYLLATWHPSTRPEALHLDEDAGVVKWI
GLEVKRCEAGSERDAEGVVEFVARCKVGGKAERMHETSRFLREDGRWYYVSGLVA

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family

Homologues:

Organism=Escherichia coli, GI1787484, Length=125, Percent_Identity=43.2, Blast_Score=93, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3559_CHRVO (Q7NS67)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_903229.1
- ProteinModelPortal:   Q7NS67
- SMR:   Q7NS67
- GeneID:   2546881
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_3559
- NMPDR:   fig|243365.1.peg.3559
- HOGENOM:   HBG609508
- OMA:   FTARWHD
- PhylomeDB:   Q7NS67
- ProtClustDB:   CLSK385336
- BioCyc:   CVIO243365:CV_3559-MONOMER
- HAMAP:   MF_00612
- InterPro:   IPR023006

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14738; Mature: 14738

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKKQARAACPCGGGELAACCGRYLGPDASPAPTAQALMRSRYSAYALGLEDYLLATWH
CCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHEEEEEC
PSTRPEALHLDEDAGVVKWIGLEVKRCEAGSERDAEGVVEFVARCKVGGKAERMHETSRF
CCCCCCEEEECCCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
LREDGRWYYVSGLVA
HHHCCCEEEEEEECC
>Mature Secondary Structure
MKSKKQARAACPCGGGELAACCGRYLGPDASPAPTAQALMRSRYSAYALGLEDYLLATWH
CCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHEEEEEC
PSTRPEALHLDEDAGVVKWIGLEVKRCEAGSERDAEGVVEFVARCKVGGKAERMHETSRF
CCCCCCEEEECCCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
LREDGRWYYVSGLVA
HHHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782