| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is bsaA [H]
Identifier: 34499010
GI number: 34499010
Start: 3864233
End: 3864709
Strand: Direct
Name: bsaA [H]
Synonym: CV_3555
Alternate gene names: 34499010
Gene position: 3864233-3864709 (Clockwise)
Preceding gene: 34499009
Following gene: 34499017
Centisome position: 81.33
GC content: 66.88
Gene sequence:
>477_bases ATGAGCATCTACGACTTCTCCTTCCGCCGCCTGGACGGCAGCGAACAGGCGATGGCCGACTACCGCGGCAGCGTGCTGCT GCTGGTCAACACCGCCAGCCGCTGCGGCTTCACGTCGCAATACGCCGGCCTGGAGGCGCTGCACCGCCGCTTCGGCCCGC AAGGCCTGGCGATCATCGGCTTCCCCTGCAACCAGTTCGGCGCCCAGGAGCCGGGCGACGCCGGCGAAATCGGCGCCTTC TGCCAGAAGAACTACGGCGTGGACTTCGCCATGGCCGACAAGGTGGACGTCAACGGCGCGAACGCCCACCCGCTGTGGCA GTATCTGAAGCGGCAGAAACGCGGCCTGCTCGGGCAGGCGATACGCTGGAACTTCAGCAAATTCCTGGTGGACCGCCAGG GCCGGGTGGTCGCGCGCTTCGCCCCGTTCACCCGGCCGGAAAAACTGGCCGCCAGGATAGAAGCGCTGCTCAAATGA
Upstream 100 bases:
>100_bases CGCGGTTCCCCCTTGCCGCTGCGCCCCCTTTTTATGCCCATACGCTTGCCAGCGCCCGCCAACGAAGCCATCATTTTCTT TTCCCAGCTTCCCGCCATTC
Downstream 100 bases:
>100_bases AAAGAGCCGGGCATCGCCCGGCTCCATCGCCGCGTCGTCGCGGCGCAGCGGAATGATCCCGCTCACGCGCACGAATCGAT ATTGCGCCTGGCGCTCACAG
Product: glutathione peroxidase protein
Products: glutathione disulfide; H2O
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSIYDFSFRRLDGSEQAMADYRGSVLLLVNTASRCGFTSQYAGLEALHRRFGPQGLAIIGFPCNQFGAQEPGDAGEIGAF CQKNYGVDFAMADKVDVNGANAHPLWQYLKRQKRGLLGQAIRWNFSKFLVDRQGRVVARFAPFTRPEKLAARIEALLK
Sequences:
>Translated_158_residues MSIYDFSFRRLDGSEQAMADYRGSVLLLVNTASRCGFTSQYAGLEALHRRFGPQGLAIIGFPCNQFGAQEPGDAGEIGAF CQKNYGVDFAMADKVDVNGANAHPLWQYLKRQKRGLLGQAIRWNFSKFLVDRQGRVVARFAPFTRPEKLAARIEALLK >Mature_157_residues SIYDFSFRRLDGSEQAMADYRGSVLLLVNTASRCGFTSQYAGLEALHRRFGPQGLAIIGFPCNQFGAQEPGDAGEIGAFC QKNYGVDFAMADKVDVNGANAHPLWQYLKRQKRGLLGQAIRWNFSKFLVDRQGRVVARFAPFTRPEKLAARIEALLK
Specific function: Not Essential For B12 Transport; However, It Is An Auxiliary Component Of The Transport System. [C]
COG id: COG0386
COG function: function code O; Glutathione peroxidase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutathione peroxidase family [H]
Homologues:
Organism=Homo sapiens, GI75709200, Length=148, Percent_Identity=46.6216216216216, Blast_Score=137, Evalue=3e-33, Organism=Homo sapiens, GI90903240, Length=148, Percent_Identity=46.6216216216216, Blast_Score=136, Evalue=6e-33, Organism=Homo sapiens, GI15618997, Length=156, Percent_Identity=41.6666666666667, Blast_Score=127, Evalue=3e-30, Organism=Homo sapiens, GI192455698, Length=158, Percent_Identity=36.7088607594937, Blast_Score=117, Evalue=5e-27, Organism=Homo sapiens, GI90903238, Length=130, Percent_Identity=46.9230769230769, Blast_Score=117, Evalue=6e-27, Organism=Homo sapiens, GI4557629, Length=183, Percent_Identity=35.5191256830601, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI6006001, Length=160, Percent_Identity=36.875, Blast_Score=94, Evalue=4e-20, Organism=Homo sapiens, GI41406084, Length=183, Percent_Identity=34.9726775956284, Blast_Score=92, Evalue=1e-19, Organism=Homo sapiens, GI32967607, Length=182, Percent_Identity=31.8681318681319, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI33186887, Length=160, Percent_Identity=33.125, Blast_Score=78, Evalue=4e-15, Organism=Homo sapiens, GI41406082, Length=80, Percent_Identity=48.75, Blast_Score=67, Evalue=9e-12, Organism=Escherichia coli, GI1788003, Length=166, Percent_Identity=38.5542168674699, Blast_Score=129, Evalue=7e-32, Organism=Caenorhabditis elegans, GI17506887, Length=157, Percent_Identity=40.1273885350318, Blast_Score=142, Evalue=6e-35, Organism=Caenorhabditis elegans, GI17535473, Length=158, Percent_Identity=41.1392405063291, Blast_Score=142, Evalue=8e-35, Organism=Caenorhabditis elegans, GI193210707, Length=161, Percent_Identity=43.4782608695652, Blast_Score=139, Evalue=5e-34, Organism=Caenorhabditis elegans, GI71993584, Length=157, Percent_Identity=41.4012738853503, Blast_Score=134, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17550320, Length=180, Percent_Identity=34.4444444444444, Blast_Score=110, Evalue=3e-25, Organism=Caenorhabditis elegans, GI193209493, Length=180, Percent_Identity=34.4444444444444, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71999642, Length=76, Percent_Identity=42.1052631578947, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71993573, Length=95, Percent_Identity=37.8947368421053, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI193210709, Length=72, Percent_Identity=44.4444444444444, Blast_Score=66, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6322228, Length=138, Percent_Identity=55.7971014492754, Blast_Score=175, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6319721, Length=157, Percent_Identity=50.3184713375796, Blast_Score=174, Evalue=8e-45, Organism=Saccharomyces cerevisiae, GI6322826, Length=155, Percent_Identity=44.5161290322581, Blast_Score=139, Evalue=2e-34, Organism=Drosophila melanogaster, GI24656777, Length=158, Percent_Identity=44.3037974683544, Blast_Score=146, Evalue=7e-36, Organism=Drosophila melanogaster, GI24656767, Length=158, Percent_Identity=44.3037974683544, Blast_Score=145, Evalue=8e-36, Organism=Drosophila melanogaster, GI24656772, Length=158, Percent_Identity=44.3037974683544, Blast_Score=145, Evalue=1e-35, Organism=Drosophila melanogaster, GI85726443, Length=162, Percent_Identity=41.358024691358, Blast_Score=110, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000889 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00255 GSHPx [H]
EC number: 1.11.1.9
Molecular weight: Translated: 17623; Mature: 17492
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: PS00460 GLUTATHIONE_PEROXID_1 ; PS00763 GLUTATHIONE_PEROXID_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIYDFSFRRLDGSEQAMADYRGSVLLLVNTASRCGFTSQYAGLEALHRRFGPQGLAIIG CCCCCCHHHHCCCCHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEE FPCNQFGAQEPGDAGEIGAFCQKNYGVDFAMADKVDVNGANAHPLWQYLKRQKRGLLGQA CCCHHCCCCCCCCCCHHHHHHHHCCCCCEEECCCEECCCCCCCHHHHHHHHHHHCHHHHH IRWNFSKFLVDRQGRVVARFAPFTRPEKLAARIEALLK HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure SIYDFSFRRLDGSEQAMADYRGSVLLLVNTASRCGFTSQYAGLEALHRRFGPQGLAIIG CCCCCHHHHCCCCHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEE FPCNQFGAQEPGDAGEIGAFCQKNYGVDFAMADKVDVNGANAHPLWQYLKRQKRGLLGQA CCCHHCCCCCCCCCCHHHHHHHHCCCCCEEECCCEECCCCCCCHHHHHHHHHHHCHHHHH IRWNFSKFLVDRQGRVVARFAPFTRPEKLAARIEALLK HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: glutathione; H2O2
Specific reaction: 2 glutathione + H2O2 = glutathione disulfide + 2 H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10086841; 11058132 [H]