| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499017
Identifier: 34499017
GI number: 34499017
Start: 3868739
End: 3869608
Strand: Direct
Name: 34499017
Synonym: CV_3562
Alternate gene names: NA
Gene position: 3868739-3869608 (Clockwise)
Preceding gene: 34499010
Following gene: 34499019
Centisome position: 81.43
GC content: 65.06
Gene sequence:
>870_bases ATGCCCACCCAGGAAACCCTGATTCCGTTGTCCGGCTGGCGCCGCAAGCTGTACATCATCATCTACGAGGCAGACACCCG CGCCGGGCGGATTTTCGACATGGCGCTGATCGTCGCCATCCTGATCTCCGTCGCCTGCGTGATGCTGGAAAGCGTGTCCT CGATACGCCAGCGCTACGGCACGCTGCTGGCCGTGCTGGACTGGCTGTTCACCATCCTGTTCACCATCGAGTACGCGCTG CGGCTGATCTGCGTGCACAAACCGATGCGCTACGTGAAAAGCTTTTTCGGCGTCATCGACCTCCTGTCCATCCTGCCGCT GTACCTGGGCCTGTTCATCCCGGAAAGCCGCTTTCTGGCCGACATCCGCATCCTCCGTCTGCTCAGGATGTTCCGCATCC TCAAGCTCAGCCGCCACCTGGGCGAGGCCGCGCAGCTGCAGAAGGCGCTGCTGGCCAGCCGGCGCAAGATCACCGTGTTC CTGGCCACCGTCATCCTGCTGGTGATCGTGCTGGGCACCCTGATGTACGTGATCGAAGGCCCGGAACACGGCTTCACCAG CATCCCGATCAGCATCTATTGGGCCATCGTCACCCTGACCACGGTCGGTTTCGGCGACATCACGCCGAAAACGCCGATGG GCCAGGCGCTGGCCAGCCTGGTGATGATCACCGGCTACGGCATCATCGCGGTGCCCACCGGCATCGTCAGCGCGGAGATC GCCCGCAGCGCGGCGCCGGAGCCCTCCGACAACCGCTCCGCCACCCGGCTGTGTCCGCACTGTTTCAGCGAGGGGCACGA CTGGGACGCGCGCCACTGCAAGCACTGCGGCGGCCAGCTGCCGCGCCCGGCCAAGGGCGAGGTCAGCTAG
Upstream 100 bases:
>100_bases GGATGACCTAATATTGTTTGCTTATATCCAGCAAACCAAACTCCGGCCGCCCTCTCTAAACCGCTTTGTTATAGTCAATG CAAACACAGGCAAGGTTCAT
Downstream 100 bases:
>100_bases GCCTCGAGCGCCCGCTGGTAGGCCCTCAAGGCCAGCGCGTCGAAGGCCACCAGCCGGACTTCGAGCAAGGGGTGGTCGCA ACCAGACAGCCAATGGCGCA
Product: ion transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MPTQETLIPLSGWRRKLYIIIYEADTRAGRIFDMALIVAILISVACVMLESVSSIRQRYGTLLAVLDWLFTILFTIEYAL RLICVHKPMRYVKSFFGVIDLLSILPLYLGLFIPESRFLADIRILRLLRMFRILKLSRHLGEAAQLQKALLASRRKITVF LATVILLVIVLGTLMYVIEGPEHGFTSIPISIYWAIVTLTTVGFGDITPKTPMGQALASLVMITGYGIIAVPTGIVSAEI ARSAAPEPSDNRSATRLCPHCFSEGHDWDARHCKHCGGQLPRPAKGEVS
Sequences:
>Translated_289_residues MPTQETLIPLSGWRRKLYIIIYEADTRAGRIFDMALIVAILISVACVMLESVSSIRQRYGTLLAVLDWLFTILFTIEYAL RLICVHKPMRYVKSFFGVIDLLSILPLYLGLFIPESRFLADIRILRLLRMFRILKLSRHLGEAAQLQKALLASRRKITVF LATVILLVIVLGTLMYVIEGPEHGFTSIPISIYWAIVTLTTVGFGDITPKTPMGQALASLVMITGYGIIAVPTGIVSAEI ARSAAPEPSDNRSATRLCPHCFSEGHDWDARHCKHCGGQLPRPAKGEVS >Mature_288_residues PTQETLIPLSGWRRKLYIIIYEADTRAGRIFDMALIVAILISVACVMLESVSSIRQRYGTLLAVLDWLFTILFTIEYALR LICVHKPMRYVKSFFGVIDLLSILPLYLGLFIPESRFLADIRILRLLRMFRILKLSRHLGEAAQLQKALLASRRKITVFL ATVILLVIVLGTLMYVIEGPEHGFTSIPISIYWAIVTLTTVGFGDITPKTPMGQALASLVMITGYGIIAVPTGIVSAEIA RSAAPEPSDNRSATRLCPHCFSEGHDWDARHCKHCGGQLPRPAKGEVS
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cyclic nucleotide-binding domain [H]
Homologues:
Organism=Homo sapiens, GI27436974, Length=241, Percent_Identity=31.1203319502075, Blast_Score=121, Evalue=9e-28, Organism=Homo sapiens, GI9789987, Length=189, Percent_Identity=32.8042328042328, Blast_Score=114, Evalue=8e-26, Organism=Homo sapiens, GI27436986, Length=219, Percent_Identity=29.6803652968037, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI27436984, Length=219, Percent_Identity=29.6803652968037, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI27436981, Length=216, Percent_Identity=29.6296296296296, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI4826784, Length=241, Percent_Identity=30.7053941908714, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI24497462, Length=265, Percent_Identity=27.9245283018868, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI88758576, Length=265, Percent_Identity=27.9245283018868, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI20070166, Length=169, Percent_Identity=36.094674556213, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI88758565, Length=273, Percent_Identity=27.1062271062271, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI25952108, Length=249, Percent_Identity=28.5140562248996, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI119395748, Length=268, Percent_Identity=27.6119402985075, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI4826782, Length=274, Percent_Identity=27.007299270073, Blast_Score=98, Evalue=8e-21, Organism=Homo sapiens, GI45383011, Length=245, Percent_Identity=26.9387755102041, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI4504817, Length=310, Percent_Identity=25.1612903225806, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI24497460, Length=267, Percent_Identity=26.5917602996255, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI163792201, Length=264, Percent_Identity=26.8939393939394, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI24497458, Length=265, Percent_Identity=27.1698113207547, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI4826786, Length=264, Percent_Identity=26.8939393939394, Blast_Score=95, Evalue=7e-20, Organism=Homo sapiens, GI25952087, Length=183, Percent_Identity=33.3333333333333, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI21217561, Length=265, Percent_Identity=27.1698113207547, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI21217563, Length=265, Percent_Identity=27.1698113207547, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI25952092, Length=188, Percent_Identity=32.4468085106383, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI5031819, Length=120, Percent_Identity=40.8333333333333, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI4504821, Length=187, Percent_Identity=33.6898395721925, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI7657289, Length=241, Percent_Identity=28.2157676348548, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI13492973, Length=256, Percent_Identity=26.171875, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI19424136, Length=255, Percent_Identity=25.8823529411765, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI27436988, Length=193, Percent_Identity=31.6062176165803, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI27436996, Length=179, Percent_Identity=30.1675977653631, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI27436993, Length=173, Percent_Identity=30.0578034682081, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI19071574, Length=173, Percent_Identity=30.0578034682081, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI26638655, Length=221, Percent_Identity=25.3393665158371, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI6912444, Length=260, Percent_Identity=22.3076923076923, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI26638653, Length=221, Percent_Identity=25.3393665158371, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI26051268, Length=265, Percent_Identity=25.2830188679245, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI26051266, Length=245, Percent_Identity=25.3061224489796, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI26051264, Length=247, Percent_Identity=26.3157894736842, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI26051260, Length=247, Percent_Identity=26.3157894736842, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI26051262, Length=247, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI4758630, Length=253, Percent_Identity=24.901185770751, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI32479527, Length=223, Percent_Identity=25.5605381165919, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI32479525, Length=222, Percent_Identity=26.1261261261261, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI236462242, Length=221, Percent_Identity=23.0769230769231, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI236461719, Length=221, Percent_Identity=23.0769230769231, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI236461942, Length=221, Percent_Identity=23.0769230769231, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI236462079, Length=221, Percent_Identity=23.0769230769231, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI28373065, Length=221, Percent_Identity=23.0769230769231, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17544122, Length=228, Percent_Identity=29.8245614035088, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71994313, Length=279, Percent_Identity=30.8243727598566, Blast_Score=110, Evalue=9e-25, Organism=Caenorhabditis elegans, GI71989381, Length=177, Percent_Identity=35.0282485875706, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71989376, Length=177, Percent_Identity=35.0282485875706, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71989369, Length=177, Percent_Identity=35.0282485875706, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71989361, Length=177, Percent_Identity=35.0282485875706, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71994320, Length=242, Percent_Identity=31.8181818181818, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI25148255, Length=178, Percent_Identity=33.1460674157303, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI193206869, Length=178, Percent_Identity=33.1460674157303, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI71994134, Length=196, Percent_Identity=32.6530612244898, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17569273, Length=235, Percent_Identity=26.8085106382979, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI72000220, Length=175, Percent_Identity=30.8571428571429, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71986008, Length=203, Percent_Identity=33.4975369458128, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71986003, Length=203, Percent_Identity=33.4975369458128, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI71985535, Length=191, Percent_Identity=31.413612565445, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI32564088, Length=185, Percent_Identity=28.1081081081081, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI32564084, Length=185, Percent_Identity=28.1081081081081, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI32564076, Length=185, Percent_Identity=28.1081081081081, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI32564086, Length=185, Percent_Identity=28.1081081081081, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI32564090, Length=185, Percent_Identity=28.1081081081081, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI32564082, Length=185, Percent_Identity=28.1081081081081, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI32564080, Length=185, Percent_Identity=28.1081081081081, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71986011, Length=178, Percent_Identity=34.2696629213483, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI193207406, Length=200, Percent_Identity=30, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI115532628, Length=293, Percent_Identity=29.0102389078498, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI32564074, Length=293, Percent_Identity=29.0102389078498, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI32564070, Length=264, Percent_Identity=29.1666666666667, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71998749, Length=293, Percent_Identity=29.0102389078498, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI32564068, Length=293, Percent_Identity=29.0102389078498, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI32564072, Length=264, Percent_Identity=29.1666666666667, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI71986574, Length=294, Percent_Identity=21.0884353741497, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI32564066, Length=223, Percent_Identity=26.0089686098655, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI25147242, Length=223, Percent_Identity=25.1121076233184, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25147238, Length=223, Percent_Identity=25.1121076233184, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI161084970, Length=204, Percent_Identity=30.8823529411765, Blast_Score=111, Evalue=5e-25, Organism=Drosophila melanogaster, GI17737641, Length=204, Percent_Identity=30.8823529411765, Blast_Score=111, Evalue=6e-25, Organism=Drosophila melanogaster, GI24656289, Length=248, Percent_Identity=28.6290322580645, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI24656294, Length=248, Percent_Identity=28.6290322580645, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI116007764, Length=248, Percent_Identity=28.6290322580645, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI281365536, Length=248, Percent_Identity=28.6290322580645, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24642914, Length=308, Percent_Identity=26.2987012987013, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI24642916, Length=308, Percent_Identity=26.2987012987013, Blast_Score=101, Evalue=8e-22, Organism=Drosophila melanogaster, GI24642910, Length=278, Percent_Identity=26.978417266187, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI45555859, Length=278, Percent_Identity=26.978417266187, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI45549143, Length=278, Percent_Identity=26.978417266187, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI17136468, Length=178, Percent_Identity=31.4606741573034, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI28574020, Length=178, Percent_Identity=31.4606741573034, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI221330674, Length=178, Percent_Identity=31.4606741573034, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI161076829, Length=188, Percent_Identity=29.2553191489362, Blast_Score=88, Evalue=8e-18, Organism=Drosophila melanogaster, GI221330117, Length=222, Percent_Identity=26.1261261261261, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI281363095, Length=222, Percent_Identity=26.1261261261261, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI221330119, Length=222, Percent_Identity=26.1261261261261, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI281363097, Length=222, Percent_Identity=26.1261261261261, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018490 - InterPro: IPR018488 - InterPro: IPR000595 - InterPro: IPR005821 - InterPro: IPR003091 - InterPro: IPR014710 [H]
Pfam domain/function: PF00027 cNMP_binding; PF00520 Ion_trans [H]
EC number: NA
Molecular weight: Translated: 32167; Mature: 32036
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTQETLIPLSGWRRKLYIIIYEADTRAGRIFDMALIVAILISVACVMLESVSSIRQRYG CCCCCCEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLLAVLDWLFTILFTIEYALRLICVHKPMRYVKSFFGVIDLLSILPLYLGLFIPESRFLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH DIRILRLLRMFRILKLSRHLGEAAQLQKALLASRRKITVFLATVILLVIVLGTLMYVIEG HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCC PEHGFTSIPISIYWAIVTLTTVGFGDITPKTPMGQALASLVMITGYGIIAVPTGIVSAEI CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCHHHHHHHH ARSAAPEPSDNRSATRLCPHCFSEGHDWDARHCKHCGGQLPRPAKGEVS HHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PTQETLIPLSGWRRKLYIIIYEADTRAGRIFDMALIVAILISVACVMLESVSSIRQRYG CCCCCEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLLAVLDWLFTILFTIEYALRLICVHKPMRYVKSFFGVIDLLSILPLYLGLFIPESRFLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH DIRILRLLRMFRILKLSRHLGEAAQLQKALLASRRKITVFLATVILLVIVLGTLMYVIEG HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCC PEHGFTSIPISIYWAIVTLTTVGFGDITPKTPMGQALASLVMITGYGIIAVPTGIVSAEI CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCHHHHHHHH ARSAAPEPSDNRSATRLCPHCFSEGHDWDARHCKHCGGQLPRPAKGEVS HHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1522059 [H]