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The map label for this gene is dcd

Identifier: 34499009

GI number: 34499009

Start: 3863390

End: 3863962

Strand: Direct

Name: dcd

Synonym: CV_3554

Alternate gene names: 34499009

Gene position: 3863390-3863962 (Clockwise)

Preceding gene: 34499005

Following gene: 34499010

Centisome position: 81.32

GC content: 61.95

Gene sequence:

>573_bases
ATGAGCATCAAATCGGACAAGTGGATACGGCGGATGGCGGACCAGCACGGCATGATCGAGCCGTTCGAGGCCAACCAGGT
GAAAATGGCCGCCGACGGGCAGAAGCTGATCTCCTACGGCACCTCCAGCTACGGCTACGATATCCGCTGCGCCGACGAGT
TCAAGGTGTTCACCAATATCAACAGCACCATCGTCGACCCGAAGAATTTCGACCCCAACTCCTTCGTCGAAGTCTCCGGC
AAGGGCTACTGCATCATCCCGCCCAACAGCTTCGCGCTGGCGCGCACCGTCGAGTACTTCCGCATCCCGCGCAGCGTGCT
GACCGTCTGCCTGGGCAAATCCACCTACGCCCGCTGCGGCATCATCGTCAACGTCACCCCCTTCGAGCCGGAATGGGAAG
GCTATGTGACGCTGGAGTTCTCCAACACCACGCCGCTGCCGGCCAAGATCTACGCCAACGAAGGCGTGGCCCAGGTGCTG
TTCTTCGAGTCGGACGAGGAGTGCGACGTGTCGTACAAGGACCGCGCCGGCAAGTATCAGGGCCAGGTGGGCGTCACGCT
GCCGCGTCCCTGA

Upstream 100 bases:

>100_bases
CGGCCCGCTAGCGGCCGGAGCGCGGATATCAGCCACCCGACATGGCGCTAAGCGGGTAGAATCGCAGGCATTGAAATATC
GACAAAACGGGCCAACGACT

Downstream 100 bases:

>100_bases
GCGCAAGCCGCCCAAGCTGAGAAGGGATGGCCGAGGCCATCCCTTTTTGTTTGCGCCCCGCGCAAAAGCCGCTCGCATTT
TCCGCCATCTGTTCTAGGCT

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSIKSDKWIRRMADQHGMIEPFEANQVKMAADGQKLISYGTSSYGYDIRCADEFKVFTNINSTIVDPKNFDPNSFVEVSG
KGYCIIPPNSFALARTVEYFRIPRSVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVL
FFESDEECDVSYKDRAGKYQGQVGVTLPRP

Sequences:

>Translated_190_residues
MSIKSDKWIRRMADQHGMIEPFEANQVKMAADGQKLISYGTSSYGYDIRCADEFKVFTNINSTIVDPKNFDPNSFVEVSG
KGYCIIPPNSFALARTVEYFRIPRSVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVL
FFESDEECDVSYKDRAGKYQGQVGVTLPRP
>Mature_189_residues
SIKSDKWIRRMADQHGMIEPFEANQVKMAADGQKLISYGTSSYGYDIRCADEFKVFTNINSTIVDPKNFDPNSFVEVSGK
GYCIIPPNSFALARTVEYFRIPRSVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVLF
FESDEECDVSYKDRAGKYQGQVGVTLPRP

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_CHRVO (Q7NS72)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_903224.1
- ProteinModelPortal:   Q7NS72
- SMR:   Q7NS72
- GeneID:   2547954
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_3554
- NMPDR:   fig|243365.1.peg.3554
- HOGENOM:   HBG553199
- OMA:   MEYFRIP
- PhylomeDB:   Q7NS72
- ProtClustDB:   PRK00416
- BioCyc:   CVIO243365:CV_3554-MONOMER
- BRENDA:   3.5.4.13
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 21313; Mature: 21182

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKSDKWIRRMADQHGMIEPFEANQVKMAADGQKLISYGTSSYGYDIRCADEFKVFTNI
CCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHCCCCCCCEEEEECCCEEEEECC
NSTIVDPKNFDPNSFVEVSGKGYCIIPPNSFALARTVEYFRIPRSVLTVCLGKSTYARCG
CCEEECCCCCCCCCEEEECCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHCCCCCHHEEE
IIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVLFFESDEECDVSYKDRAGKYQ
EEEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCC
GQVGVTLPRP
CEEEEECCCC
>Mature Secondary Structure 
SIKSDKWIRRMADQHGMIEPFEANQVKMAADGQKLISYGTSSYGYDIRCADEFKVFTNI
CCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHCCCCCCCEEEEECCCEEEEECC
NSTIVDPKNFDPNSFVEVSGKGYCIIPPNSFALARTVEYFRIPRSVLTVCLGKSTYARCG
CCEEECCCCCCCCCEEEECCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHCCCCCHHEEE
IIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVLFFESDEECDVSYKDRAGKYQ
EEEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCC
GQVGVTLPRP
CEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782