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The map label for this gene is ygcF [C]

Identifier: 34498964

GI number: 34498964

Start: 3808872

End: 3809507

Strand: Direct

Name: ygcF [C]

Synonym: CV_3509

Alternate gene names: 34498964

Gene position: 3808872-3809507 (Clockwise)

Preceding gene: 34498963

Following gene: 34498965

Centisome position: 80.17

GC content: 69.18

Gene sequence:

>636_bases
GTGACTACCTATACCGTCAAGGAAATCTTCTACACGCTGCAAGGCGAAGGCCGTCAGGCCGGCCGCGCGGCGGTGTTCTG
CCGCTTCGCCGGCTGCAATCTGTGGTCGGGCCGCGAGGAGGACCGCGCCAAGGCGGTCTGCCAATTTTGCGACACCGACT
TCGTCGGCGCCGGACCCGACGGCGGCAAGTTCGACGGCGCGGCGGCGCTGGCCGCGCGCATCGCCGCCGAGTGGCCGAAG
GATGCCGGCGGCTCGCCCTACGTGGTCTGCACCGGCGGCGAGCCGCTGCTGCAGCTGGACGCGGAGCTGATCGGCGCGCT
GCACGCCCAAGGCTTCGAAATCGCCGTCGAGACCAACGGCACCGTCGCCGCGCCGGCCGGGCTGGACTGGATCTGCGTCA
GCCCCAAGGCGGGGGCAGAATTGAAGCAACGCGCCGGAGACGAACTGAAGCTGGTCTACCCGCAGGCTGCCCAGATGCCG
GAAACCGTGGCCGATCTGGACTTCGGCACCTTCTACCTGCAGCCGATGGACGGCCCCGAGCTGGCGGCCAACACCCGCGC
CGCCATCGCCTACTGCATGGCGCATCCGCAATGGCGGCTGTCGGTGCAGACCCACAAGGTGGTCGACATCCGCTGA

Upstream 100 bases:

>100_bases
GACCTGATGGAAAGCGACGACGCCGGCGTGTCGCTGCATTTCCGCCAGGACATGCGCTGGCCGCTGCTGTGACCGCCGCC
CTCGATTGCGAGAAAATGTC

Downstream 100 bases:

>100_bases
GCGCCGCAACGCGCCTGTCTGCCCGCATGCCGGTGTCCAACGGCGTGCGCCCGATGCCCGGCATGCCCGGGCATCTTCGT
CTCCGCGCCGCCAACGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Organic Radical Activating; Organic Radical Activating Protein; Organic Radical Activating-Like Protein; Queuosine Biosynthesis Protein QueE; Radical SAM; NrdG Protein; Radical Sam Domain Protein; Organic Radical Activating Protein; GntS Family Protein; Radical SAM Superfamily

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MTTYTVKEIFYTLQGEGRQAGRAAVFCRFAGCNLWSGREEDRAKAVCQFCDTDFVGAGPDGGKFDGAAALAARIAAEWPK
DAGGSPYVVCTGGEPLLQLDAELIGALHAQGFEIAVETNGTVAAPAGLDWICVSPKAGAELKQRAGDELKLVYPQAAQMP
ETVADLDFGTFYLQPMDGPELAANTRAAIAYCMAHPQWRLSVQTHKVVDIR

Sequences:

>Translated_211_residues
MTTYTVKEIFYTLQGEGRQAGRAAVFCRFAGCNLWSGREEDRAKAVCQFCDTDFVGAGPDGGKFDGAAALAARIAAEWPK
DAGGSPYVVCTGGEPLLQLDAELIGALHAQGFEIAVETNGTVAAPAGLDWICVSPKAGAELKQRAGDELKLVYPQAAQMP
ETVADLDFGTFYLQPMDGPELAANTRAAIAYCMAHPQWRLSVQTHKVVDIR
>Mature_210_residues
TTYTVKEIFYTLQGEGRQAGRAAVFCRFAGCNLWSGREEDRAKAVCQFCDTDFVGAGPDGGKFDGAAALAARIAAEWPKD
AGGSPYVVCTGGEPLLQLDAELIGALHAQGFEIAVETNGTVAAPAGLDWICVSPKAGAELKQRAGDELKLVYPQAAQMPE
TVADLDFGTFYLQPMDGPELAANTRAAIAYCMAHPQWRLSVQTHKVVDIR

Specific function: Unknown

COG id: COG0602

COG function: function code O; Organic radical activating enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22531; Mature: 22399

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTYTVKEIFYTLQGEGRQAGRAAVFCRFAGCNLWSGREEDRAKAVCQFCDTDFVGAGPD
CCEEEEEHEEEEECCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
GGKFDGAAALAARIAAEWPKDAGGSPYVVCTGGEPLLQLDAELIGALHAQGFEIAVETNG
CCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCC
TVAAPAGLDWICVSPKAGAELKQRAGDELKLVYPQAAQMPETVADLDFGTFYLQPMDGPE
CEECCCCCEEEEECCCCCHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCEEEEECCCCCC
LAANTRAAIAYCMAHPQWRLSVQTHKVVDIR
CCCCHHHHHHHHHCCCCEEEEEEEEEEEEEC
>Mature Secondary Structure 
TTYTVKEIFYTLQGEGRQAGRAAVFCRFAGCNLWSGREEDRAKAVCQFCDTDFVGAGPD
CEEEEEHEEEEECCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
GGKFDGAAALAARIAAEWPKDAGGSPYVVCTGGEPLLQLDAELIGALHAQGFEIAVETNG
CCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCC
TVAAPAGLDWICVSPKAGAELKQRAGDELKLVYPQAAQMPETVADLDFGTFYLQPMDGPE
CEECCCCCEEEEECCCCCHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCEEEEECCCCCC
LAANTRAAIAYCMAHPQWRLSVQTHKVVDIR
CCCCHHHHHHHHHCCCCEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA