| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is eprA1 [H]
Identifier: 34498961
GI number: 34498961
Start: 3805754
End: 3806848
Strand: Reverse
Name: eprA1 [H]
Synonym: CV_3506
Alternate gene names: 34498961
Gene position: 3806848-3805754 (Counterclockwise)
Preceding gene: 34498973
Following gene: 34498960
Centisome position: 80.13
GC content: 64.29
Gene sequence:
>1095_bases ATGGACAAGAGATTACCCATCGCGGCGGCGGCCCTGCTGCTCGCCTCATCCGCATTCGCCGGCGACCTGCAAGTCAGCCT GGGCCAGCCCACGGTCAGCGCTTCGCAGGACGTGGACGTGACCGTCACCTATCGCAACACCGGCAAGGAAACGCTGCATG TCTACCGCTGGTACCTGCCGGGCAAAGAGCTGCAGGAACAGTTCCTGGCGGTGAACGTGAACGGCAAGCAGGCTGAATAC CTGGGGCCGCGTTACAAGAGGGTGGTGCCTTCGCTGCGCGACACGGTTTCACTGGCGCCGGGCGCCACGCTGAACGCCAA GGTGAGGGTGTCCGATTATTACGACCTGTCGAAGGGCGGCCAGCTGAGCGTGCGCTTCGAGAGCAGCAGCAACAAGGTGC TGAACCACAGCCTGCCGGCCGGCGTCAGCGCCAAGTCGGCGGGAACGACCCCGCCGGCGGACGAAGCGATCACGTCGAAC GCGGTCAGCGGCTACAGCAGCGGCAAGATCAGCCCGTTGCTGCAGCGTTCGCAGACGGCGAAGCTGGAGTGGCAGGCGCT GGCCCGCACCGCGGTCAGCGGCGTGACCTATGCCGGCAACTGCTCGGTCACCCAGCAGAACCAGTCCAAGGATGGCGTCA CCGCCGCCAGCGCGATGGCCGACGAGACCAATGCTTATCTGAATGGCACGCCGTCCGGCACCCAGCGCTACACCACCTGG TTCGGCAAGTACAGCCAGGCCAACTGGACGACCGCCAAGTCGCATTACGTGAAGATCAAGGACGCGCTGGATACCAAGCC GATCAAGCTGGATTGCAGTTGCACCGATGGCGGCACCTATGCCTACGTCTATCCGTCCCAGCCCTACACCATCTATCTGT GCGGCGCTTTCTGGACGGCTCCGACCAAGGGCACCGACTCCAAGGGCGGCACGCTGGTGCATGAGCTCTCCCACTTCACC GTGGTGGCGGGCACCGACGACCACGTCTACGGCCAGGCCGGCGCCAAGAACCTGGCGAAGACCAATCCGACCCAGGCGCT GAACAACGCGGACAACCACGAATATTTCGCCGAGAACACGCCTTACCAGCCCTGA
Upstream 100 bases:
>100_bases GATCATGACAAGTTCATGCAATTAATGATCTGCGCATGATGATTGTGCGTTTTATAACTTTTCGTGATGTGCAAAGCATC CAGACAACAAAGGGAAAACA
Downstream 100 bases:
>100_bases GCCGGCAAGGAGGATCCGTCTCCAACCCGCCCGCCTCGGCCGGCGGGTTTTTCATGGCGGGTCGTCATGCGGCCGCCATG ATGGGCGGGCACGGGTAATG
Product: protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MDKRLPIAAAALLLASSAFAGDLQVSLGQPTVSASQDVDVTVTYRNTGKETLHVYRWYLPGKELQEQFLAVNVNGKQAEY LGPRYKRVVPSLRDTVSLAPGATLNAKVRVSDYYDLSKGGQLSVRFESSSNKVLNHSLPAGVSAKSAGTTPPADEAITSN AVSGYSSGKISPLLQRSQTAKLEWQALARTAVSGVTYAGNCSVTQQNQSKDGVTAASAMADETNAYLNGTPSGTQRYTTW FGKYSQANWTTAKSHYVKIKDALDTKPIKLDCSCTDGGTYAYVYPSQPYTIYLCGAFWTAPTKGTDSKGGTLVHELSHFT VVAGTDDHVYGQAGAKNLAKTNPTQALNNADNHEYFAENTPYQP
Sequences:
>Translated_364_residues MDKRLPIAAAALLLASSAFAGDLQVSLGQPTVSASQDVDVTVTYRNTGKETLHVYRWYLPGKELQEQFLAVNVNGKQAEY LGPRYKRVVPSLRDTVSLAPGATLNAKVRVSDYYDLSKGGQLSVRFESSSNKVLNHSLPAGVSAKSAGTTPPADEAITSN AVSGYSSGKISPLLQRSQTAKLEWQALARTAVSGVTYAGNCSVTQQNQSKDGVTAASAMADETNAYLNGTPSGTQRYTTW FGKYSQANWTTAKSHYVKIKDALDTKPIKLDCSCTDGGTYAYVYPSQPYTIYLCGAFWTAPTKGTDSKGGTLVHELSHFT VVAGTDDHVYGQAGAKNLAKTNPTQALNNADNHEYFAENTPYQP >Mature_364_residues MDKRLPIAAAALLLASSAFAGDLQVSLGQPTVSASQDVDVTVTYRNTGKETLHVYRWYLPGKELQEQFLAVNVNGKQAEY LGPRYKRVVPSLRDTVSLAPGATLNAKVRVSDYYDLSKGGQLSVRFESSSNKVLNHSLPAGVSAKSAGTTPPADEAITSN AVSGYSSGKISPLLQRSQTAKLEWQALARTAVSGVTYAGNCSVTQQNQSKDGVTAASAMADETNAYLNGTPSGTQRYTTW FGKYSQANWTTAKSHYVKIKDALDTKPIKLDCSCTDGGTYAYVYPSQPYTIYLCGAFWTAPTKGTDSKGGTLVHELSHFT VVAGTDDHVYGQAGAKNLAKTNPTQALNNADNHEYFAENTPYQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M35 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001384 [H]
Pfam domain/function: PF02102 Peptidase_M35 [H]
EC number: NA
Molecular weight: Translated: 39053; Mature: 39053
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKRLPIAAAALLLASSAFAGDLQVSLGQPTVSASQDVDVTVTYRNTGKETLHVYRWYLP CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEECC GKELQEQFLAVNVNGKQAEYLGPRYKRVVPSLRDTVSLAPGATLNAKVRVSDYYDLSKGG CHHHHCEEEEEECCCCCHHHCCCHHHHHHHHHHHHEEECCCCEEEEEEEEECCEECCCCC QLSVRFESSSNKVLNHSLPAGVSAKSAGTTPPADEAITSNAVSGYSSGKISPLLQRSQTA EEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCC KLEWQALARTAVSGVTYAGNCSVTQQNQSKDGVTAASAMADETNAYLNGTPSGTQRYTTW CHHHHHHHHHHHHCCEEECCCEEECCCCCCCCCCHHHHHHCCCCCEECCCCCCCCEEEEE FGKYSQANWTTAKSHYVKIKDALDTKPIKLDCSCTDGGTYAYVYPSQPYTIYLCGAFWTA ECCCCCCCCEECCCEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEEEECC PTKGTDSKGGTLVHELSHFTVVAGTDDHVYGQAGAKNLAKTNPTQALNNADNHEYFAENT CCCCCCCCCCEEEEECCEEEEEECCCCCEECCCCCCHHHCCCCHHHHCCCCCCCEECCCC PYQP CCCC >Mature Secondary Structure MDKRLPIAAAALLLASSAFAGDLQVSLGQPTVSASQDVDVTVTYRNTGKETLHVYRWYLP CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEECC GKELQEQFLAVNVNGKQAEYLGPRYKRVVPSLRDTVSLAPGATLNAKVRVSDYYDLSKGG CHHHHCEEEEEECCCCCHHHCCCHHHHHHHHHHHHEEECCCCEEEEEEEEECCEECCCCC QLSVRFESSSNKVLNHSLPAGVSAKSAGTTPPADEAITSNAVSGYSSGKISPLLQRSQTA EEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCC KLEWQALARTAVSGVTYAGNCSVTQQNQSKDGVTAASAMADETNAYLNGTPSGTQRYTTW CHHHHHHHHHHHHCCEEECCCEEECCCCCCCCCCHHHHHHCCCCCEECCCCCCCCEEEEE FGKYSQANWTTAKSHYVKIKDALDTKPIKLDCSCTDGGTYAYVYPSQPYTIYLCGAFWTA ECCCCCCCCEECCCEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEEEECC PTKGTDSKGGTLVHELSHFTVVAGTDDHVYGQAGAKNLAKTNPTQALNNADNHEYFAENT CCCCCCCCCCEEEEECCEEEEEECCCCCEECCCCCCHHHCCCCHHHHCCCCCCCEECCCC PYQP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA