| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498930
Identifier: 34498930
GI number: 34498930
Start: 3768015
End: 3769763
Strand: Direct
Name: 34498930
Synonym: CV_3475
Alternate gene names: NA
Gene position: 3768015-3769763 (Clockwise)
Preceding gene: 34498928
Following gene: 34498935
Centisome position: 79.31
GC content: 45.97
Gene sequence:
>1749_bases ATGCTCTCCATCATGATTGCCAGCAGCCTGGCTGCCTGCGGCGGAGGCGGCTCCGGCGGCGCCTCGACTTCATCGCAAGG CGGCGGCGCAGCCAGTCAATACCGCGTCGCCGGCCAGGTTCAGAAAGGCCCGTTCATCTTCGGCTCCCAGATCTGGATTT CCGAGCTGAACGACAAGCTATCACCCACTGGCAAGGTATACATGACACAAACCAAGGATGACCTGGGCAACTTCGGCATA CCTGGAGCCATCGACGCCAAGCTGGTGGAATTGACTGGCAGCGGCTACTACATGAACGAGTTGACCGGCACGCTGTCTAC CGCGCCGGTCACCTTGAATGCAGTTGCCGACTTGAGCACTTCCAAGTCACTGACTATCAACTTGTTGACCACACTGCAGG CCCCCCGCCTAAAAGCCTTGATGACTAGCGGTAGTGACTACCAAGCCGCCTACACTCAATCACGCAATGAAGTGCTGGCC GTGTTCGGCATTGATGCGGGCAAGGTGGACAATCTGGGCTCGCTGTTCGATATGCGTATCAACGGCACAGCCGACCAAGA CTCGATCTTACTGGCAACGTCTTCCATCTTGTCACAAGCTGCGAAAAATCAGATATCGCTCCCCGATACTGAAACAGCGG AGTTATCTCATTTAATCAGCACAATTGCCAGCGATCTGACCAATAATGGCAAACTATCCTCACAATCTCTGCAAGATCAA ATCAAGCTAGCTGCAACACAAATAGACCTAGATGCTGTTCGTCGAAATGTAGAAACTTACTACACTGGCAGAGGTATCAA GATAGTTGCGCCTAAATTCGAAGAATGGGTAGATAAAGATAATTCAGGAATTATTCCTCGACGAATGATAGAGCCCAGCG CGCAAAATTTCATCCCTACCGAAAACGCAGCCCCAGACAATCTTTACACTAGCAATTCGATAAAAATAGATGGCCTCAAA CAAGACGAATCAATATTCGTACAATTAATCGACAATGCAACCCTTATTAAAAACAATCAAATAGCAAGCAGCGCCACCTC CGCAAAAAATGGTGACACTCTACAAGTAAAAGCAAGCGCCCCATCGTTTGGAGAATCAAAAGAAACTAGAGTAAAATTAG GCAATAAAAACATCAGCTGGCTTTTAAAAAGTAAAAATACTGAGTTAAAATTTGACAACACATACTATGACCAATCAACC CCGACACCCATAATTAGTACAAAGAATGATGTAAGTTATATCGCTTTCTCCTTCACTCCCGATGTTGACTTCGTCGCAAG ATATGCAGGCATAGACGGATCAAGCAAGTCAAGCCTTAATATGTCAATCTATGACGAAACGACTGCCAACCCCAATAATA GCTACGCGATTCCTGGAAATTCACTAATCACAAGCAACTTAAAGACTAGTTCCTTTGGTCAAAAACCTATTCCATCTGTG AACGGTAAATTAAAATCAAACTTTTACCCAAATGGAATTCAATTTTCACTAGGCTCGGATGGAATAAGTCTTAAGAAGGG GAATAGATACTGGCTTGTCGTAAGCTCCATTGACAAATCAGCAATAGAAATAAAAGGAAATCCAGGGAATTACGACAGAC AAATAACCTCTATCACCTACAGTAAAAATGGGAAATATTGGGTAGGCTGCCAGGATGGGACAGACTGGAACCCCAATTAC TCACCATACTGCGCAGGAGGTGGTCTATTCTTATTTAACAAGCCGCCAGCCATCTGGATTGCCAACTAA
Upstream 100 bases:
>100_bases GCCATTTTAATTACAAAATAGCTTCTCCATCAGTATGCTACTGATGGTTTTTCCGTGAAACACAAGAAGAAAGTGCGCAA TGACAAAATTTACACGCAGA
Downstream 100 bases:
>100_bases AATAAAAGCGCCACCAAATGGTGGCGCTTTTATTTGATAGATTAAATTTGGCTTACTGGAATCTTGCCAATCTTCACCCG CCACTCCGCCGGGCCGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 582; Mature: 582
Protein sequence:
>582_residues MLSIMIASSLAACGGGGSGGASTSSQGGGAASQYRVAGQVQKGPFIFGSQIWISELNDKLSPTGKVYMTQTKDDLGNFGI PGAIDAKLVELTGSGYYMNELTGTLSTAPVTLNAVADLSTSKSLTINLLTTLQAPRLKALMTSGSDYQAAYTQSRNEVLA VFGIDAGKVDNLGSLFDMRINGTADQDSILLATSSILSQAAKNQISLPDTETAELSHLISTIASDLTNNGKLSSQSLQDQ IKLAATQIDLDAVRRNVETYYTGRGIKIVAPKFEEWVDKDNSGIIPRRMIEPSAQNFIPTENAAPDNLYTSNSIKIDGLK QDESIFVQLIDNATLIKNNQIASSATSAKNGDTLQVKASAPSFGESKETRVKLGNKNISWLLKSKNTELKFDNTYYDQST PTPIISTKNDVSYIAFSFTPDVDFVARYAGIDGSSKSSLNMSIYDETTANPNNSYAIPGNSLITSNLKTSSFGQKPIPSV NGKLKSNFYPNGIQFSLGSDGISLKKGNRYWLVVSSIDKSAIEIKGNPGNYDRQITSITYSKNGKYWVGCQDGTDWNPNY SPYCAGGGLFLFNKPPAIWIAN
Sequences:
>Translated_582_residues MLSIMIASSLAACGGGGSGGASTSSQGGGAASQYRVAGQVQKGPFIFGSQIWISELNDKLSPTGKVYMTQTKDDLGNFGI PGAIDAKLVELTGSGYYMNELTGTLSTAPVTLNAVADLSTSKSLTINLLTTLQAPRLKALMTSGSDYQAAYTQSRNEVLA VFGIDAGKVDNLGSLFDMRINGTADQDSILLATSSILSQAAKNQISLPDTETAELSHLISTIASDLTNNGKLSSQSLQDQ IKLAATQIDLDAVRRNVETYYTGRGIKIVAPKFEEWVDKDNSGIIPRRMIEPSAQNFIPTENAAPDNLYTSNSIKIDGLK QDESIFVQLIDNATLIKNNQIASSATSAKNGDTLQVKASAPSFGESKETRVKLGNKNISWLLKSKNTELKFDNTYYDQST PTPIISTKNDVSYIAFSFTPDVDFVARYAGIDGSSKSSLNMSIYDETTANPNNSYAIPGNSLITSNLKTSSFGQKPIPSV NGKLKSNFYPNGIQFSLGSDGISLKKGNRYWLVVSSIDKSAIEIKGNPGNYDRQITSITYSKNGKYWVGCQDGTDWNPNY SPYCAGGGLFLFNKPPAIWIAN >Mature_582_residues MLSIMIASSLAACGGGGSGGASTSSQGGGAASQYRVAGQVQKGPFIFGSQIWISELNDKLSPTGKVYMTQTKDDLGNFGI PGAIDAKLVELTGSGYYMNELTGTLSTAPVTLNAVADLSTSKSLTINLLTTLQAPRLKALMTSGSDYQAAYTQSRNEVLA VFGIDAGKVDNLGSLFDMRINGTADQDSILLATSSILSQAAKNQISLPDTETAELSHLISTIASDLTNNGKLSSQSLQDQ IKLAATQIDLDAVRRNVETYYTGRGIKIVAPKFEEWVDKDNSGIIPRRMIEPSAQNFIPTENAAPDNLYTSNSIKIDGLK QDESIFVQLIDNATLIKNNQIASSATSAKNGDTLQVKASAPSFGESKETRVKLGNKNISWLLKSKNTELKFDNTYYDQST PTPIISTKNDVSYIAFSFTPDVDFVARYAGIDGSSKSSLNMSIYDETTANPNNSYAIPGNSLITSNLKTSSFGQKPIPSV NGKLKSNFYPNGIQFSLGSDGISLKKGNRYWLVVSSIDKSAIEIKGNPGNYDRQITSITYSKNGKYWVGCQDGTDWNPNY SPYCAGGGLFLFNKPPAIWIAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62411; Mature: 62411
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSIMIASSLAACGGGGSGGASTSSQGGGAASQYRVAGQVQKGPFIFGSQIWISELNDKL CEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEECCEEEEEHHCCCC SPTGKVYMTQTKDDLGNFGIPGAIDAKLVELTGSGYYMNELTGTLSTAPVTLNAVADLST CCCCEEEEEECCHHCCCCCCCCCCCEEEEEEECCCEEEHHHCCCCEECCEEEEEEECCCC SKSLTINLLTTLQAPRLKALMTSGSDYQAAYTQSRNEVLAVFGIDAGKVDNLGSLFDMRI CCEEEEEEEEECCCCCEEHEEECCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEE NGTADQDSILLATSSILSQAAKNQISLPDTETAELSHLISTIASDLTNNGKLSSQSLQDQ CCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH IKLAATQIDLDAVRRNVETYYTGRGIKIVAPKFEEWVDKDNSGIIPRRMIEPSAQNFIPT HHHHHEEEEHHHHHCCCCEEEECCCEEEECCCHHHHHCCCCCCCCCHHHCCCCHHCCCCC ENAAPDNLYTSNSIKIDGLKQDESIFVQLIDNATLIKNNQIASSATSAKNGDTLQVKASA CCCCCCCCEECCCEEECCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCEEEEEECC PSFGESKETRVKLGNKNISWLLKSKNTELKFDNTYYDQSTPTPIISTKNDVSYIAFSFTP CCCCCCCCEEEEECCCCEEEEEECCCCEEEECCEECCCCCCCCEEECCCCCEEEEEEECC DVDFVARYAGIDGSSKSSLNMSIYDETTANPNNSYAIPGNSLITSNLKTSSFGQKPIPSV CHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCC NGKLKSNFYPNGIQFSLGSDGISLKKGNRYWLVVSSIDKSAIEIKGNPGNYDRQITSITY CCEEECCCCCCCEEEEECCCCEEEECCCEEEEEEECCCCCEEEEECCCCCCCCEEEEEEE SKNGKYWVGCQDGTDWNPNYSPYCAGGGLFLFNKPPAIWIAN ECCCCEEEEECCCCCCCCCCCCEECCCCEEEECCCCEEEEEC >Mature Secondary Structure MLSIMIASSLAACGGGGSGGASTSSQGGGAASQYRVAGQVQKGPFIFGSQIWISELNDKL CEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEECCEEEEEHHCCCC SPTGKVYMTQTKDDLGNFGIPGAIDAKLVELTGSGYYMNELTGTLSTAPVTLNAVADLST CCCCEEEEEECCHHCCCCCCCCCCCEEEEEEECCCEEEHHHCCCCEECCEEEEEEECCCC SKSLTINLLTTLQAPRLKALMTSGSDYQAAYTQSRNEVLAVFGIDAGKVDNLGSLFDMRI CCEEEEEEEEECCCCCEEHEEECCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEE NGTADQDSILLATSSILSQAAKNQISLPDTETAELSHLISTIASDLTNNGKLSSQSLQDQ CCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH IKLAATQIDLDAVRRNVETYYTGRGIKIVAPKFEEWVDKDNSGIIPRRMIEPSAQNFIPT HHHHHEEEEHHHHHCCCCEEEECCCEEEECCCHHHHHCCCCCCCCCHHHCCCCHHCCCCC ENAAPDNLYTSNSIKIDGLKQDESIFVQLIDNATLIKNNQIASSATSAKNGDTLQVKASA CCCCCCCCEECCCEEECCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCEEEEEECC PSFGESKETRVKLGNKNISWLLKSKNTELKFDNTYYDQSTPTPIISTKNDVSYIAFSFTP CCCCCCCCEEEEECCCCEEEEEECCCCEEEECCEECCCCCCCCEEECCCCCEEEEEEECC DVDFVARYAGIDGSSKSSLNMSIYDETTANPNNSYAIPGNSLITSNLKTSSFGQKPIPSV CHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCC NGKLKSNFYPNGIQFSLGSDGISLKKGNRYWLVVSSIDKSAIEIKGNPGNYDRQITSITY CCEEECCCCCCCEEEEECCCCEEEECCCEEEEEEECCCCCEEEEECCCCCCCCEEEEEEE SKNGKYWVGCQDGTDWNPNYSPYCAGGGLFLFNKPPAIWIAN ECCCCEEEEECCCCCCCCCCCCEECCCCEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA