| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is pyrG
Identifier: 34498912
GI number: 34498912
Start: 3752408
End: 3754048
Strand: Direct
Name: pyrG
Synonym: CV_3457
Alternate gene names: 34498912
Gene position: 3752408-3754048 (Clockwise)
Preceding gene: 34498909
Following gene: 34498914
Centisome position: 78.98
GC content: 63.86
Gene sequence:
>1641_bases ATGACCAAGTACATCTTCGTAACCGGTGGCGTGGTGTCCTCCCTGGGCAAGGGCATTGCCGCTGCGTCCATCGCCGCGAT CCTCGAATCCCGCGGGCTGAAAGTCACCATGCTGAAGCTCGATCCCTATATCAACGTCGACCCGGGCACGATGAGCCCCT TCCAGCACGGCGAGGTGTTCGTCACCGAAGACGGCGCGGAAACCGACCTTGACCTCGGCCACTACGAGCGCTTCATCCAC GCCAAGATGAAGAAGAGCAACAACTTCACCACCGGCCAGGTGTACGAATCGGTCATCACCAAGGAGCGCCGCGGCGACTA CCTGGGCGGCACCGTGCAGGTCATCCCGCACATCACCGACGAAATCAAGCTGAAAATGGGCGAAGGCGCGGCTGACGCCG ACGTCGCCATCGTCGAGATCGGCGGCACCGTCGGCGACATCGAATCGCTGCCCTTCCTGGAAGCCATCCGCCAGATGCGC TCCAACCACGGCCGCAAGAACACGCTCTACGTGCACCTCTCCTACGTGCCCTACATCGCCACCGCCGGCGAAATCAAGAC CAAGCCGACCCAGCACTCGGTGAAGGAGCTGCGCGAGATCGGCATCCAGCCGGACATCCTGCTGTGCCGGATGGACCGCG AGCTGCCGGAGGACGAAAAGCGCAAGATCGCGCTGTTCTGCAACGTGGAAGAGAACGCGGTGATCGGCTGTTACGACTCC GACTCCATCTACAAGGTGCCGGGCATGCTGCACGCCCAGGGCATCGACGACATCATCGCCGAACAGCTGCAACTGGACCT GCCCCAGGCCGACCTGTCCGCCTGGGACCGCATCATCGACGCGATCGAAAAGCCGGACCACGCGATCAAGATCGCGATGG TGGGCAAGTACGTCGATCTGACCGAATCGTACAAATCGCTGACCGAAGCGCTGAAGCACGCCGGCATCCACACCCGCACC AAGGTCGACATCATTTACGTCGACTCCGAGGAAATCGAGCGCGACGGCGCCGAGTCTCTGCGCGACATGGACGCCATCCT GGTGCCGGGCGGCTTCGGCAAGCGCGGCGTGGAAGGCAAGATCAAGGCGGTGAAATTCGCCCGCGAGAACGACATCCCCT ACCTGGGCATCTGCCTGGGCATGCAGATCGCGCTGATCGAATACGCCCGCGACGTGGCCGGCATGGCCGGCGCCAACTCC ACCGAGTTCGACCTGGACACCAACTTCCCGGTGGTGGCGCTGATCGACGAGTGGGTGAACCACGACGGCAAGATCGAGAA GCGCGACGAGAACTCCAATATGGGCGGCACCATGCGCCTGGGCGGCCAGCAGTGCGACCTGGTTCCCGGCTCGCTGGCCG CGCGCGTCTACGGCAGCACAGAGATCACCGAGCGCCACCGCCACCGCTACGAGGTCAACAACTACTACATCCAGCGCCTG GAACAGGCCGGCCTGACCATCAGCGGCCGCTCCGCCGGCCACGAGAAGCTGGTCGAGACCATCGAGCTGACGGGCCACCG CTGGTTCTTCGCCTGCCAGTTCCACCCGGAATTCACCTCCACCCCGCGTGACGGCCATCCGCTGTTCATCGCCTACGTGA AGGCCGCGCTGGCGCACCAGGCCGACAAGCAGGCCAGCTGA
Upstream 100 bases:
>100_bases CATTCTGCGCCGCAGACGGGGCCGCAACAAGATGCAGCAAGTGATTCAACTTCGTCCGATTTCAGGGTAAAATCCCGGAT TCCCACAGAGCCGTAATCTC
Downstream 100 bases:
>100_bases TTGGCAATTGCTGACCACGCTCAATGCGCCCCATGAGCGTGCGCAGCACAATCCCAAGCTGAGCACTTGCTGTAACACAC AGCTGGTAATGTCCGCCCGC
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MTKYIFVTGGVVSSLGKGIAAASIAAILESRGLKVTMLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFIH AKMKKSNNFTTGQVYESVITKERRGDYLGGTVQVIPHITDEIKLKMGEGAADADVAIVEIGGTVGDIESLPFLEAIRQMR SNHGRKNTLYVHLSYVPYIATAGEIKTKPTQHSVKELREIGIQPDILLCRMDRELPEDEKRKIALFCNVEENAVIGCYDS DSIYKVPGMLHAQGIDDIIAEQLQLDLPQADLSAWDRIIDAIEKPDHAIKIAMVGKYVDLTESYKSLTEALKHAGIHTRT KVDIIYVDSEEIERDGAESLRDMDAILVPGGFGKRGVEGKIKAVKFARENDIPYLGICLGMQIALIEYARDVAGMAGANS TEFDLDTNFPVVALIDEWVNHDGKIEKRDENSNMGGTMRLGGQQCDLVPGSLAARVYGSTEITERHRHRYEVNNYYIQRL EQAGLTISGRSAGHEKLVETIELTGHRWFFACQFHPEFTSTPRDGHPLFIAYVKAALAHQADKQAS
Sequences:
>Translated_546_residues MTKYIFVTGGVVSSLGKGIAAASIAAILESRGLKVTMLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFIH AKMKKSNNFTTGQVYESVITKERRGDYLGGTVQVIPHITDEIKLKMGEGAADADVAIVEIGGTVGDIESLPFLEAIRQMR SNHGRKNTLYVHLSYVPYIATAGEIKTKPTQHSVKELREIGIQPDILLCRMDRELPEDEKRKIALFCNVEENAVIGCYDS DSIYKVPGMLHAQGIDDIIAEQLQLDLPQADLSAWDRIIDAIEKPDHAIKIAMVGKYVDLTESYKSLTEALKHAGIHTRT KVDIIYVDSEEIERDGAESLRDMDAILVPGGFGKRGVEGKIKAVKFARENDIPYLGICLGMQIALIEYARDVAGMAGANS TEFDLDTNFPVVALIDEWVNHDGKIEKRDENSNMGGTMRLGGQQCDLVPGSLAARVYGSTEITERHRHRYEVNNYYIQRL EQAGLTISGRSAGHEKLVETIELTGHRWFFACQFHPEFTSTPRDGHPLFIAYVKAALAHQADKQAS >Mature_545_residues TKYIFVTGGVVSSLGKGIAAASIAAILESRGLKVTMLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFIHA KMKKSNNFTTGQVYESVITKERRGDYLGGTVQVIPHITDEIKLKMGEGAADADVAIVEIGGTVGDIESLPFLEAIRQMRS NHGRKNTLYVHLSYVPYIATAGEIKTKPTQHSVKELREIGIQPDILLCRMDRELPEDEKRKIALFCNVEENAVIGCYDSD SIYKVPGMLHAQGIDDIIAEQLQLDLPQADLSAWDRIIDAIEKPDHAIKIAMVGKYVDLTESYKSLTEALKHAGIHTRTK VDIIYVDSEEIERDGAESLRDMDAILVPGGFGKRGVEGKIKAVKFARENDIPYLGICLGMQIALIEYARDVAGMAGANST EFDLDTNFPVVALIDEWVNHDGKIEKRDENSNMGGTMRLGGQQCDLVPGSLAARVYGSTEITERHRHRYEVNNYYIQRLE QAGLTISGRSAGHEKLVETIELTGHRWFFACQFHPEFTSTPRDGHPLFIAYVKAALAHQADKQAS
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=568, Percent_Identity=43.8380281690141, Blast_Score=478, Evalue=1e-135, Organism=Homo sapiens, GI28559085, Length=558, Percent_Identity=43.5483870967742, Blast_Score=464, Evalue=1e-130, Organism=Homo sapiens, GI28559083, Length=558, Percent_Identity=43.5483870967742, Blast_Score=464, Evalue=1e-130, Organism=Homo sapiens, GI221316689, Length=558, Percent_Identity=43.5483870967742, Blast_Score=464, Evalue=1e-130, Organism=Escherichia coli, GI1789142, Length=539, Percent_Identity=65.3061224489796, Blast_Score=721, Evalue=0.0, Organism=Caenorhabditis elegans, GI25148299, Length=609, Percent_Identity=37.9310344827586, Blast_Score=422, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6322563, Length=570, Percent_Identity=42.280701754386, Blast_Score=454, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6319432, Length=569, Percent_Identity=41.8277680140597, Blast_Score=438, Evalue=1e-123, Organism=Drosophila melanogaster, GI24664469, Length=559, Percent_Identity=43.8282647584973, Blast_Score=463, Evalue=1e-130, Organism=Drosophila melanogaster, GI21357815, Length=504, Percent_Identity=42.0634920634921, Blast_Score=390, Evalue=1e-108,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_CHRVO (Q7NSG9)
Other databases:
- EMBL: AE016825 - RefSeq: NP_903127.1 - HSSP: P0A7E5 - ProteinModelPortal: Q7NSG9 - SMR: Q7NSG9 - GeneID: 2547824 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_3457 - NMPDR: fig|243365.1.peg.3457 - HOGENOM: HBG597806 - OMA: RVTMQKL - PhylomeDB: Q7NSG9 - ProtClustDB: PRK05380 - BioCyc: CVIO243365:CV_3457-MONOMER - BRENDA: 6.3.4.2 - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 60466; Mature: 60334
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 378-378 ACT_SITE 515-515 ACT_SITE 517-517
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYIFVTGGVVSSLGKGIAAASIAAILESRGLKVTMLKLDPYINVDPGTMSPFQHGEVF CCEEEEEECHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFIHAKMKKSNNFTTGQVYESVITKERRGDYLGGTVQVIPHITD EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCC EIKLKMGEGAADADVAIVEIGGTVGDIESLPFLEAIRQMRSNHGRKNTLYVHLSYVPYIA EEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCEEE TAGEIKTKPTQHSVKELREIGIQPDILLCRMDRELPEDEKRKIALFCNVEENAVIGCYDS ECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEECC DSIYKVPGMLHAQGIDDIIAEQLQLDLPQADLSAWDRIIDAIEKPDHAIKIAMVGKYVDL CCEEECCCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHH TESYKSLTEALKHAGIHTRTKVDIIYVDSEEIERDGAESLRDMDAILVPGGFGKRGVEGK HHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHCCHHHHHHCCCEEEECCCCCCCCCCCC IKAVKFARENDIPYLGICLGMQIALIEYARDVAGMAGANSTEFDLDTNFPVVALIDEWVN EEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEEEHHHHC HDGKIEKRDENSNMGGTMRLGGQQCDLVPGSLAARVYGSTEITERHRHRYEVNNYYIQRL CCCCEEECCCCCCCCCEEEECCCCCCCCCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHH EQAGLTISGRSAGHEKLVETIELTGHRWFFACQFHPEFTSTPRDGHPLFIAYVKAALAHQ HHCCCEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH ADKQAS HCCCCC >Mature Secondary Structure TKYIFVTGGVVSSLGKGIAAASIAAILESRGLKVTMLKLDPYINVDPGTMSPFQHGEVF CEEEEEECHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFIHAKMKKSNNFTTGQVYESVITKERRGDYLGGTVQVIPHITD EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCC EIKLKMGEGAADADVAIVEIGGTVGDIESLPFLEAIRQMRSNHGRKNTLYVHLSYVPYIA EEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCEEE TAGEIKTKPTQHSVKELREIGIQPDILLCRMDRELPEDEKRKIALFCNVEENAVIGCYDS ECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEECC DSIYKVPGMLHAQGIDDIIAEQLQLDLPQADLSAWDRIIDAIEKPDHAIKIAMVGKYVDL CCEEECCCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHH TESYKSLTEALKHAGIHTRTKVDIIYVDSEEIERDGAESLRDMDAILVPGGFGKRGVEGK HHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHCCHHHHHHCCCEEEECCCCCCCCCCCC IKAVKFARENDIPYLGICLGMQIALIEYARDVAGMAGANSTEFDLDTNFPVVALIDEWVN EEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEEEHHHHC HDGKIEKRDENSNMGGTMRLGGQQCDLVPGSLAARVYGSTEITERHRHRYEVNNYYIQRL CCCCEEECCCCCCCCCEEEECCCCCCCCCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHH EQAGLTISGRSAGHEKLVETIELTGHRWFFACQFHPEFTSTPRDGHPLFIAYVKAALAHQ HHCCCEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH ADKQAS HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14500782