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The map label for this gene is 34498909

Identifier: 34498909

GI number: 34498909

Start: 3750716

End: 3751558

Strand: Direct

Name: 34498909

Synonym: CV_3454

Alternate gene names: NA

Gene position: 3750716-3751558 (Clockwise)

Preceding gene: 34498908

Following gene: 34498912

Centisome position: 78.94

GC content: 67.62

Gene sequence:

>843_bases
ATGAGCCGCGCCAGCCTGCTGCAACAGGAAATGGGCCTGGGGCCGGCCTGGATGGCGCGTGGAGGGTGGTTCGAACAACA
CCCGGCGCAGCGGCTGCGCGAACAGACGCAGGCGGACGATGCGGAATCAGGCATGCCCGATCCCGCCCTGGAGCCGCGCT
CGCTCATCCCAGCCCCGCAGGAGACCGCCTCGGTCGCTCCGCCGGCTTCCAACTTCTCGCCCCCTGAGCAACCGCAGCCG
GCGGCGGAGCCGCTGCGCGCCGAAGTCGCAACAGAATCCCCGCTGTTGGACTGGCCGCAACTGCAGCGCAAGGTGTCCGA
CTGCCAGGACTGCCGCCTGTGCGAGACTCGCACCCAGACGGTGTTCGGCCGCGGCAATCCGCAAGCCCGCTGGATGCTGA
TAGGAGAAGCGCCGGGCGAGAACGAGGACCGGCAAGGCCTGCCTTTCGTCGGCCGCGCCGGCCAGTTGCTGGACAATATG
CTGTCGGCCGCCGGCCTGGACCGGGAGCAGGATGTCTATATCGCCAACGTGCTCAAATGCCGCCCGCCAGGCAACCGCAA
TCCCGCGCCGGACGAAATCGCCGCCTGCAACGGCTACCTGCTGCAGCAGATCCGGCATATCCAGCCGACCCTGATCGTCG
CGTTGGGCCGCTTCGCCGCCCAGACGCTGCTTGAGACCGAGAGCTCCATCGGCCGGCTGCGCGGCAAGGTGCACCGCTAT
CAAGGGCTACCGCTGGTGGTCAGCTACCATCCCGCCTACCTGCTGCGCAACCAACCCGACAAGGCCAAAGCCTGGCAGGA
TCTGCTGCTGGCCCGCAAGGTATTCCTTCAAGCCAGTTCCTGA

Upstream 100 bases:

>100_bases
GGCTCTACCAACGCTGCGGCTTCCATCAATGCGGGTTGCGCAAGAATTATTACCCGATCAGCGGCGGCCGCGAACACGCG
ATCCTGATGGAGGCGTCGCT

Downstream 100 bases:

>100_bases
AAACCGGCTTGATCGAAAACGACAAAGGCCAGTCATGAGACTGGCCTTTGTCGTTTCGCGCACTGCCGGCGGAACACCGC
CAGTCAAATAAAAAACCCTT

Product: DNA-directed DNA polymerase

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; DNA Polymerase Bacteriophage-Type; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; DNA Glycosylase; Uracil-DNA Glycosylase Family 4 Protein; Uracil DNA Glycosylase Superfamily Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein; Bacteriophage-Related DNA Polymerase; Phage DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; Phage SpO1 DNA Polymerase-Related Protein; Arginine Biosynthesis Bifunctional Protein ArgJ; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; Uracil DNA Glycosylase; Phage DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MSRASLLQQEMGLGPAWMARGGWFEQHPAQRLREQTQADDAESGMPDPALEPRSLIPAPQETASVAPPASNFSPPEQPQP
AAEPLRAEVATESPLLDWPQLQRKVSDCQDCRLCETRTQTVFGRGNPQARWMLIGEAPGENEDRQGLPFVGRAGQLLDNM
LSAAGLDREQDVYIANVLKCRPPGNRNPAPDEIAACNGYLLQQIRHIQPTLIVALGRFAAQTLLETESSIGRLRGKVHRY
QGLPLVVSYHPAYLLRNQPDKAKAWQDLLLARKVFLQASS

Sequences:

>Translated_280_residues
MSRASLLQQEMGLGPAWMARGGWFEQHPAQRLREQTQADDAESGMPDPALEPRSLIPAPQETASVAPPASNFSPPEQPQP
AAEPLRAEVATESPLLDWPQLQRKVSDCQDCRLCETRTQTVFGRGNPQARWMLIGEAPGENEDRQGLPFVGRAGQLLDNM
LSAAGLDREQDVYIANVLKCRPPGNRNPAPDEIAACNGYLLQQIRHIQPTLIVALGRFAAQTLLETESSIGRLRGKVHRY
QGLPLVVSYHPAYLLRNQPDKAKAWQDLLLARKVFLQASS
>Mature_279_residues
SRASLLQQEMGLGPAWMARGGWFEQHPAQRLREQTQADDAESGMPDPALEPRSLIPAPQETASVAPPASNFSPPEQPQPA
AEPLRAEVATESPLLDWPQLQRKVSDCQDCRLCETRTQTVFGRGNPQARWMLIGEAPGENEDRQGLPFVGRAGQLLDNML
SAAGLDREQDVYIANVLKCRPPGNRNPAPDEIAACNGYLLQQIRHIQPTLIVALGRFAAQTLLETESSIGRLRGKVHRYQ
GLPLVVSYHPAYLLRNQPDKAKAWQDLLLARKVFLQASS

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 30937; Mature: 30806

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRASLLQQEMGLGPAWMARGGWFEQHPAQRLREQTQADDAESGMPDPALEPRSLIPAPQ
CCHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCH
ETASVAPPASNFSPPEQPQPAAEPLRAEVATESPLLDWPQLQRKVSDCQDCRLCETRTQT
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VFGRGNPQARWMLIGEAPGENEDRQGLPFVGRAGQLLDNMLSAAGLDREQDVYIANVLKC
EECCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHEEE
RPPGNRNPAPDEIAACNGYLLQQIRHIQPTLIVALGRFAAQTLLETESSIGRLRGKVHRY
CCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGLPLVVSYHPAYLLRNQPDKAKAWQDLLLARKVFLQASS
CCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRASLLQQEMGLGPAWMARGGWFEQHPAQRLREQTQADDAESGMPDPALEPRSLIPAPQ
CHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCH
ETASVAPPASNFSPPEQPQPAAEPLRAEVATESPLLDWPQLQRKVSDCQDCRLCETRTQT
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VFGRGNPQARWMLIGEAPGENEDRQGLPFVGRAGQLLDNMLSAAGLDREQDVYIANVLKC
EECCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHEEE
RPPGNRNPAPDEIAACNGYLLQQIRHIQPTLIVALGRFAAQTLLETESSIGRLRGKVHRY
CCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGLPLVVSYHPAYLLRNQPDKAKAWQDLLLARKVFLQASS
CCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA