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The map label for this gene is coq7

Identifier: 34498826

GI number: 34498826

Start: 3667482

End: 3668102

Strand: Reverse

Name: coq7

Synonym: CV_3371

Alternate gene names: 34498826

Gene position: 3668102-3667482 (Counterclockwise)

Preceding gene: 34498829

Following gene: 34498825

Centisome position: 77.21

GC content: 69.4

Gene sequence:

>621_bases
ATGCTGGACAAGTTGATCACCGAACTGGACAAGGGGCTGCGCACGCTCTGCGCGCCGGCGCACAGCGGCCGCGCGCATCC
GGACCAGGATATCGCCGAGGCGGATCTTTCCGCGGCGGAGAAGAAGCATGCCTTGGGACTGATGCGGGTCAATCACTGCG
GCGAGGTGTGCGCGCAGGCGCTGTACCAGGGGCAGGCATTGACCGCGCGCGACGCGTCGGCGCGCGAGGCGCTGCGCCAG
GCGGCGCAGGAAGAGGTGGAGCACCTGGCCTGGACCGAGCGCCGCATCCGCGAGCTGGGCGGCAGGCCCAGCCTGCTCAA
TCCGCTGTGGTACACCGGCTCGCTGGCGCTGGGCGTGGCGGCCGGCGTGCTGGGCGACAAATGGAATCTGGGCTTCCTGC
AGGAAACCGAGCGCCAGGTCGGCGCCCATCTGGACAGCCATCTGAGCGCCTTGCCGCCGGATGACGCCCGAAGCCGCGCC
ATCGTCCGCCAGATGCGCGACGACGAGTTGCAGCACGCCGAAATGGCGCATGAGCTGGGCGCGGCGGAATTGCCCGCGCC
CGTGAAGGCGGCGATGAAGCTGTCGGCCAAGGTGATGACCGGCAGCAGCTACCGCGTGTAA

Upstream 100 bases:

>100_bases
GATGAACGGGTTTAACCGGCCGATTATATCAGCAGCTGCCGGCGCTGTGCCCGCAAGGTATAATCGCCGGTTTGACGACG
CTCGCTAGGAAGACCGCCCG

Downstream 100 bases:

>100_bases
TGGCGTCCGCCACCCGATCGCGCTCCTCCCAGCCGGCCTTGCGCCGGCTTTTTGTTTGTCCTGCCTCAAACTTGGCTCGG
ATTCGCCATGCCGTCTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: 5-demethoxyubiquinone hydroxylase; DMQ hydroxylase

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLDKLITELDKGLRTLCAPAHSGRAHPDQDIAEADLSAAEKKHALGLMRVNHCGEVCAQALYQGQALTARDASAREALRQ
AAQEEVEHLAWTERRIRELGGRPSLLNPLWYTGSLALGVAAGVLGDKWNLGFLQETERQVGAHLDSHLSALPPDDARSRA
IVRQMRDDELQHAEMAHELGAAELPAPVKAAMKLSAKVMTGSSYRV

Sequences:

>Translated_206_residues
MLDKLITELDKGLRTLCAPAHSGRAHPDQDIAEADLSAAEKKHALGLMRVNHCGEVCAQALYQGQALTARDASAREALRQ
AAQEEVEHLAWTERRIRELGGRPSLLNPLWYTGSLALGVAAGVLGDKWNLGFLQETERQVGAHLDSHLSALPPDDARSRA
IVRQMRDDELQHAEMAHELGAAELPAPVKAAMKLSAKVMTGSSYRV
>Mature_206_residues
MLDKLITELDKGLRTLCAPAHSGRAHPDQDIAEADLSAAEKKHALGLMRVNHCGEVCAQALYQGQALTARDASAREALRQ
AAQEEVEHLAWTERRIRELGGRPSLLNPLWYTGSLALGVAAGVLGDKWNLGFLQETERQVGAHLDSHLSALPPDDARSRA
IVRQMRDDELQHAEMAHELGAAELPAPVKAAMKLSAKVMTGSSYRV

Specific function: Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol

COG id: COG2941

COG function: function code H; Ubiquinone biosynthesis protein COQ7

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COQ7 family

Homologues:

Organism=Caenorhabditis elegans, GI17552756, Length=153, Percent_Identity=28.1045751633987, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COQ7_CHRVO (Q7NSP9)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_903041.1
- ProteinModelPortal:   Q7NSP9
- GeneID:   2549830
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_3371
- NMPDR:   fig|243365.1.peg.3371
- HOGENOM:   HBG289195
- OMA:   YQGQALT
- PhylomeDB:   Q7NSP9
- ProtClustDB:   CLSK866016
- BioCyc:   CVIO243365:CV_3371-MONOMER
- HAMAP:   MF_01658
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR011566
- Gene3D:   G3DSA:1.20.1260.10
- PANTHER:   PTHR11237

Pfam domain/function: PF03232 COQ7; SSF47240 Ferritin/RR_like

EC number: 1.14.13.-

Molecular weight: Translated: 22396; Mature: 22396

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKLITELDKGLRTLCAPAHSGRAHPDQDIAEADLSAAEKKHALGLMRVNHCGEVCAQA
CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYQGQALTARDASAREALRQAAQEEVEHLAWTERRIRELGGRPSLLNPLWYTGSLALGVA
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AGVLGDKWNLGFLQETERQVGAHLDSHLSALPPDDARSRAIVRQMRDDELQHAEMAHELG
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
AAELPAPVKAAMKLSAKVMTGSSYRV
CCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLDKLITELDKGLRTLCAPAHSGRAHPDQDIAEADLSAAEKKHALGLMRVNHCGEVCAQA
CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYQGQALTARDASAREALRQAAQEEVEHLAWTERRIRELGGRPSLLNPLWYTGSLALGVA
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AGVLGDKWNLGFLQETERQVGAHLDSHLSALPPDDARSRAIVRQMRDDELQHAEMAHELG
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
AAELPAPVKAAMKLSAKVMTGSSYRV
CCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14500782