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The map label for this gene is yibP [C]

Identifier: 34498808

GI number: 34498808

Start: 3648021

End: 3649412

Strand: Direct

Name: yibP [C]

Synonym: CV_3353

Alternate gene names: 34498808

Gene position: 3648021-3649412 (Clockwise)

Preceding gene: 34498807

Following gene: 34498809

Centisome position: 76.78

GC content: 64.66

Gene sequence:

>1392_bases
ATGCTCCGGCGTGGCCGCCGTTATTGCCTCAAGCGAAAGAACACCAAGGGAATGAAACCTTACCTGCTGCTGGCCCTGCT
GGCCGGCGCCGCCCAGGCGGCCAATACCAACGCCTCCTCCACCAGCCTGTCCGTCGCCCCGCATCAGCAAGACCTGAAAA
ACGTGCGCAAGGAGATCGACACCCTGAAGAAGGACCTGGCGCAGAAGCAGACGGTCCAGAAGGAGGCGCAGTCCGCGATC
AAGGAGTCGGAGCAGGCCATCAGCCAGACCAAGCAGGCGCTGGCGACGCTGGAGCAGAAGCAAAACCGTTCCGAACAGCA
GCTGGCCGAACTGCGCGGCAAGATCGAGCAAACCCGCGCCAAGCTGGCCGGCACCCGCCAGCGCGTCGGCCAGATGCTGG
TGCGCCAGTACAAGAACGGCCAGCACGACGCGATGAAGCTGATGCTGAACGCGGACGACCCCAACCAGAGCGCCCGCGAC
CTCACCTACTACCAGCACATCGCCCGCGCCGAGCAGCAGCTGGTGCAACAACTGGTCGTCCAGCAGAAACAGCTGGAAAC
GCTATCGGCCCAGTTGGAGCAGGAGCTGGCCAGATTGAACAATCTGTCCGATCGCAAGTCGCAGGAAAAAAGCGACCTGG
AAAAGGACAAGACCCAGCAGGTGCAGCAGCTGAACAAAGTAGCCGGCGAGATCAAGCAGGGCCAGAGCAAGCTGACGCAG
CTGCAGGAGGACGAGAAGCATCTGGCCAATGTGATCGCCCAGATCAACCGCGAGATCCAGCGCCGCCGCGCCGAGGCCGC
GCGCAAGGCCGCCGAGGCGCGCAAGGCCAAGCTGGCCGCCGCCCGGGAAGCCGCGCGCAAGGAAAACGAGCGTCGCCGCA
AGCTGGCCGAGCAAGCCAAGAAACAGGGCAAGCCGGTGCCTGAAGAGGCGAAGAAGCCGGTGATCGTCAAGGAAGAGCCG
GCGCACAAAGTGGACGAAGTCGCGGACGACAGCGCGTCCGGCCGCGCCTTCGCCAGCCTGCAGGGCAAGATGAAGATGCC
GGTGGCCGGCCAGATCGGCGGCGCCTACGGCAAAGCGCGGCGCGAAGGCACCACCTGGAAGGGCGTGTTCATCCGCGCCG
CCTCCGGCCAGCCGGTGCGCAGCGTCGCCGACGGCACCGTGGTGTATGCCGACGAGTTGCGCGGATTCGGCAAGGCGGTG
ATCATAGACCACGGCGGCAACTATATGACGGTGTACACCAACCTGTCCGCCATCGCCAAATCGTCCGGCAGCGGCGTCAA
GGCAGGGGAAACACTCGGCAACACCGGAGCACTGGACAACGGCGAATCCGGACTGTACTTTGAAATCCGGCACCTGGGCC
GCACCCTCAACCCGCAAGCCTGGACGCGCTAA

Upstream 100 bases:

>100_bases
CTCGCCGTCGCTGCTGGCGATGATGGGCCTGGAACAACCGGCGGAGATGACCGGTCAATCGCTGATCGACTTCCAATAAT
CGCCTCACGGAGCGGCGGCC

Downstream 100 bases:

>100_bases
GGTCCGGGACACGGAGAATCAGCAAAGCATGAGCAGCCAAAAAATGAAGAAAATCGCATGGTTGGTGGCAGGCGCCATGG
CCGGTGGCGTACTGACCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MLRRGRRYCLKRKNTKGMKPYLLLALLAGAAQAANTNASSTSLSVAPHQQDLKNVRKEIDTLKKDLAQKQTVQKEAQSAI
KESEQAISQTKQALATLEQKQNRSEQQLAELRGKIEQTRAKLAGTRQRVGQMLVRQYKNGQHDAMKLMLNADDPNQSARD
LTYYQHIARAEQQLVQQLVVQQKQLETLSAQLEQELARLNNLSDRKSQEKSDLEKDKTQQVQQLNKVAGEIKQGQSKLTQ
LQEDEKHLANVIAQINREIQRRRAEAARKAAEARKAKLAAAREAARKENERRRKLAEQAKKQGKPVPEEAKKPVIVKEEP
AHKVDEVADDSASGRAFASLQGKMKMPVAGQIGGAYGKARREGTTWKGVFIRAASGQPVRSVADGTVVYADELRGFGKAV
IIDHGGNYMTVYTNLSAIAKSSGSGVKAGETLGNTGALDNGESGLYFEIRHLGRTLNPQAWTR

Sequences:

>Translated_463_residues
MLRRGRRYCLKRKNTKGMKPYLLLALLAGAAQAANTNASSTSLSVAPHQQDLKNVRKEIDTLKKDLAQKQTVQKEAQSAI
KESEQAISQTKQALATLEQKQNRSEQQLAELRGKIEQTRAKLAGTRQRVGQMLVRQYKNGQHDAMKLMLNADDPNQSARD
LTYYQHIARAEQQLVQQLVVQQKQLETLSAQLEQELARLNNLSDRKSQEKSDLEKDKTQQVQQLNKVAGEIKQGQSKLTQ
LQEDEKHLANVIAQINREIQRRRAEAARKAAEARKAKLAAAREAARKENERRRKLAEQAKKQGKPVPEEAKKPVIVKEEP
AHKVDEVADDSASGRAFASLQGKMKMPVAGQIGGAYGKARREGTTWKGVFIRAASGQPVRSVADGTVVYADELRGFGKAV
IIDHGGNYMTVYTNLSAIAKSSGSGVKAGETLGNTGALDNGESGLYFEIRHLGRTLNPQAWTR
>Mature_463_residues
MLRRGRRYCLKRKNTKGMKPYLLLALLAGAAQAANTNASSTSLSVAPHQQDLKNVRKEIDTLKKDLAQKQTVQKEAQSAI
KESEQAISQTKQALATLEQKQNRSEQQLAELRGKIEQTRAKLAGTRQRVGQMLVRQYKNGQHDAMKLMLNADDPNQSARD
LTYYQHIARAEQQLVQQLVVQQKQLETLSAQLEQELARLNNLSDRKSQEKSDLEKDKTQQVQQLNKVAGEIKQGQSKLTQ
LQEDEKHLANVIAQINREIQRRRAEAARKAAEARKAKLAAAREAARKENERRRKLAEQAKKQGKPVPEEAKKPVIVKEEP
AHKVDEVADDSASGRAFASLQGKMKMPVAGQIGGAYGKARREGTTWKGVFIRAASGQPVRSVADGTVVYADELRGFGKAV
IIDHGGNYMTVYTNLSAIAKSSGSGVKAGETLGNTGALDNGESGLYFEIRHLGRTLNPQAWTR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=412, Percent_Identity=26.2135922330097, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1789099, Length=116, Percent_Identity=33.6206896551724, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87082174, Length=118, Percent_Identity=31.3559322033898, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 51297; Mature: 51297

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRGRRYCLKRKNTKGMKPYLLLALLAGAAQAANTNASSTSLSVAPHQQDLKNVRKEID
CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHH
TLKKDLAQKQTVQKEAQSAIKESEQAISQTKQALATLEQKQNRSEQQLAELRGKIEQTRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KLAGTRQRVGQMLVRQYKNGQHDAMKLMLNADDPNQSARDLTYYQHIARAEQQLVQQLVV
HHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QQKQLETLSAQLEQELARLNNLSDRKSQEKSDLEKDKTQQVQQLNKVAGEIKQGQSKLTQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQEDEKHLANVIAQINREIQRRRAEAARKAAEARKAKLAAAREAARKENERRRKLAEQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQGKPVPEEAKKPVIVKEEPAHKVDEVADDSASGRAFASLQGKMKMPVAGQIGGAYGKAR
HCCCCCCHHHCCCEEECCCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHH
REGTTWKGVFIRAASGQPVRSVADGTVVYADELRGFGKAVIIDHGGNYMTVYTNLSAIAK
CCCCCCCEEEEEECCCCCHHHHCCCCEEEHHHHCCCCCEEEEECCCCEEEEEECHHHHHH
SSGSGVKAGETLGNTGALDNGESGLYFEIRHLGRTLNPQAWTR
CCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLRRGRRYCLKRKNTKGMKPYLLLALLAGAAQAANTNASSTSLSVAPHQQDLKNVRKEID
CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHH
TLKKDLAQKQTVQKEAQSAIKESEQAISQTKQALATLEQKQNRSEQQLAELRGKIEQTRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KLAGTRQRVGQMLVRQYKNGQHDAMKLMLNADDPNQSARDLTYYQHIARAEQQLVQQLVV
HHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QQKQLETLSAQLEQELARLNNLSDRKSQEKSDLEKDKTQQVQQLNKVAGEIKQGQSKLTQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQEDEKHLANVIAQINREIQRRRAEAARKAAEARKAKLAAAREAARKENERRRKLAEQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQGKPVPEEAKKPVIVKEEPAHKVDEVADDSASGRAFASLQGKMKMPVAGQIGGAYGKAR
HCCCCCCHHHCCCEEECCCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHH
REGTTWKGVFIRAASGQPVRSVADGTVVYADELRGFGKAVIIDHGGNYMTVYTNLSAIAK
CCCCCCCEEEEEECCCCCHHHHCCCCEEEHHHHCCCCCEEEEECCCCEEEEEECHHHHHH
SSGSGVKAGETLGNTGALDNGESGLYFEIRHLGRTLNPQAWTR
CCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]