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The map label for this gene is prc [H]

Identifier: 34498809

GI number: 34498809

Start: 3649456

End: 3650877

Strand: Direct

Name: prc [H]

Synonym: CV_3354

Alternate gene names: 34498809

Gene position: 3649456-3650877 (Clockwise)

Preceding gene: 34498808

Following gene: 34498810

Centisome position: 76.81

GC content: 66.95

Gene sequence:

>1422_bases
ATGAAGAAAATCGCATGGTTGGTGGCAGGCGCCATGGCCGGTGGCGTACTGACCCTCAGCATGCAGGCGCTGGCCGACAA
GGAGGCCTCGCCGCTGCCGCTGAACGAGTTGCGCACCTTCGCCGAGGTGTTCAGCCTGATCAAGCAGAGCTATGTCGAGC
CGGTGACGGACAAGAAGCTGATAGACGAAGCCATCAAGGGCATGTTGACCGGCCTGGACCCGCACTCCGACTACATGGAC
CCCGAGGAATTCAAGGAACTGCGCGAAGGCACGCAGGGCGAGTTCGGCGGCCTGGGCATAGAGATCGGCGCCGAGGACGG
CCTGGTCAAGGTGGTGTCCCCTATCGAGGACACCCCGGCGCAGAAGGCCGGCATCAAGAGCGGCGACCTGATCATCAAGA
TCGACGACACTCCGGTGCGCGGCCTGTCGCTGAACGACGCGGTGAAAAAGATGCGCGGCAAGCCGGGCAGCAAGGTCACG
CTGACCATCGCCCGCAAGAACGAGGCCAAGCCGCTGGTGTTCACGCTGGCCCGCGCGGTGATCAAGACCAAGAGCGTCAA
GTACCGGATGCTGGAGTCGGGCTACGGCTACGTGCGCATCGCCCAGTTCCAGGAACACACCGCCGAGGACCTGGCCGCCG
GTCTGCAGAAGCTGTATCAGGAAAACAAGCAGCCGCTGAAAGGCCTGGTGCTGGACCTGCGCGATGACCCGGGCGGCCTG
CTGAACGGCGCCGTCGGCGTCGCCGCCGCCTTCCTGCCCAAGGACAAGCTGGTGGTCTACACCGAGGGCCGCACGCCGGA
CGCCAAGATGCGCCTGACCGCCACGCTGCAGAATTACGCGCGCCAGAACGGCAGCGATCCGCTGGCCAAGCTGCCGGTGG
CGGTGCGCAGCGTGCCGCTGGCGGTGCTGGTCAACGGCGGTTCGGCCTCGGCGTCGGAAATCGTCGCCGGCGCGCTGCAG
GACCACAAGCGCGCCGTGCTGGTGGGCACGCAAACCTTCGGCAAGGGCTCCGTGCAGTCCATCCTGCCGCTGGGCAGCCA
GGGCGGCATCAAGCTGACCACCGCCCGCTACTTCACGCCTAGCGGCCGCTCGATCCAGGCCAAGGGCATCACGCCGGACG
TGGTGGCCGAGGACGCGACGCTGACCGCCGCCGACCAGGCGTTGCGCGTGCGCGAGGCGGATCTGGAAAACCATCTGGCC
AATCCCAACGGCGACGACAAGCCGGCCAAGACGGCCAAACCCGCCGCCAAGCCTGCGCAGCCGCCCGCGCCGGCGCCCGT
TCCGGAGGGCAAGGACAAGGAGCCGGCCGCGCCGGACGCGCAAGGCGGACAGCGGATGCCGAACCCGAAGAGCGACTACC
AGCTGTCCCAGGCGCTGAACGTGCTCAAGGTGCAGCAGATCCTGCAGAAAAACGAGAACTGA

Upstream 100 bases:

>100_bases
TACTTTGAAATCCGGCACCTGGGCCGCACCCTCAACCCGCAAGCCTGGACGCGCTAAGGTCCGGGACACGGAGAATCAGC
AAAGCATGAGCAGCCAAAAA

Downstream 100 bases:

>100_bases
TCCCCCCGGTTCCCGACACGATGCCGCCCGGCCCCGCCGGGCGGCATTTTTCATGCAGGCGGGCTTACTTTCCGAAACAC
AATGCCGCGGCAATCCTGAT

Product: carboxy-terminal processing protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MKKIAWLVAGAMAGGVLTLSMQALADKEASPLPLNELRTFAEVFSLIKQSYVEPVTDKKLIDEAIKGMLTGLDPHSDYMD
PEEFKELREGTQGEFGGLGIEIGAEDGLVKVVSPIEDTPAQKAGIKSGDLIIKIDDTPVRGLSLNDAVKKMRGKPGSKVT
LTIARKNEAKPLVFTLARAVIKTKSVKYRMLESGYGYVRIAQFQEHTAEDLAAGLQKLYQENKQPLKGLVLDLRDDPGGL
LNGAVGVAAAFLPKDKLVVYTEGRTPDAKMRLTATLQNYARQNGSDPLAKLPVAVRSVPLAVLVNGGSASASEIVAGALQ
DHKRAVLVGTQTFGKGSVQSILPLGSQGGIKLTTARYFTPSGRSIQAKGITPDVVAEDATLTAADQALRVREADLENHLA
NPNGDDKPAKTAKPAAKPAQPPAPAPVPEGKDKEPAAPDAQGGQRMPNPKSDYQLSQALNVLKVQQILQKNEN

Sequences:

>Translated_473_residues
MKKIAWLVAGAMAGGVLTLSMQALADKEASPLPLNELRTFAEVFSLIKQSYVEPVTDKKLIDEAIKGMLTGLDPHSDYMD
PEEFKELREGTQGEFGGLGIEIGAEDGLVKVVSPIEDTPAQKAGIKSGDLIIKIDDTPVRGLSLNDAVKKMRGKPGSKVT
LTIARKNEAKPLVFTLARAVIKTKSVKYRMLESGYGYVRIAQFQEHTAEDLAAGLQKLYQENKQPLKGLVLDLRDDPGGL
LNGAVGVAAAFLPKDKLVVYTEGRTPDAKMRLTATLQNYARQNGSDPLAKLPVAVRSVPLAVLVNGGSASASEIVAGALQ
DHKRAVLVGTQTFGKGSVQSILPLGSQGGIKLTTARYFTPSGRSIQAKGITPDVVAEDATLTAADQALRVREADLENHLA
NPNGDDKPAKTAKPAAKPAQPPAPAPVPEGKDKEPAAPDAQGGQRMPNPKSDYQLSQALNVLKVQQILQKNEN
>Mature_473_residues
MKKIAWLVAGAMAGGVLTLSMQALADKEASPLPLNELRTFAEVFSLIKQSYVEPVTDKKLIDEAIKGMLTGLDPHSDYMD
PEEFKELREGTQGEFGGLGIEIGAEDGLVKVVSPIEDTPAQKAGIKSGDLIIKIDDTPVRGLSLNDAVKKMRGKPGSKVT
LTIARKNEAKPLVFTLARAVIKTKSVKYRMLESGYGYVRIAQFQEHTAEDLAAGLQKLYQENKQPLKGLVLDLRDDPGGL
LNGAVGVAAAFLPKDKLVVYTEGRTPDAKMRLTATLQNYARQNGSDPLAKLPVAVRSVPLAVLVNGGSASASEIVAGALQ
DHKRAVLVGTQTFGKGSVQSILPLGSQGGIKLTTARYFTPSGRSIQAKGITPDVVAEDATLTAADQALRVREADLENHLA
NPNGDDKPAKTAKPAAKPAQPPAPAPVPEGKDKEPAAPDAQGGQRMPNPKSDYQLSQALNVLKVQQILQKNEN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=336, Percent_Identity=29.1666666666667, Blast_Score=122, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 50338; Mature: 50338

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAWLVAGAMAGGVLTLSMQALADKEASPLPLNELRTFAEVFSLIKQSYVEPVTDKKL
CCHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
IDEAIKGMLTGLDPHSDYMDPEEFKELREGTQGEFGGLGIEIGAEDGLVKVVSPIEDTPA
HHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCCCH
QKAGIKSGDLIIKIDDTPVRGLSLNDAVKKMRGKPGSKVTLTIARKNEAKPLVFTLARAV
HHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHH
IKTKSVKYRMLESGYGYVRIAQFQEHTAEDLAAGLQKLYQENKQPLKGLVLDLRDDPGGL
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCH
LNGAVGVAAAFLPKDKLVVYTEGRTPDAKMRLTATLQNYARQNGSDPLAKLPVAVRSVPL
HHHHHHHHHHHCCCCCEEEEECCCCCCCCEEHHHHHHHHHHHCCCCCHHHCCHHHHCCCE
AVLVNGGSASASEIVAGALQDHKRAVLVGTQTFGKGSVQSILPLGSQGGIKLTTARYFTP
EEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCCCCCEEEEEEEEECC
SGRSIQAKGITPDVVAEDATLTAADQALRVREADLENHLANPNGDDKPAKTAKPAAKPAQ
CCCEEEECCCCHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PPAPAPVPEGKDKEPAAPDAQGGQRMPNPKSDYQLSQALNVLKVQQILQKNEN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKIAWLVAGAMAGGVLTLSMQALADKEASPLPLNELRTFAEVFSLIKQSYVEPVTDKKL
CCHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
IDEAIKGMLTGLDPHSDYMDPEEFKELREGTQGEFGGLGIEIGAEDGLVKVVSPIEDTPA
HHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCCCH
QKAGIKSGDLIIKIDDTPVRGLSLNDAVKKMRGKPGSKVTLTIARKNEAKPLVFTLARAV
HHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHH
IKTKSVKYRMLESGYGYVRIAQFQEHTAEDLAAGLQKLYQENKQPLKGLVLDLRDDPGGL
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCH
LNGAVGVAAAFLPKDKLVVYTEGRTPDAKMRLTATLQNYARQNGSDPLAKLPVAVRSVPL
HHHHHHHHHHHCCCCCEEEEECCCCCCCCEEHHHHHHHHHHHCCCCCHHHCCHHHHCCCE
AVLVNGGSASASEIVAGALQDHKRAVLVGTQTFGKGSVQSILPLGSQGGIKLTTARYFTP
EEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCCCCCEEEEEEEEECC
SGRSIQAKGITPDVVAEDATLTAADQALRVREADLENHLANPNGDDKPAKTAKPAAKPAQ
CCCEEEECCCCHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PPAPAPVPEGKDKEPAAPDAQGGQRMPNPKSDYQLSQALNVLKVQQILQKNEN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]