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The map label for this gene is pcaC [H]

Identifier: 34498743

GI number: 34498743

Start: 3579930

End: 3580244

Strand: Reverse

Name: pcaC [H]

Synonym: CV_3288

Alternate gene names: 34498743

Gene position: 3580244-3579930 (Counterclockwise)

Preceding gene: 34498745

Following gene: 34498742

Centisome position: 75.36

GC content: 67.94

Gene sequence:

>315_bases
ATGTTTTCCCCATCCGAAGCTTTGCCGCGCCTGGCGCCCAAACTGGATCAACTGACCCGGGAGGCGCTGTTCGGCGACGT
CTGGCAGCGCGCCGCGCTGTCGCCGCGCGAGCGCAGCCTGATCACCATCGCCGCGCTGCTGGGGCAATCCCGCCCCCATG
CATTGGCCTTCCACCTGAGGCGCGGGCGGGACAACGGCCTCGCCGCCGATGAGCTGGCCGAGGTTGTGACCCACCTGGCT
TTCTACGTCGGCTGGCCGTCGGCCACCGCCGCGCTGGAGCAGCTGGATGCCGTTCTGGCCGATCCAACTTTATAA

Upstream 100 bases:

>100_bases
CTGAATTTTAGGATGATTTGTGAAAATATATTCGATTTTATGAATTATTGCCTGGGTTTACAGTGAGCGCATGCCTTCAA
CGCCACAAAGGAGCCGCTCC

Downstream 100 bases:

>100_bases
AGGAGCGCACCATGCCTTACGTTCGCATTTCCCTGCACAAGGGCAAGCCGCCGCAATACCTGCGCGCCTTGGCCGACAGC
ATCCACCAGGCGATGACGGA

Product: 4-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MFSPSEALPRLAPKLDQLTREALFGDVWQRAALSPRERSLITIAALLGQSRPHALAFHLRRGRDNGLAADELAEVVTHLA
FYVGWPSATAALEQLDAVLADPTL

Sequences:

>Translated_104_residues
MFSPSEALPRLAPKLDQLTREALFGDVWQRAALSPRERSLITIAALLGQSRPHALAFHLRRGRDNGLAADELAEVVTHLA
FYVGWPSATAALEQLDAVLADPTL
>Mature_104_residues
MFSPSEALPRLAPKLDQLTREALFGDVWQRAALSPRERSLITIAALLGQSRPHALAFHLRRGRDNGLAADELAEVVTHLA
FYVGWPSATAALEQLDAVLADPTL

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 11342; Mature: 11342

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSPSEALPRLAPKLDQLTREALFGDVWQRAALSPRERSLITIAALLGQSRPHALAFHLR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHH
RGRDNGLAADELAEVVTHLAFYVGWPSATAALEQLDAVLADPTL
HCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFSPSEALPRLAPKLDQLTREALFGDVWQRAALSPRERSLITIAALLGQSRPHALAFHLR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHH
RGRDNGLAADELAEVVTHLAFYVGWPSATAALEQLDAVLADPTL
HCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]