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The map label for this gene is yjcH [H]

Identifier: 34498735

GI number: 34498735

Start: 3570788

End: 3571315

Strand: Direct

Name: yjcH [H]

Synonym: CV_3280

Alternate gene names: 34498735

Gene position: 3570788-3571315 (Clockwise)

Preceding gene: 34498724

Following gene: 34498736

Centisome position: 75.16

GC content: 54.55

Gene sequence:

>528_bases
TTGTCAGGCTCGAACGTCGCACCAGAGGACAAGCGCATGGAAGACAGGAAATTTCGAGCAAACATTCCACCGCAAACCAT
TGTTTTTTGTACTGTTTACCAAACAACCATCGGTCTGACTAATTCACAGCATCAGAAAATACGATTAGCGTCCCTCCGGC
TTCCTCTTTTATTTTTTCAGCAGCGCCAAACGAGCGCAGCACCCCCAAAGGAGGATGTCATGAATGAGGAGACTCTGAAG
AAGATCCAGTCCAATCCGAAGTATCTGGAACTGGTCCACAAGAAAACCAGCCTCGGCTGGACGCTGGCCATCGTGATGTT
GGTCATTTACTACGGCTACATCCTGGTGCTGGCCTTCGCCCCGTCTCTGCTGGGCAAGCCGCTGTACCAGGGCGCGACCA
TGACCGTGGGCATCCCGGTCGGCGTGTGCATCATCCTGTCGGCCTTCGTGCTGACCGGCATCTACGTGCGCCGCGCCAAC
CAGGAATTCGACCCATTGACCCAGCAGATCGTCGAGGAGGCCAAGTGA

Upstream 100 bases:

>100_bases
CCATTGAACCGGCCATATGGCTGTTCCGACAGCGCTTGCTCAGGCAGCGCTTCGCGCGTCGCCGTCCTGTGCATCGCCAT
CATGCCGCGGCCATGCCGTT

Downstream 100 bases:

>100_bases
TGCAGCAAATCCGACTCAAACTCGCCGCCTGCTCGGCGGCGCTGCTGCCCGCGCTCGCCTGCGCGGCCGGCGCGATAGAA
GGCGACGTCAAGCAGCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSGSNVAPEDKRMEDRKFRANIPPQTIVFCTVYQTTIGLTNSQHQKIRLASLRLPLLFFQQRQTSAAPPKEDVMNEETLK
KIQSNPKYLELVHKKTSLGWTLAIVMLVIYYGYILVLAFAPSLLGKPLYQGATMTVGIPVGVCIILSAFVLTGIYVRRAN
QEFDPLTQQIVEEAK

Sequences:

>Translated_175_residues
MSGSNVAPEDKRMEDRKFRANIPPQTIVFCTVYQTTIGLTNSQHQKIRLASLRLPLLFFQQRQTSAAPPKEDVMNEETLK
KIQSNPKYLELVHKKTSLGWTLAIVMLVIYYGYILVLAFAPSLLGKPLYQGATMTVGIPVGVCIILSAFVLTGIYVRRAN
QEFDPLTQQIVEEAK
>Mature_174_residues
SGSNVAPEDKRMEDRKFRANIPPQTIVFCTVYQTTIGLTNSQHQKIRLASLRLPLLFFQQRQTSAAPPKEDVMNEETLKK
IQSNPKYLELVHKKTSLGWTLAIVMLVIYYGYILVLAFAPSLLGKPLYQGATMTVGIPVGVCIILSAFVLTGIYVRRANQ
EFDPLTQQIVEEAK

Specific function: Unknown

COG id: COG3162

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790504, Length=102, Percent_Identity=45.0980392156863, Blast_Score=100, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007436 [H]

Pfam domain/function: PF04341 DUF485 [H]

EC number: NA

Molecular weight: Translated: 19672; Mature: 19541

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSNVAPEDKRMEDRKFRANIPPQTIVFCTVYQTTIGLTNSQHQKIRLASLRLPLLFFQ
CCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
QRQTSAAPPKEDVMNEETLKKIQSNPKYLELVHKKTSLGWTLAIVMLVIYYGYILVLAFA
HHHCCCCCCHHHHCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
PSLLGKPLYQGATMTVGIPVGVCIILSAFVLTGIYVRRANQEFDPLTQQIVEEAK
HHHHCCHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SGSNVAPEDKRMEDRKFRANIPPQTIVFCTVYQTTIGLTNSQHQKIRLASLRLPLLFFQ
CCCCCCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
QRQTSAAPPKEDVMNEETLKKIQSNPKYLELVHKKTSLGWTLAIVMLVIYYGYILVLAFA
HHHCCCCCCHHHHCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
PSLLGKPLYQGATMTVGIPVGVCIILSAFVLTGIYVRRANQEFDPLTQQIVEEAK
HHHHCCHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]