| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is actP [H]
Identifier: 34498736
GI number: 34498736
Start: 3571315
End: 3572994
Strand: Direct
Name: actP [H]
Synonym: CV_3281
Alternate gene names: 34498736
Gene position: 3571315-3572994 (Clockwise)
Preceding gene: 34498735
Following gene: 34498737
Centisome position: 75.17
GC content: 65.0
Gene sequence:
>1680_bases ATGCAGCAAATCCGACTCAAACTCGCCGCCTGCTCGGCGGCGCTGCTGCCCGCGCTCGCCTGCGCGGCCGGCGCGATAGA AGGCGACGTCAAGCAGCAAGCCACCAACTGGCACGCCATCATCATGTTCTTCCTGTTCGTCGCCTTCACGCTGGGCATCA CCTACTGGGCGGCGCGCCGCACCAAGTCGGCCAGCGACTTCTACGCCGCGGGCGGCGGCATCACCGGCTTCCAGAACGGC CTGGCGATCGCCGGTGACTATATGTCCGCCGCGTCCTTCCTGGGGATTTCCGCGCTGGTGTTCGAAAAGGGCTACGACGG CCTGATCTACTCGATGGGCTTCCTGGTCGGCTGGCCCATCATCCTGTTCCTGGTGGCCGAACGGCTGCGCAACCTGGGCA AGTACACCTTCGCAGACGTCGCCTCCTACCGGCTCGGACAGACGCCGGTGCGCAGCTTCGCCGCGCTGTCCACGCTGGTG GTGGTGGCGATCTACCTGATCGCCCAGATGGTCGGCGCGGGCAAGCTGATCCAGCTCTTGTTCGGCATGAGCTACAGCTC CGCCGTGCTGATGGTCGGCGTGCTGATGGTGTGCTACGTGCTGTTCGGCGGCATGCTGGCCACCACCTGGGTGCAAATCA TCAAGGCGGTGCTGCTGCTGTCCGGCGCCACCTTCATGGCCATCATGGTGCTGTCCACCGTCGGTTTCAGCCCGGAAATG ATGTTCGAGAAAGCCGTGGCCGCGCACAGCAAGGGCGCCGCCATCATGGCGCCGGGCAAGGCGGACCCGATCGACTCCAT CTCGCTGGGCCTGGCGCTGATGTTCGGCACCGCCGGCCTGCCGCACATCCTGATGCGCTTCTTCACTGTCGCCGACGCCA AGGAAGCCCGCAAATCGGTGTTCTTCGCCACCGGTTTCATCGGCTACTTCTACATCCTGACCTTCATCATCGGCTTCGGC GCCATCATGCTGGTGCTGAACCAGCCGGGCATGATGGAAACCGTGGTCAAGAACGGCAAGTCGGTCACCCAGCTGATCGG CGGCAACAATATGGCCGCCATCCACCTGGCCGACGCCGTCGGCGGCGACATCTTCCTCGGCTTCATCTCCGCGGTGGCCT TCGCCACCATCCTGGCGGTGGTGGCGGGCCTGGCGCTGTCCGGCGCGTCCGCGGTGTCGCACGATCTGTACGCCAGCGTG ATCAAGCACGGCAAGGCCAACGAGGCCGACGAGATCCGCGTGTCCAAGATCACCACCGTGGTGCTGGGCGTGGTGGCCAT CGTGCTGGGCCTGGTGTTCGAGAAGCAGAACATCGCCTTCATGGTCGGCCTCGCCTTCTCCATCGCCGCCTCCGCCAACT TCCCGGTGCTGTTCCTGTCCATGTTTTGGAAGGGCCTGACCACGCGCGGCGCGGTGGTGGGCGGCCTGGTCGGCCTGCTG ACCGCGGTGGTGCTGATCGTGCTGGGACCGACGGTGTGGGTGGAAGTGATGAAGCACGAGCACGCCATCTTCCCGTACAA GAACCCGGCCATCTTCTCGATGACCCTGGCCTTCGTCGTCACCTGGCTGGTTTCGGTGCTGGACACCTCCAAGCAGGCCG CAGACGAGAAGGCCAAGTTCGAGGCCCAGTACGTGCGGGCGATGACCGGCATCGGCGCCAGTGGCGCCAGCAAGCACTAA
Upstream 100 bases:
>100_bases GCATCATCCTGTCGGCCTTCGTGCTGACCGGCATCTACGTGCGCCGCGCCAACCAGGAATTCGACCCATTGACCCAGCAG ATCGTCGAGGAGGCCAAGTG
Downstream 100 bases:
>100_bases ATGTCATCATCATTGACATGCCGCGCGCCGGATGACGCGCGGCGATAACACCGAAAAGACTCTGGAGAAACACGTATGTC GACGCTAGATTCCATCCTCA
Product: acetate permease
Products: NA
Alternate protein names: Acetate permease; Acetate transporter ActP [H]
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MQQIRLKLAACSAALLPALACAAGAIEGDVKQQATNWHAIIMFFLFVAFTLGITYWAARRTKSASDFYAAGGGITGFQNG LAIAGDYMSAASFLGISALVFEKGYDGLIYSMGFLVGWPIILFLVAERLRNLGKYTFADVASYRLGQTPVRSFAALSTLV VVAIYLIAQMVGAGKLIQLLFGMSYSSAVLMVGVLMVCYVLFGGMLATTWVQIIKAVLLLSGATFMAIMVLSTVGFSPEM MFEKAVAAHSKGAAIMAPGKADPIDSISLGLALMFGTAGLPHILMRFFTVADAKEARKSVFFATGFIGYFYILTFIIGFG AIMLVLNQPGMMETVVKNGKSVTQLIGGNNMAAIHLADAVGGDIFLGFISAVAFATILAVVAGLALSGASAVSHDLYASV IKHGKANEADEIRVSKITTVVLGVVAIVLGLVFEKQNIAFMVGLAFSIAASANFPVLFLSMFWKGLTTRGAVVGGLVGLL TAVVLIVLGPTVWVEVMKHEHAIFPYKNPAIFSMTLAFVVTWLVSVLDTSKQAADEKAKFEAQYVRAMTGIGASGASKH
Sequences:
>Translated_559_residues MQQIRLKLAACSAALLPALACAAGAIEGDVKQQATNWHAIIMFFLFVAFTLGITYWAARRTKSASDFYAAGGGITGFQNG LAIAGDYMSAASFLGISALVFEKGYDGLIYSMGFLVGWPIILFLVAERLRNLGKYTFADVASYRLGQTPVRSFAALSTLV VVAIYLIAQMVGAGKLIQLLFGMSYSSAVLMVGVLMVCYVLFGGMLATTWVQIIKAVLLLSGATFMAIMVLSTVGFSPEM MFEKAVAAHSKGAAIMAPGKADPIDSISLGLALMFGTAGLPHILMRFFTVADAKEARKSVFFATGFIGYFYILTFIIGFG AIMLVLNQPGMMETVVKNGKSVTQLIGGNNMAAIHLADAVGGDIFLGFISAVAFATILAVVAGLALSGASAVSHDLYASV IKHGKANEADEIRVSKITTVVLGVVAIVLGLVFEKQNIAFMVGLAFSIAASANFPVLFLSMFWKGLTTRGAVVGGLVGLL TAVVLIVLGPTVWVEVMKHEHAIFPYKNPAIFSMTLAFVVTWLVSVLDTSKQAADEKAKFEAQYVRAMTGIGASGASKH >Mature_559_residues MQQIRLKLAACSAALLPALACAAGAIEGDVKQQATNWHAIIMFFLFVAFTLGITYWAARRTKSASDFYAAGGGITGFQNG LAIAGDYMSAASFLGISALVFEKGYDGLIYSMGFLVGWPIILFLVAERLRNLGKYTFADVASYRLGQTPVRSFAALSTLV VVAIYLIAQMVGAGKLIQLLFGMSYSSAVLMVGVLMVCYVLFGGMLATTWVQIIKAVLLLSGATFMAIMVLSTVGFSPEM MFEKAVAAHSKGAAIMAPGKADPIDSISLGLALMFGTAGLPHILMRFFTVADAKEARKSVFFATGFIGYFYILTFIIGFG AIMLVLNQPGMMETVVKNGKSVTQLIGGNNMAAIHLADAVGGDIFLGFISAVAFATILAVVAGLALSGASAVSHDLYASV IKHGKANEADEIRVSKITTVVLGVVAIVLGLVFEKQNIAFMVGLAFSIAASANFPVLFLSMFWKGLTTRGAVVGGLVGLL TAVVLIVLGPTVWVEVMKHEHAIFPYKNPAIFSMTLAFVVTWLVSVLDTSKQAADEKAKFEAQYVRAMTGIGASGASKH
Specific function: Transports acetate [H]
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=536, Percent_Identity=22.9477611940299, Blast_Score=94, Evalue=3e-19, Organism=Escherichia coli, GI1790503, Length=549, Percent_Identity=69.2167577413479, Blast_Score=758, Evalue=0.0, Organism=Escherichia coli, GI1787251, Length=457, Percent_Identity=25.601750547046, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI87082237, Length=447, Percent_Identity=22.8187919463087, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014083 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 59085; Mature: 59085
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQIRLKLAACSAALLPALACAAGAIEGDVKQQATNWHAIIMFFLFVAFTLGITYWAARR CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH TKSASDFYAAGGGITGFQNGLAIAGDYMSAASFLGISALVFEKGYDGLIYSMGFLVGWPI CCCCCCHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ILFLVAERLRNLGKYTFADVASYRLGQTPVRSFAALSTLVVVAIYLIAQMVGAGKLIQLL HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH FGMSYSSAVLMVGVLMVCYVLFGGMLATTWVQIIKAVLLLSGATFMAIMVLSTVGFSPEM HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH MFEKAVAAHSKGAAIMAPGKADPIDSISLGLALMFGTAGLPHILMRFFTVADAKEARKSV HHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FFATGFIGYFYILTFIIGFGAIMLVLNQPGMMETVVKNGKSVTQLIGGNNMAAIHLADAV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHCCCCEEEEEEHHHC GGDIFLGFISAVAFATILAVVAGLALSGASAVSHDLYASVIKHGKANEADEIRVSKITTV CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VLGVVAIVLGLVFEKQNIAFMVGLAFSIAASANFPVLFLSMFWKGLTTRGAVVGGLVGLL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH TAVVLIVLGPTVWVEVMKHEHAIFPYKNPAIFSMTLAFVVTWLVSVLDTSKQAADEKAKF HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH EAQYVRAMTGIGASGASKH HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQQIRLKLAACSAALLPALACAAGAIEGDVKQQATNWHAIIMFFLFVAFTLGITYWAARR CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH TKSASDFYAAGGGITGFQNGLAIAGDYMSAASFLGISALVFEKGYDGLIYSMGFLVGWPI CCCCCCHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ILFLVAERLRNLGKYTFADVASYRLGQTPVRSFAALSTLVVVAIYLIAQMVGAGKLIQLL HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH FGMSYSSAVLMVGVLMVCYVLFGGMLATTWVQIIKAVLLLSGATFMAIMVLSTVGFSPEM HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH MFEKAVAAHSKGAAIMAPGKADPIDSISLGLALMFGTAGLPHILMRFFTVADAKEARKSV HHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FFATGFIGYFYILTFIIGFGAIMLVLNQPGMMETVVKNGKSVTQLIGGNNMAAIHLADAV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHCCCCEEEEEEHHHC GGDIFLGFISAVAFATILAVVAGLALSGASAVSHDLYASVIKHGKANEADEIRVSKITTV CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VLGVVAIVLGLVFEKQNIAFMVGLAFSIAASANFPVLFLSMFWKGLTTRGAVVGGLVGLL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH TAVVLIVLGPTVWVEVMKHEHAIFPYKNPAIFSMTLAFVVTWLVSVLDTSKQAADEKAKF HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH EAQYVRAMTGIGASGASKH HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA