| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498697
Identifier: 34498697
GI number: 34498697
Start: 3521907
End: 3522506
Strand: Direct
Name: 34498697
Synonym: CV_3242
Alternate gene names: NA
Gene position: 3521907-3522506 (Clockwise)
Preceding gene: 34498696
Following gene: 34498698
Centisome position: 74.13
GC content: 66.33
Gene sequence:
>600_bases ATGAAAACCACCCTACTCTGCCTCGCCCTGCTCGCCGCCGCGCCCGCCTTCGCCGATAGCCAAACGCTGGTCATGCTGCG CCACGGCGAAAAACCGGACGGCGGCTACGGCCAGCTCAGCTGCAAGGGGCTGAACCGCTCGCTGGCGCTGATCAAGACGC TGCCGGCCAAATTCGGCAAGGCCGACCAGATTTACGCGCCGTCCACCGCCAGCCTGAAGCGCGACCCGGCCGGCACCTTC AACTACATCCGCCCGCTGGCGACGATAGAACCCACCGCCATCGCCCTGGGCCTGCCGGTGAACACCGCGTTCGACATGCT GGCGATAGACGGCCTGCAGCAACAGCTGCTCAATCCGCTGCGCCACGGCAAGACGGTCTACATCGCCTGGGAGCACAAAC AGCTGCAGGCGCTGGCCGCCGACATCATGCGCCGCTACGGCGGCAAGGATGGCGCGGCCCAGGTGCCGGCCTGGAGCAAG AATGACTTCGACAGCCTGTACGTGATCGACATCGATTACGGCAAGGGCAAGCCCATCGCCCGCTTCCGGCATGACAAGCA GGACCTGAACGACCTGCCCGACGCCTGCCCCGGCGCGTGA
Upstream 100 bases:
>100_bases GCCGCCGCCGAGATGCCGGCCGCGCGAATTTGCGATTTCGCTTGCATCCGGCGCGGCGCTGGCGCGAAATGGGCGTTTTA CCGCCGACGGATTCGCCCGA
Downstream 100 bases:
>100_bases ACGGCCGGCCGGATGCCATGCTGCGGCCGTACGCGCAGGCTCTTGACTTCAAGTTAACTTTAACTTTCATCATGACGGCT CCTACCGCTACAAGAGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MKTTLLCLALLAAAPAFADSQTLVMLRHGEKPDGGYGQLSCKGLNRSLALIKTLPAKFGKADQIYAPSTASLKRDPAGTF NYIRPLATIEPTAIALGLPVNTAFDMLAIDGLQQQLLNPLRHGKTVYIAWEHKQLQALAADIMRRYGGKDGAAQVPAWSK NDFDSLYVIDIDYGKGKPIARFRHDKQDLNDLPDACPGA
Sequences:
>Translated_199_residues MKTTLLCLALLAAAPAFADSQTLVMLRHGEKPDGGYGQLSCKGLNRSLALIKTLPAKFGKADQIYAPSTASLKRDPAGTF NYIRPLATIEPTAIALGLPVNTAFDMLAIDGLQQQLLNPLRHGKTVYIAWEHKQLQALAADIMRRYGGKDGAAQVPAWSK NDFDSLYVIDIDYGKGKPIARFRHDKQDLNDLPDACPGA >Mature_199_residues MKTTLLCLALLAAAPAFADSQTLVMLRHGEKPDGGYGQLSCKGLNRSLALIKTLPAKFGKADQIYAPSTASLKRDPAGTF NYIRPLATIEPTAIALGLPVNTAFDMLAIDGLQQQLLNPLRHGKTVYIAWEHKQLQALAADIMRRYGGKDGAAQVPAWSK NDFDSLYVIDIDYGKGKPIARFRHDKQDLNDLPDACPGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21591; Mature: 21591
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTLLCLALLAAAPAFADSQTLVMLRHGEKPDGGYGQLSCKGLNRSLALIKTLPAKFGK CCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCC ADQIYAPSTASLKRDPAGTFNYIRPLATIEPTAIALGLPVNTAFDMLAIDGLQQQLLNPL CCCEECCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH RHGKTVYIAWEHKQLQALAADIMRRYGGKDGAAQVPAWSKNDFDSLYVIDIDYGKGKPIA HCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHH RFRHDKQDLNDLPDACPGA HHHCCHHHHHHCCCCCCCC >Mature Secondary Structure MKTTLLCLALLAAAPAFADSQTLVMLRHGEKPDGGYGQLSCKGLNRSLALIKTLPAKFGK CCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCC ADQIYAPSTASLKRDPAGTFNYIRPLATIEPTAIALGLPVNTAFDMLAIDGLQQQLLNPL CCCEECCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH RHGKTVYIAWEHKQLQALAADIMRRYGGKDGAAQVPAWSKNDFDSLYVIDIDYGKGKPIA HCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHH RFRHDKQDLNDLPDACPGA HHHCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA