| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34498618
Identifier: 34498618
GI number: 34498618
Start: 3446705
End: 3447325
Strand: Reverse
Name: 34498618
Synonym: CV_3163
Alternate gene names: NA
Gene position: 3447325-3446705 (Counterclockwise)
Preceding gene: 34498619
Following gene: 34498617
Centisome position: 72.56
GC content: 67.15
Gene sequence:
>621_bases GTGAGCGACGATGACTGGCCCGGCATCGCCTCTGTTATGATCCGGGCATGTTTGTTTGGAAGCTCATTCATGATCGACGA CATCACCAGCCCCCGCCTGCTCCTGCGCCACCTGGACGCGGATTTTCTCGAATCCTGCCTGCGCGGCGACATCGACGCCG CCGCGGCCCGGCTGGGCTGCCGCCCGGCCGCTGGCTGGATGGGGGAGACCGCGCTGATGGAGATGCGGCTGGCCGATATG GCTGCGGAGCCAGCCTATGCGCCGTGGTCGGTGCGGGCGCTATTGCGCCGCGACGATCTGGCCATGATCGGCCACATCAA TTTCCATACCCGGCCCGGCCATCCCTATCTGAACGGCTATGGCGACGTCGAGCTCGGCTATGCGGTCTATCCCGCATTCC GCCGCCAGGGCTATGCCCGCGAGGCGCTGTTGGCGATGGCCGGCTGGGCGGCGCGGCAGGGCGGCGTGCAGCGGCTGGTG TTGTCGATCGAGCCCGGCAACCTGCCGTCGCAGGCGCTGGCCGCCCAGCTTGGCTTCGCCAAGGTGGGCCAGGCGCGAGA TGACGACGGTTGCGAAGATGTGCTGACGGCCGATTGGCCATTGCCTGGAGCCTTTGTTTGA
Upstream 100 bases:
>100_bases AGCAGCCGGCCGCGCATGACACCCCCGACAGCGCGACGCTGGCGGCCAAGCAGCGCGCCTGGGTCGGCCGCTGGACGCGG GTGGTGCTGAAGTCCGGCCA
Downstream 100 bases:
>100_bases AGCAGTCCGCCGTGCCCCGGCTGATCCTGGCCGGACTTCCGCTGTCCTTCCTCTTGCTGCTGGCCGTCGCGCCGCTGTTC CGCCTGTTGGCGGAAGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSDDDWPGIASVMIRACLFGSSFMIDDITSPRLLLRHLDADFLESCLRGDIDAAAARLGCRPAAGWMGETALMEMRLADM AAEPAYAPWSVRALLRRDDLAMIGHINFHTRPGHPYLNGYGDVELGYAVYPAFRRQGYAREALLAMAGWAARQGGVQRLV LSIEPGNLPSQALAAQLGFAKVGQARDDDGCEDVLTADWPLPGAFV
Sequences:
>Translated_206_residues MSDDDWPGIASVMIRACLFGSSFMIDDITSPRLLLRHLDADFLESCLRGDIDAAAARLGCRPAAGWMGETALMEMRLADM AAEPAYAPWSVRALLRRDDLAMIGHINFHTRPGHPYLNGYGDVELGYAVYPAFRRQGYAREALLAMAGWAARQGGVQRLV LSIEPGNLPSQALAAQLGFAKVGQARDDDGCEDVLTADWPLPGAFV >Mature_205_residues SDDDWPGIASVMIRACLFGSSFMIDDITSPRLLLRHLDADFLESCLRGDIDAAAARLGCRPAAGWMGETALMEMRLADMA AEPAYAPWSVRALLRRDDLAMIGHINFHTRPGHPYLNGYGDVELGYAVYPAFRRQGYAREALLAMAGWAARQGGVQRLVL SIEPGNLPSQALAAQLGFAKVGQARDDDGCEDVLTADWPLPGAFV
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22382; Mature: 22251
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDDWPGIASVMIRACLFGSSFMIDDITSPRLLLRHLDADFLESCLRGDIDAAAARLGC CCCCCCCCHHHHHHHHHHHCCCCEECCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHCC RPAAGWMGETALMEMRLADMAAEPAYAPWSVRALLRRDDLAMIGHINFHTRPGHPYLNGY CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCC GDVELGYAVYPAFRRQGYAREALLAMAGWAARQGGVQRLVLSIEPGNLPSQALAAQLGFA CCEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHH KVGQARDDDGCEDVLTADWPLPGAFV HHCCCCCCCCCHHCEECCCCCCCCCC >Mature Secondary Structure SDDDWPGIASVMIRACLFGSSFMIDDITSPRLLLRHLDADFLESCLRGDIDAAAARLGC CCCCCCCHHHHHHHHHHHCCCCEECCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHCC RPAAGWMGETALMEMRLADMAAEPAYAPWSVRALLRRDDLAMIGHINFHTRPGHPYLNGY CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCC GDVELGYAVYPAFRRQGYAREALLAMAGWAARQGGVQRLVLSIEPGNLPSQALAAQLGFA CCEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHH KVGQARDDDGCEDVLTADWPLPGAFV HHCCCCCCCCCHHCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA