| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is cheB [H]
Identifier: 34498594
GI number: 34498594
Start: 3424350
End: 3425105
Strand: Reverse
Name: cheB [H]
Synonym: CV_3139
Alternate gene names: 34498594
Gene position: 3425105-3424350 (Counterclockwise)
Preceding gene: 34498595
Following gene: 34498593
Centisome position: 72.09
GC content: 65.61
Gene sequence:
>756_bases ATGCCTGAGCGGGCCGAAGCCGACGGCTGCGCGGGCGAACCCTGTCTGCAAGGTAAAAACATGGCCTTGACTTCGCGCGA GCGAGCGAACAAGACTCCGCTGGAAATCGTTCCCAGCCACAACGCGGACGTGATCCTGCCGCGCCAGCCGACCAAGACGC CGCTGGCCAGCCAGACCGTCATCGTCATCGGCTCGTCCACCGGCGGCACCGAGGCGCTGCGTACGCTGCTGACCACGCTG CCCGCCAATATGCCGCCGATACTGATCGCCCAGCACATGCCGGAAATGTTTACCCATTCGTTCGCCCAGCGGCTGGACTC GCTGTGCCGGCTGAGGGTGAAGGAGGCGGAGGATAACGAAAGGCTGCAGGCCGGGACCGTCTACATCGCGCCCGGCCATT CCCATTTATTGATCAAGAGCGCGCCGACGATAGGCTACAGCACCTCGCTGAACAATGGCCCGGCGGTCAACCGCCACCGA CCGTCGGTCGACGTGCTGTTCCGTTCCGCCGCCAATCTGGTCGGCAAGAACAGCATCGGCGTCATCCTGACCGGCATGGG CCGCGACGGCGCCAACGGCATGCTGGAGATGCGGCAGGCCGGTGCCTGGAACATCGCCCAGGACGAGGCGAGCTGCGTGG TGTTCGGCATGCCCAAGGAGGCGATCGCCATCGGCGCCACCCACGAGGTGCTGGGACTGCCCAGCATCGCCCAGAGGCTG GTCACGCTGGTTCACCAGCGTCAGCCGTCGGTGTAA
Upstream 100 bases:
>100_bases GGCCGCCTGCGACGCCTGGCTGGCGCGGATCGCGGCCGGCTTGCGTTGAGCGCCTGACCGAAAGCGGCGCTCCTGCTAAG CTATTTGAAACAACCCCGTC
Downstream 100 bases:
>100_bases CCATAATTAAGAAGCATTGGACTCCATGAAGTATCTTCCGATTCTGGTGGTCGAAGACGACGCGGATCTGCGCGAGGCCA TCGTCGACACGCTTTCCCTG
Product: protein-glutamate methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MPERAEADGCAGEPCLQGKNMALTSRERANKTPLEIVPSHNADVILPRQPTKTPLASQTVIVIGSSTGGTEALRTLLTTL PANMPPILIAQHMPEMFTHSFAQRLDSLCRLRVKEAEDNERLQAGTVYIAPGHSHLLIKSAPTIGYSTSLNNGPAVNRHR PSVDVLFRSAANLVGKNSIGVILTGMGRDGANGMLEMRQAGAWNIAQDEASCVVFGMPKEAIAIGATHEVLGLPSIAQRL VTLVHQRQPSV
Sequences:
>Translated_251_residues MPERAEADGCAGEPCLQGKNMALTSRERANKTPLEIVPSHNADVILPRQPTKTPLASQTVIVIGSSTGGTEALRTLLTTL PANMPPILIAQHMPEMFTHSFAQRLDSLCRLRVKEAEDNERLQAGTVYIAPGHSHLLIKSAPTIGYSTSLNNGPAVNRHR PSVDVLFRSAANLVGKNSIGVILTGMGRDGANGMLEMRQAGAWNIAQDEASCVVFGMPKEAIAIGATHEVLGLPSIAQRL VTLVHQRQPSV >Mature_250_residues PERAEADGCAGEPCLQGKNMALTSRERANKTPLEIVPSHNADVILPRQPTKTPLASQTVIVIGSSTGGTEALRTLLTTLP ANMPPILIAQHMPEMFTHSFAQRLDSLCRLRVKEAEDNERLQAGTVYIAPGHSHLLIKSAPTIGYSTSLNNGPAVNRHRP SVDVLFRSAANLVGKNSIGVILTGMGRDGANGMLEMRQAGAWNIAQDEASCVVFGMPKEAIAIGATHEVLGLPSIAQRLV TLVHQRQPSV
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=194, Percent_Identity=56.701030927835, Blast_Score=225, Evalue=2e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 26817; Mature: 26686
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPERAEADGCAGEPCLQGKNMALTSRERANKTPLEIVPSHNADVILPRQPTKTPLASQTV CCCCCCCCCCCCCCCCCCCCEEEECHHHCCCCCEEEECCCCCCEEECCCCCCCCCCCCEE IVIGSSTGGTEALRTLLTTLPANMPPILIAQHMPEMFTHSFAQRLDSLCRLRVKEAEDNE EEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RLQAGTVYIAPGHSHLLIKSAPTIGYSTSLNNGPAVNRHRPSVDVLFRSAANLVGKNSIG CEEECEEEEECCCCEEEEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCE VILTGMGRDGANGMLEMRQAGAWNIAQDEASCVVFGMPKEAIAIGATHEVLGLPSIAQRL EEEEECCCCCCCCHHHHHHCCCCCEECCCCCEEEEECCHHHEEECCCHHHHCCHHHHHHH VTLVHQRQPSV HHHHHHCCCCC >Mature Secondary Structure PERAEADGCAGEPCLQGKNMALTSRERANKTPLEIVPSHNADVILPRQPTKTPLASQTV CCCCCCCCCCCCCCCCCCCEEEECHHHCCCCCEEEECCCCCCEEECCCCCCCCCCCCEE IVIGSSTGGTEALRTLLTTLPANMPPILIAQHMPEMFTHSFAQRLDSLCRLRVKEAEDNE EEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RLQAGTVYIAPGHSHLLIKSAPTIGYSTSLNNGPAVNRHRPSVDVLFRSAANLVGKNSIG CEEECEEEEECCCCEEEEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCE VILTGMGRDGANGMLEMRQAGAWNIAQDEASCVVFGMPKEAIAIGATHEVLGLPSIAQRL EEEEECCCCCCCCHHHHHHCCCCCEECCCCCEEEEECCHHHEEECCCHHHHCCHHHHHHH VTLVHQRQPSV HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA