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The map label for this gene is yebC [C]

Identifier: 34498578

GI number: 34498578

Start: 3410496

End: 3411221

Strand: Reverse

Name: yebC [C]

Synonym: CV_3123

Alternate gene names: 34498578

Gene position: 3411221-3410496 (Counterclockwise)

Preceding gene: 34498579

Following gene: 34498577

Centisome position: 71.8

GC content: 63.5

Gene sequence:

>726_bases
ATGGCAGGTCACAGCAAATGGGCTAACATCCAGCACCGCAAAGGTCGCCAGGATGCCAAACGTGGCAAGATCTTCACCCG
CCTGATCAAGGAAATCACCGTCGCGGCCAAGATGGGCGGAGGCGACGCCAACATGAACCCGCGCCTGCGCCTGGCCGTGG
ACAAGGCCAAGGCCGAGTCCATGCCCAAGGACAATATCGAGAACGCGATCAAGCGCGGCACCGGCCAGCTGGACGGCGTC
GACTACGTCGAATGCCGTTACGAAGGCTACGGCATCGCCGGCGCGGCGGTGATGGTGGATTGCCTGACCGACAACAAGAC
CCGCACCGTGGCCGACGTGCGCCACGCCTTCTCCAAGTACGGCGGCAACATGGGCACCGACGGCTGCGTGGCCTTCCAGT
TCAAGCATTGCGGCTACCTGGTGTTCGCGCCGGGCGTGGACGAGGACGCGCTGATGGAAGCGGCGCTGGAAGCCGGCGCC
GAGGACGTGGTCAGCAATGACGATGGTTCCATCGAGGTCATCACCGGCCCCTACGAATTCTCCGACGTCAAGGACGCGCT
GGAAGCCAAGGGCTTCAAGTCCGAGATGGGCGAAGTGACCATGCGCGCCGAGAACGAAACCGAACTGTCCGGCGACGACG
CCGTCCGCATGCAGAAGCTGCTGGACGCGCTGGAAGACCTGGACGACGTTCAGGACGTCTACACTTCGGCCGTGATCGGC
GAGTAA

Upstream 100 bases:

>100_bases
CCCGGCCCGTCTCGTAAAGCCGGCCGGCTTTCTGCTAGAATACCGCGAATTTTGATTGACGCTCCGGCGCGCCGGGGCCA
GACAACGCACAGAGGCAAAT

Downstream 100 bases:

>100_bases
GCGCTTTCCGCCAGTTTCGAAAACCCGGCTCGGCCGGGTTTTTTCATGCCCGCGCCGCTTGGGCCGCGCGCCGGCCCGGT
GTAAACTGGCGTTTTGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MAGHSKWANIQHRKGRQDAKRGKIFTRLIKEITVAAKMGGGDANMNPRLRLAVDKAKAESMPKDNIENAIKRGTGQLDGV
DYVECRYEGYGIAGAAVMVDCLTDNKTRTVADVRHAFSKYGGNMGTDGCVAFQFKHCGYLVFAPGVDEDALMEAALEAGA
EDVVSNDDGSIEVITGPYEFSDVKDALEAKGFKSEMGEVTMRAENETELSGDDAVRMQKLLDALEDLDDVQDVYTSAVIG
E

Sequences:

>Translated_241_residues
MAGHSKWANIQHRKGRQDAKRGKIFTRLIKEITVAAKMGGGDANMNPRLRLAVDKAKAESMPKDNIENAIKRGTGQLDGV
DYVECRYEGYGIAGAAVMVDCLTDNKTRTVADVRHAFSKYGGNMGTDGCVAFQFKHCGYLVFAPGVDEDALMEAALEAGA
EDVVSNDDGSIEVITGPYEFSDVKDALEAKGFKSEMGEVTMRAENETELSGDDAVRMQKLLDALEDLDDVQDVYTSAVIG
E
>Mature_240_residues
AGHSKWANIQHRKGRQDAKRGKIFTRLIKEITVAAKMGGGDANMNPRLRLAVDKAKAESMPKDNIENAIKRGTGQLDGVD
YVECRYEGYGIAGAAVMVDCLTDNKTRTVADVRHAFSKYGGNMGTDGCVAFQFKHCGYLVFAPGVDEDALMEAALEAGAE
DVVSNDDGSIEVITGPYEFSDVKDALEAKGFKSEMGEVTMRAENETELSGDDAVRMQKLLDALEDLDDVQDVYTSAVIGE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=243, Percent_Identity=28.8065843621399, Blast_Score=106, Evalue=2e-23,
Organism=Escherichia coli, GI1788171, Length=241, Percent_Identity=54.7717842323651, Blast_Score=265, Evalue=2e-72,
Organism=Escherichia coli, GI1788294, Length=232, Percent_Identity=39.6551724137931, Blast_Score=150, Evalue=9e-38,
Organism=Caenorhabditis elegans, GI17556100, Length=241, Percent_Identity=25.3112033195021, Blast_Score=76, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=32.5757575757576, Blast_Score=127, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24583305, Length=245, Percent_Identity=26.530612244898, Blast_Score=84, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26114; Mature: 25982

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIQHRKGRQDAKRGKIFTRLIKEITVAAKMGGGDANMNPRLRLAVDKAKAES
CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHC
MPKDNIENAIKRGTGQLDGVDYVECRYEGYGIAGAAVMVDCLTDNKTRTVADVRHAFSKY
CCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHEEHHCCCCHHHHHHHHHHHHHH
GGNMGTDGCVAFQFKHCGYLVFAPGVDEDALMEAALEAGAEDVVSNDDGSIEVITGPYEF
CCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHCCHHHHHCCCCCCEEEEECCCCH
SDVKDALEAKGFKSEMGEVTMRAENETELSGDDAVRMQKLLDALEDLDDVQDVYTSAVIG
HHHHHHHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
E
C
>Mature Secondary Structure 
AGHSKWANIQHRKGRQDAKRGKIFTRLIKEITVAAKMGGGDANMNPRLRLAVDKAKAES
CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHC
MPKDNIENAIKRGTGQLDGVDYVECRYEGYGIAGAAVMVDCLTDNKTRTVADVRHAFSKY
CCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHEEHHCCCCHHHHHHHHHHHHHH
GGNMGTDGCVAFQFKHCGYLVFAPGVDEDALMEAALEAGAEDVVSNDDGSIEVITGPYEF
CCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHCCHHHHHCCCCCCEEEEECCCCH
SDVKDALEAKGFKSEMGEVTMRAENETELSGDDAVRMQKLLDALEDLDDVQDVYTSAVIG
HHHHHHHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA