| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498557
Identifier: 34498557
GI number: 34498557
Start: 3389563
End: 3391182
Strand: Direct
Name: 34498557
Synonym: CV_3102
Alternate gene names: NA
Gene position: 3389563-3391182 (Clockwise)
Preceding gene: 34498556
Following gene: 34498560
Centisome position: 71.34
GC content: 65.37
Gene sequence:
>1620_bases ATGGCTGAAGAAACCTTCGACATCGCCATCGTCGGCGGCGGCGTATCCGGCGTCTACTGCGCCTGGCGACTGAAACAGAC CTATCCCGGCAAGAAGATCGCCGTGTTCGAAGCCAGCAACCACATCGGAGGACGGCTGCTGTCGGTGCGGCCGCCCGACA TTTTCGACATGGTGGCGGAGCTGGGCGGCATGCGCATCCTGCCGGCGGTGCAGCCGCTGGTCACCCAGTTGATTCACGAG CTGAACAAGGAACTGCCGGACGACGAACAGATCACGCTGTACGACTTCCCGGTGGACGAGCCGCAGAACATCGCCTTCCT GCGCGGCGTCTACCTGCGCCTGGCGGACTTCACCCAGAACCCGGACCTGGTGCCCTACCAGCTCAACTTCATCGACCACG GCCAGTCGGCCGGCGCGGTGATCGTCAATGCGATCGAGCAGATCGTGCCGGGCATCACCAATCCCGCCCTCACCGAAGAA CAACGCCGCGAAATGGCGCAAAGCGCTGAATTCGGCGGCGTGCCGCTGTACAAGCAGGGCTTCTGGAACGTGCTGCTGCG GGTGATCACCGGCGAAGCCTACCAATACGCGGAGGACGTCGGCGGCTACGATTCCACGCTGTGCAACTGGAACGCCGCCG ACGCCATCCCCTGGTATCTGTCCGATTTCGGCGTCGACCCGAAATACAAGGGCTTCTGCAAGGGCTTCCAGCAGGTGCCG CTGTCGCTGGCCCAGCTGTTTGAGCAAGCCGGCGGCGAGGTGAGGCTGGCATCCCACGTCTCCGACATCGCCTTGAAAGG CGACGGCTTTTCCTTCCTGGTCAACGGCAGCGCGGCGGCAGCCAAGACGCTGATCCTGGCGATGCCGCGCCGCTCGCTGG AATTGCTGACCGCCACCAGCCCCGCGCTGCAAGATGCCAAGACCCAGGCGCTGATCTCGACGGTCACCCCGCGGCCGCTG TTCAAGCTGTTCACCACCTACGACAGTCCCTGGTGGCGCAACACCGGCTGCACCGTCTCAGGAACCGACGGCAAGCCGGT CTACGCGGCGGTGGAGGCAGGCCGTTCGGTCACCGACCTGCCGGTGCGGCAAACCTATTACTGGCCGAAGGACAACGGCA AACCGGCCACCTCAGGCCACGCGATGCTGCTGGCCAGCTACGACGACGGGGACAACACCGGCTTCTGGGATGGGCTGCGG GCCAAGCGCCGTCAACCCAGAGCGCGCGGCCTGGACGTGGCGCCGCTGGCCGATCCCTTCATCGGCGTCGACGACGACGT GATGCGCAACGAGCTGGAATGGCACCAGTACAAGGCCCCGCGGATGATGACAGAGGAAGTCACTCGCCAGCTGACCGTGA TGCACAGCCTGAGCTACACGCCCAAGGTGCGCAACGCCGCCTACCGCGACTGGGGCGACGACCCGTTCGGCGGCGGCTGG AACAGCTGGAACATAGGGGTGAAGAGCTGGGAGGTGAAGCACGCCGTGGTGCAGCCGACCGATCTGCCGCTGTATATCTG CGGCGAGGCCTATTCCGATGCCCAGGGCTGGGTGGAGGGCGCGCTGCAGACCGCCGGCTACCTGCTGGGCAAACTGGGCG TTTCCGCCTTCCCGCGCTAG
Upstream 100 bases:
>100_bases TCGGCGCGGACGCGCAGCAACGCAATGACGGCGCCGGCCTGCCGGGCAACGTGCCGGTGATCTTCTGAGCCCCATCCACT CCCGAGGAGGAGACCGCATC
Downstream 100 bases:
>100_bases CTTGCCCTCGCGCCCCCGACACGGACCGCCCGGCTAGGCCGCGGCGGTCCGTTTTCATGGCCTATCCTGCTCCACCAGCC CCAACCGCGGCACCACGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 539; Mature: 538
Protein sequence:
>539_residues MAEETFDIAIVGGGVSGVYCAWRLKQTYPGKKIAVFEASNHIGGRLLSVRPPDIFDMVAELGGMRILPAVQPLVTQLIHE LNKELPDDEQITLYDFPVDEPQNIAFLRGVYLRLADFTQNPDLVPYQLNFIDHGQSAGAVIVNAIEQIVPGITNPALTEE QRREMAQSAEFGGVPLYKQGFWNVLLRVITGEAYQYAEDVGGYDSTLCNWNAADAIPWYLSDFGVDPKYKGFCKGFQQVP LSLAQLFEQAGGEVRLASHVSDIALKGDGFSFLVNGSAAAAKTLILAMPRRSLELLTATSPALQDAKTQALISTVTPRPL FKLFTTYDSPWWRNTGCTVSGTDGKPVYAAVEAGRSVTDLPVRQTYYWPKDNGKPATSGHAMLLASYDDGDNTGFWDGLR AKRRQPRARGLDVAPLADPFIGVDDDVMRNELEWHQYKAPRMMTEEVTRQLTVMHSLSYTPKVRNAAYRDWGDDPFGGGW NSWNIGVKSWEVKHAVVQPTDLPLYICGEAYSDAQGWVEGALQTAGYLLGKLGVSAFPR
Sequences:
>Translated_539_residues MAEETFDIAIVGGGVSGVYCAWRLKQTYPGKKIAVFEASNHIGGRLLSVRPPDIFDMVAELGGMRILPAVQPLVTQLIHE LNKELPDDEQITLYDFPVDEPQNIAFLRGVYLRLADFTQNPDLVPYQLNFIDHGQSAGAVIVNAIEQIVPGITNPALTEE QRREMAQSAEFGGVPLYKQGFWNVLLRVITGEAYQYAEDVGGYDSTLCNWNAADAIPWYLSDFGVDPKYKGFCKGFQQVP LSLAQLFEQAGGEVRLASHVSDIALKGDGFSFLVNGSAAAAKTLILAMPRRSLELLTATSPALQDAKTQALISTVTPRPL FKLFTTYDSPWWRNTGCTVSGTDGKPVYAAVEAGRSVTDLPVRQTYYWPKDNGKPATSGHAMLLASYDDGDNTGFWDGLR AKRRQPRARGLDVAPLADPFIGVDDDVMRNELEWHQYKAPRMMTEEVTRQLTVMHSLSYTPKVRNAAYRDWGDDPFGGGW NSWNIGVKSWEVKHAVVQPTDLPLYICGEAYSDAQGWVEGALQTAGYLLGKLGVSAFPR >Mature_538_residues AEETFDIAIVGGGVSGVYCAWRLKQTYPGKKIAVFEASNHIGGRLLSVRPPDIFDMVAELGGMRILPAVQPLVTQLIHEL NKELPDDEQITLYDFPVDEPQNIAFLRGVYLRLADFTQNPDLVPYQLNFIDHGQSAGAVIVNAIEQIVPGITNPALTEEQ RREMAQSAEFGGVPLYKQGFWNVLLRVITGEAYQYAEDVGGYDSTLCNWNAADAIPWYLSDFGVDPKYKGFCKGFQQVPL SLAQLFEQAGGEVRLASHVSDIALKGDGFSFLVNGSAAAAKTLILAMPRRSLELLTATSPALQDAKTQALISTVTPRPLF KLFTTYDSPWWRNTGCTVSGTDGKPVYAAVEAGRSVTDLPVRQTYYWPKDNGKPATSGHAMLLASYDDGDNTGFWDGLRA KRRQPRARGLDVAPLADPFIGVDDDVMRNELEWHQYKAPRMMTEEVTRQLTVMHSLSYTPKVRNAAYRDWGDDPFGGGWN SWNIGVKSWEVKHAVVQPTDLPLYICGEAYSDAQGWVEGALQTAGYLLGKLGVSAFPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59441; Mature: 59310
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEETFDIAIVGGGVSGVYCAWRLKQTYPGKKIAVFEASNHIGGRLLSVRPPDIFDMVAE CCCCEEEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHH LGGMRILPAVQPLVTQLIHELNKELPDDEQITLYDFPVDEPQNIAFLRGVYLRLADFTQN HCCEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC PDLVPYQLNFIDHGQSAGAVIVNAIEQIVPGITNPALTEEQRREMAQSAEFGGVPLYKQG CCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHH FWNVLLRVITGEAYQYAEDVGGYDSTLCNWNAADAIPWYLSDFGVDPKYKGFCKGFQQVP HHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHH LSLAQLFEQAGGEVRLASHVSDIALKGDGFSFLVNGSAAAAKTLILAMPRRSLELLTATS HHHHHHHHHCCCCEEEECCCCCEEECCCCEEEEECCCHHHHHHHHEECCCCCEEEEECCC PALQDAKTQALISTVTPRPLFKLFTTYDSPWWRNTGCTVSGTDGKPVYAAVEAGRSVTDL HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEECCCCCEECC PVRQTYYWPKDNGKPATSGHAMLLASYDDGDNTGFWDGLRAKRRQPRARGLDVAPLADPF CCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCHHCCCCCCCCCCCC IGVDDDVMRNELEWHQYKAPRMMTEEVTRQLTVMHSLSYTPKVRNAAYRDWGDDPFGGGW CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCC NSWNIGVKSWEVKHAVVQPTDLPLYICGEAYSDAQGWVEGALQTAGYLLGKLGVSAFPR CCCCCCCEEEEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AEETFDIAIVGGGVSGVYCAWRLKQTYPGKKIAVFEASNHIGGRLLSVRPPDIFDMVAE CCCEEEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHH LGGMRILPAVQPLVTQLIHELNKELPDDEQITLYDFPVDEPQNIAFLRGVYLRLADFTQN HCCEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC PDLVPYQLNFIDHGQSAGAVIVNAIEQIVPGITNPALTEEQRREMAQSAEFGGVPLYKQG CCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHH FWNVLLRVITGEAYQYAEDVGGYDSTLCNWNAADAIPWYLSDFGVDPKYKGFCKGFQQVP HHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHH LSLAQLFEQAGGEVRLASHVSDIALKGDGFSFLVNGSAAAAKTLILAMPRRSLELLTATS HHHHHHHHHCCCCEEEECCCCCEEECCCCEEEEECCCHHHHHHHHEECCCCCEEEEECCC PALQDAKTQALISTVTPRPLFKLFTTYDSPWWRNTGCTVSGTDGKPVYAAVEAGRSVTDL HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEECCCCCEECC PVRQTYYWPKDNGKPATSGHAMLLASYDDGDNTGFWDGLRAKRRQPRARGLDVAPLADPF CCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCHHCCCCCCCCCCCC IGVDDDVMRNELEWHQYKAPRMMTEEVTRQLTVMHSLSYTPKVRNAAYRDWGDDPFGGGW CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCC NSWNIGVKSWEVKHAVVQPTDLPLYICGEAYSDAQGWVEGALQTAGYLLGKLGVSAFPR CCCCCCCEEEEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA