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The map label for this gene is yddH [H]

Identifier: 34498528

GI number: 34498528

Start: 3350865

End: 3351419

Strand: Reverse

Name: yddH [H]

Synonym: CV_3073

Alternate gene names: 34498528

Gene position: 3351419-3350865 (Counterclockwise)

Preceding gene: 34498529

Following gene: 34498526

Centisome position: 70.54

GC content: 65.23

Gene sequence:

>555_bases
ATGCTGGCGGATGTGGAACTGGCCAAATCCTATCGATTGTTGAACCATGGCCCGACGGTGCTGGTCAGCAGCGCGGCGGC
AGGCAGGCGCAACGTGATGGCCGCCGCCTGGGCGATGCCGCTGGATTTCGATCCGCCCAAGGTGCTGGTGGTGATCGACA
AGTCCACGTATACCCGGGAGCTGGTTGAGGCCAGCGGCGAGTTCGTGCTCAACATTCCCTGCCGCGCGCAGGCGGAGCAA
GTGGTGCGGGTGGGCAGCGAGAGCGGCCATGGTCGGGACAAGTTCGCGTCCAGCGGGCTCGCGCCTCTGCCGGCGCGGAA
AGTGGGCGCGCCGAGGGTGGCCGGCTGCATCGCCTATCTGGAGTGCAAGGTGGTTCTAGAGCCGCACAATCAGCGGCAAT
ATGATCTGTTCATCGGCGAAGTGGTCGCCGCCCAGGCTGATGACGCCTTGTTCAGCGATGGTCATTGGCATTTCGACGAC
GACCCGGCCAAGCGCAGCCTGCACTACATCGCCGGCGGCGCCTTCTTCGCCACCGGCGAGGCGTTCAGCGTCTGA

Upstream 100 bases:

>100_bases
GCCCGGGACCAGGGGCTGCAGCTTCGGCTGTGCCATCTGGGGTCCGCCGCGGGCTGACCTTGTTGTTAGAATGGCCGTCT
TTGGATTCACGGAGACGATC

Downstream 100 bases:

>100_bases
GCGTCGCCCCACAATCCTGCGCTGCGCCTTCTTGCCGCTTGGCGACGGTGCCGGCGCGTCTTCGCTCAGGCGCATCGCGA
GGTTGGATTGGCGATGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MLADVELAKSYRLLNHGPTVLVSSAAAGRRNVMAAAWAMPLDFDPPKVLVVIDKSTYTRELVEASGEFVLNIPCRAQAEQ
VVRVGSESGHGRDKFASSGLAPLPARKVGAPRVAGCIAYLECKVVLEPHNQRQYDLFIGEVVAAQADDALFSDGHWHFDD
DPAKRSLHYIAGGAFFATGEAFSV

Sequences:

>Translated_184_residues
MLADVELAKSYRLLNHGPTVLVSSAAAGRRNVMAAAWAMPLDFDPPKVLVVIDKSTYTRELVEASGEFVLNIPCRAQAEQ
VVRVGSESGHGRDKFASSGLAPLPARKVGAPRVAGCIAYLECKVVLEPHNQRQYDLFIGEVVAAQADDALFSDGHWHFDD
DPAKRSLHYIAGGAFFATGEAFSV
>Mature_184_residues
MLADVELAKSYRLLNHGPTVLVSSAAAGRRNVMAAAWAMPLDFDPPKVLVVIDKSTYTRELVEASGEFVLNIPCRAQAEQ
VVRVGSESGHGRDKFASSGLAPLPARKVGAPRVAGCIAYLECKVVLEPHNQRQYDLFIGEVVAAQADDALFSDGHWHFDD
DPAKRSLHYIAGGAFFATGEAFSV

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=179, Percent_Identity=44.6927374301676, Blast_Score=160, Evalue=5e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 19840; Mature: 19840

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLADVELAKSYRLLNHGPTVLVSSAAAGRRNVMAAAWAMPLDFDPPKVLVVIDKSTYTRE
CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEECCHHHHH
LVEASGEFVLNIPCRAQAEQVVRVGSESGHGRDKFASSGLAPLPARKVGAPRVAGCIAYL
HHHCCCCEEEECCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHEEEE
ECKVVLEPHNQRQYDLFIGEVVAAQADDALFSDGHWHFDDDPAKRSLHYIAGGAFFATGE
EEEEEECCCCCEEEEEEHHHHHHHCCCCCEECCCCCCCCCCHHHHEEEEEECCEEEECCC
AFSV
EECC
>Mature Secondary Structure
MLADVELAKSYRLLNHGPTVLVSSAAAGRRNVMAAAWAMPLDFDPPKVLVVIDKSTYTRE
CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEECCHHHHH
LVEASGEFVLNIPCRAQAEQVVRVGSESGHGRDKFASSGLAPLPARKVGAPRVAGCIAYL
HHHCCCCEEEECCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHEEEE
ECKVVLEPHNQRQYDLFIGEVVAAQADDALFSDGHWHFDDDPAKRSLHYIAGGAFFATGE
EEEEEECCCCCEEEEEEHHHHHHHCCCCCEECCCCCCCCCCHHHHEEEEEECCEEEECCC
AFSV
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]