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The map label for this gene is 34498526

Identifier: 34498526

GI number: 34498526

Start: 3348570

End: 3349226

Strand: Reverse

Name: 34498526

Synonym: CV_3071

Alternate gene names: NA

Gene position: 3349226-3348570 (Counterclockwise)

Preceding gene: 34498528

Following gene: 34498523

Centisome position: 70.49

GC content: 67.73

Gene sequence:

>657_bases
ATGTCGCGGCAGGTCAAGGTATGGGATGCGCCCACCCGTTTGTTTCACTGGACGCTGGTGATATTGTTCGGCGCGATGTG
GTTCTGCGCGGAGCAGGGCGGCGAATGGCTGCAATACCATATCTATTGCGGCGTGGCGCTGGCGTCGCTGCTGGTGTTCC
GCCTGGTCTGGGGCGTGATCGGCAGCCAGACCGCGCGCTTTTCCAGCTTTGTGCGCGGTCCGCGCGCCATTCTGCGTTAC
CTGAAGGGCGAGCTGCCGGAGCGCGAGGCGCCGGGCCACAACCCGCTGGGCGGCTGGATGGTGGTGGTCATGCTGCTGGC
GCTGGCCGCGCAGGTGCTGACCGGCCTATTCGCCGCCGACGTGGACAGCTACCTGTACGATGGCCCGCTGGCCAAGCACG
TGGGCAGCGGCTTGGCCGAGGCCGCCACCGGCGTGCACAAGCTGCTGTTCAACGGCCTGCTGGGCCTGGTGGGGCTGCAT
GTCGCCGCCATCGTCGCCTACCGGGTGGTGAAGAAGCAGAACCTGGTGGGGCCGATGCTGACCGGCTACAAGAAAATGGC
GGGCGAGCCGCCGCGGCTGCGTTTCGCCCACGGCGCGCTGGCCTTGGCGACGCTGCTGTTGTCGGCGGGCGGCCTGTATT
TCGCGCTGCTGCGCTGA

Upstream 100 bases:

>100_bases
CCTCCTGGCGCAGAATATCCTCATCCATGGCATGGGCGGGTTTGCCTGCCTGCCGCATTGCGGCAAAATGTCGAATGGAA
AATCAGGAAAGGAAGAATCG

Downstream 100 bases:

>100_bases
AGCGCTTCCGCGGAAAACGACAAAGCCGGCAATCGCCGGCTTTTTGCTTTCCACCGCGCCGGGCGCTTATTTTTCCGGGC
CGCGGAAGGCGTCGTGACAG

Product: hydrogenase cytochrome b-type subunit

Products: NA

Alternate protein names: Cytochrome; Nickel-Dependent Hydrogenase B-Type Cytochrome Subunit; Hydrogenase Cytochrome B-Type Subunit; B-Type Cytochrome; Cytochrome B/B6 Domain; Dihem Cytochrome C; Hydrogenase Cytochrome B-Type; Hydrogenase Cytochrome B-Type Subunit Protein; Nickel-Dependent Hydrogenase; Integral Membrane Protein; Cytochrome C Family Protein; Ni/Fe-Hydrogenase 1 B-Type Cytochrome Subunit

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSRQVKVWDAPTRLFHWTLVILFGAMWFCAEQGGEWLQYHIYCGVALASLLVFRLVWGVIGSQTARFSSFVRGPRAILRY
LKGELPEREAPGHNPLGGWMVVVMLLALAAQVLTGLFAADVDSYLYDGPLAKHVGSGLAEAATGVHKLLFNGLLGLVGLH
VAAIVAYRVVKKQNLVGPMLTGYKKMAGEPPRLRFAHGALALATLLLSAGGLYFALLR

Sequences:

>Translated_218_residues
MSRQVKVWDAPTRLFHWTLVILFGAMWFCAEQGGEWLQYHIYCGVALASLLVFRLVWGVIGSQTARFSSFVRGPRAILRY
LKGELPEREAPGHNPLGGWMVVVMLLALAAQVLTGLFAADVDSYLYDGPLAKHVGSGLAEAATGVHKLLFNGLLGLVGLH
VAAIVAYRVVKKQNLVGPMLTGYKKMAGEPPRLRFAHGALALATLLLSAGGLYFALLR
>Mature_217_residues
SRQVKVWDAPTRLFHWTLVILFGAMWFCAEQGGEWLQYHIYCGVALASLLVFRLVWGVIGSQTARFSSFVRGPRAILRYL
KGELPEREAPGHNPLGGWMVVVMLLALAAQVLTGLFAADVDSYLYDGPLAKHVGSGLAEAATGVHKLLFNGLLGLVGLHV
AAIVAYRVVKKQNLVGPMLTGYKKMAGEPPRLRFAHGALALATLLLSAGGLYFALLR

Specific function: Unknown

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23699; Mature: 23568

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQVKVWDAPTRLFHWTLVILFGAMWFCAEQGGEWLQYHIYCGVALASLLVFRLVWGVI
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GSQTARFSSFVRGPRAILRYLKGELPEREAPGHNPLGGWMVVVMLLALAAQVLTGLFAAD
CCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VDSYLYDGPLAKHVGSGLAEAATGVHKLLFNGLLGLVGLHVAAIVAYRVVKKQNLVGPML
HHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGYKKMAGEPPRLRFAHGALALATLLLSAGGLYFALLR
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure 
SRQVKVWDAPTRLFHWTLVILFGAMWFCAEQGGEWLQYHIYCGVALASLLVFRLVWGVI
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GSQTARFSSFVRGPRAILRYLKGELPEREAPGHNPLGGWMVVVMLLALAAQVLTGLFAAD
CCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VDSYLYDGPLAKHVGSGLAEAATGVHKLLFNGLLGLVGLHVAAIVAYRVVKKQNLVGPML
HHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGYKKMAGEPPRLRFAHGALALATLLLSAGGLYFALLR
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA