| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is aroA [H]
Identifier: 34498503
GI number: 34498503
Start: 3325593
End: 3326963
Strand: Direct
Name: aroA [H]
Synonym: CV_3048
Alternate gene names: 34498503
Gene position: 3325593-3326963 (Clockwise)
Preceding gene: 34498492
Following gene: 34498504
Centisome position: 70.0
GC content: 68.42
Gene sequence:
>1371_bases ATGATTGCCACCATCGCGCCATGGCGGTTACAGTGTCCGCTGCTTAGCATCCATCATCCGAACACAGAACGCGCCCGCCT CATGGAACAACTGCATCTCAATCCCTGCACCCGCCTCGCCGGCTCCATCAAGCTGCCCGGCTCCAAGAGCATCTCCAACC GCACGCTGCTGCTGGCCGCGTTGTCAGGCGGCAGCACGCTGGTGCGCGACCTGCTGGACTCCGACGACATCCGCCACATG CTGAGCGCGCTGAAGCTGCTGGGCGTGAAGATCGAGCAACAAGGAGACAGCCGGGACTTCCGCGTCCAGGGCTGCGGCGG CGTCTTCCCGGTGAAGAACGCCGAATTGTTTCTCGGCAACGCCGGCACCGCCTTCCGGCCGCTGACCGCGGCGCTGGCGC TGATGGGCGGCAGTTACCAACTATCCGGCGTGCCGCGCATGCACGAGCGCCCGATCGGCGACCTGGTGGACGCGCTGAAC GCCGCCGGCGCCCGCATCGAATACCTGGGCCAGCCCGGCTTCCCGCCGCTCGCCGTTTCCCCGGCGGACGTGCGCTGCGC CGCCCCCATCCAGGTGAAAGGCAATGTTTCCAGCCAGTTCCTCACCGCCCTCCTGATGGCGTTGCCGCTGACCGGCGGCC AGGCCGAGATCGAAGTGGTGGGCGAGCTGATCTCCAAACCCTATATCGAAATCACGCTGAACCTGATGGCCCGCTTCGGC GTGCGCGTCGAACGCGACGGCTGGCAGCGCTTCGTCATTCCCGGCGGCCAGCACTACATCTCGCCGGGCGAAGTCTACGT CGAAGGCGACGCCTCCAGCGCGTCCTATTTCCTGGCGGCCGGCGCGCTGGCCGGCGGACCGGTGCGGGTGGAGGGCGTCG GCGAGGCCAGCATCCAGGGCGACGTGCGTTTCGCGGAAGCGCTGGAGCGGATGGGCGCATCGGTGCGCCTCGGCGACAAC TGGATCGAGGCCCGCGCCGAAGGCAGGCTCAAGGCGATCGATCTGGACTGCAACCACATCCCGGACGCGGCGATGACGCT GGCGGTGGCCGCGCTGGCCGCCGACGGCACCACCACGCTGCGCAACATCGCCAGCTGGCGGGTGAAGGAAACCGACCGCC TGTCGGCGATGGCGGCCGAGCTGCGCAAGGTGGGCGCGACGGTGGAAGAAGGGCCGGACTACATCCGCGTCACCCCGCCG GCCGCGCTGACGCCGAACGCCGAGATCGACACCTACGACGACCACCGGATGGCGATGTGCTTCTCGCTGGTTTCGCTGCT GGGCGCGCCGGTCGTCATCAACGACCCGGGCTGCGTGGCCAAGACCTTCCCGGGCTACTTCCAGGCGCTGGCCGCGCTGC AGGCGCAATAA
Upstream 100 bases:
>100_bases GACCCGGCCGGATCCGCCGCGCGTCGCGGGAAGAACGGGCCGGTCAAACCGGGCATTGTAACCGAAGCGGGCTTCGCCGA GTGGGCGGAATGCGCGCCGC
Downstream 100 bases:
>100_bases TCGCAATATATTGATGATTTAATCGATAGACTCCACAATATATGCATCACAAAGGAGTCTAACGATGAGCGATCTGTTCC GGATGCGCCGCGATTTCATG
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS [H]
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MIATIAPWRLQCPLLSIHHPNTERARLMEQLHLNPCTRLAGSIKLPGSKSISNRTLLLAALSGGSTLVRDLLDSDDIRHM LSALKLLGVKIEQQGDSRDFRVQGCGGVFPVKNAELFLGNAGTAFRPLTAALALMGGSYQLSGVPRMHERPIGDLVDALN AAGARIEYLGQPGFPPLAVSPADVRCAAPIQVKGNVSSQFLTALLMALPLTGGQAEIEVVGELISKPYIEITLNLMARFG VRVERDGWQRFVIPGGQHYISPGEVYVEGDASSASYFLAAGALAGGPVRVEGVGEASIQGDVRFAEALERMGASVRLGDN WIEARAEGRLKAIDLDCNHIPDAAMTLAVAALAADGTTTLRNIASWRVKETDRLSAMAAELRKVGATVEEGPDYIRVTPP AALTPNAEIDTYDDHRMAMCFSLVSLLGAPVVINDPGCVAKTFPGYFQALAALQAQ
Sequences:
>Translated_456_residues MIATIAPWRLQCPLLSIHHPNTERARLMEQLHLNPCTRLAGSIKLPGSKSISNRTLLLAALSGGSTLVRDLLDSDDIRHM LSALKLLGVKIEQQGDSRDFRVQGCGGVFPVKNAELFLGNAGTAFRPLTAALALMGGSYQLSGVPRMHERPIGDLVDALN AAGARIEYLGQPGFPPLAVSPADVRCAAPIQVKGNVSSQFLTALLMALPLTGGQAEIEVVGELISKPYIEITLNLMARFG VRVERDGWQRFVIPGGQHYISPGEVYVEGDASSASYFLAAGALAGGPVRVEGVGEASIQGDVRFAEALERMGASVRLGDN WIEARAEGRLKAIDLDCNHIPDAAMTLAVAALAADGTTTLRNIASWRVKETDRLSAMAAELRKVGATVEEGPDYIRVTPP AALTPNAEIDTYDDHRMAMCFSLVSLLGAPVVINDPGCVAKTFPGYFQALAALQAQ >Mature_456_residues MIATIAPWRLQCPLLSIHHPNTERARLMEQLHLNPCTRLAGSIKLPGSKSISNRTLLLAALSGGSTLVRDLLDSDDIRHM LSALKLLGVKIEQQGDSRDFRVQGCGGVFPVKNAELFLGNAGTAFRPLTAALALMGGSYQLSGVPRMHERPIGDLVDALN AAGARIEYLGQPGFPPLAVSPADVRCAAPIQVKGNVSSQFLTALLMALPLTGGQAEIEVVGELISKPYIEITLNLMARFG VRVERDGWQRFVIPGGQHYISPGEVYVEGDASSASYFLAAGALAGGPVRVEGVGEASIQGDVRFAEALERMGASVRLGDN WIEARAEGRLKAIDLDCNHIPDAAMTLAVAALAADGTTTLRNIASWRVKETDRLSAMAAELRKVGATVEEGPDYIRVTPP AALTPNAEIDTYDDHRMAMCFSLVSLLGAPVVINDPGCVAKTFPGYFQALAALQAQ
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787137, Length=425, Percent_Identity=60.2352941176471, Blast_Score=476, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6320332, Length=447, Percent_Identity=38.4787472035794, Blast_Score=247, Evalue=4e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 [H]
Pfam domain/function: PF00275 EPSP_synthase [H]
EC number: =2.5.1.19 [H]
Molecular weight: Translated: 48538; Mature: 48538
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00104 EPSP_SYNTHASE_1 ; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIATIAPWRLQCPLLSIHHPNTERARLMEQLHLNPCTRLAGSIKLPGSKSISNRTLLLAA CCCCCCCCEEECCEEEEECCCHHHHHHHHHHCCCHHHHCCCCEECCCCCCCCCCEEEEEE LSGGSTLVRDLLDSDDIRHMLSALKLLGVKIEQQGDSRDFRVQGCGGVFPVKNAELFLGN ECCCHHHHHHHHCCHHHHHHHHHHHHHCEEEECCCCCCCEEEECCCCCCCCCCCEEEEEC AGTAFRPLTAALALMGGSYQLSGVPRMHERPIGDLVDALNAAGARIEYLGQPGFPPLAVS CCCCHHHHHHHHHHHCCCEEECCCCCHHCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCC PADVRCAAPIQVKGNVSSQFLTALLMALPLTGGQAEIEVVGELISKPYIEITLNLMARFG CCCCEEECCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHC VRVERDGWQRFVIPGGQHYISPGEVYVEGDASSASYFLAAGALAGGPVRVEGVGEASIQG CEEECCCCEEEEECCCCEECCCCEEEEECCCCCCEEEEEECCCCCCCEEEEECCCCCCCC DVRFAEALERMGASVRLGDNWIEARAEGRLKAIDLDCNHIPDAAMTLAVAALAADGTTTL CHHHHHHHHHCCCEEEECCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHH RNIASWRVKETDRLSAMAAELRKVGATVEEGPDYIRVTPPAALTPNAEIDTYDDHRMAMC HHHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHH FSLVSLLGAPVVINDPGCVAKTFPGYFQALAALQAQ HHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MIATIAPWRLQCPLLSIHHPNTERARLMEQLHLNPCTRLAGSIKLPGSKSISNRTLLLAA CCCCCCCCEEECCEEEEECCCHHHHHHHHHHCCCHHHHCCCCEECCCCCCCCCCEEEEEE LSGGSTLVRDLLDSDDIRHMLSALKLLGVKIEQQGDSRDFRVQGCGGVFPVKNAELFLGN ECCCHHHHHHHHCCHHHHHHHHHHHHHCEEEECCCCCCCEEEECCCCCCCCCCCEEEEEC AGTAFRPLTAALALMGGSYQLSGVPRMHERPIGDLVDALNAAGARIEYLGQPGFPPLAVS CCCCHHHHHHHHHHHCCCEEECCCCCHHCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCC PADVRCAAPIQVKGNVSSQFLTALLMALPLTGGQAEIEVVGELISKPYIEITLNLMARFG CCCCEEECCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHC VRVERDGWQRFVIPGGQHYISPGEVYVEGDASSASYFLAAGALAGGPVRVEGVGEASIQG CEEECCCCEEEEECCCCEECCCCEEEEECCCCCCEEEEEECCCCCCCEEEEECCCCCCCC DVRFAEALERMGASVRLGDNWIEARAEGRLKAIDLDCNHIPDAAMTLAVAALAADGTTTL CHHHHHHHHHCCCEEEECCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHH RNIASWRVKETDRLSAMAAELRKVGATVEEGPDYIRVTPPAALTPNAEIDTYDDHRMAMC HHHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHH FSLVSLLGAPVVINDPGCVAKTFPGYFQALAALQAQ HHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA