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The map label for this gene is lutB [H]

Identifier: 34498483

GI number: 34498483

Start: 3307439

End: 3308896

Strand: Reverse

Name: lutB [H]

Synonym: CV_3028

Alternate gene names: 34498483

Gene position: 3308896-3307439 (Counterclockwise)

Preceding gene: 34498484

Following gene: 34498482

Centisome position: 69.65

GC content: 66.32

Gene sequence:

>1458_bases
ATGAGCGAGAGCAAGATCACCGTCTACCCGTCCCGCGCCTTCAAGGACAACGCCAGGCTGGCGCTGAGCGACGGCAAGCT
GAGGCAAAGCCTGCGCGGCGCGATGGATTTCCTGATGGCCAAACGGCTGGCCTCGTTTCCGGACCCGGCGGAACTGGCGG
CCCTGCGCACGCTGGGCGAGGGCATACGCCAGCGCTGTCTGTCGCGGCTGCCGGAGTTGCTGGAGCAGCTGGAGGAGAAG
CTCACCGCCAACGGCGTCCAGGTGCATTGGGCGGAGACTGCCGAGGAAGCCAACCGCATCATCCATGGCATCGTCGCCGG
TAGACAGGGCAAGCTGATGGTCAAGGGCAAGTCCATGGTCAGCGAGGAGATCGAGCTCAACCACTATCTGGCGGAGCGGG
GCGTGGAGGCGGTGGAGAGCGATATGGGCGAGTACATCGTCCAGCTGGCAGGCGAGAAACCCACCCACATCATCATGCCG
GCCATCCACAAGACCAAGCAGGACATCGCCCGGCTGTTCCACGAGCAACTGCCGGACACGCCGTACACCGAGGACGTGGA
CGCGCTGATCCAGATCGGCCGCCGCGCGTTGCGGCAAAAGTATCTGGACGCCGACGTCGGCCTGTCCGGCGTCAACTTCG
CCGTCGCCGAAACCGGCACCCTGTGCCTGGTGGAGAACGAGGGCAACGGCCGCATGTGCACCACGGTGCCGGATGTGCAT
ATCGCCGTCACCGGCATCGAAAAGGTGGTGGAAAAGCTGGAAGACGTGGCGCCGCTGTACAGCCTGCTGACTCGTTCCGC
CATCGGCCAGCCCATCACCACCTATTTCAACATGATCAGCGGTCCGCGCAAGCCGGGCGAGAAGGACGGCCCGCGCGAGG
TGCACCTGGTGCTGCTGGACAACGGCCGCAGCCAGGCCTATGCCGACGAGCAGCTGCGCAAGACGCTGCAATGCATACGC
TGCGGCGCCTGCATGAACCACTGCCCGGTCTATACCCGCATCGGCGGCCACGCCTACGGCACCACTTATCCGGGGCCGAT
AGGCGAGATCATTTCGCCGCACCTGATGGGGCTGGAAAATACGAGCGATCTGCCGACCGCGTCCAGCTTGTGCGGCGCCT
GCGGCGAAGTGTGTCCGGTGCGGATTCCGATACCGGAGATGCTGATGCGGCTGCGCGAGGAGAGCCAGCGGCCGGCCGGC
GAGCGGGTGGCGCATCCGCTGCGCGGCCAGGGCGCGGCGGCCAGCGGCGCGGAGCGCCTGGCCTGGGCCGGATGGCGGCT
GGTCAACGCCTCGCCCAATCTGTACCGGATGTTCGGCTGGGCGGCCACCCGCTTGCGCAGGCACGCGCCCAAGAATCAAC
TGGGTTGGACGCAAAACCATCTGCCGCTGACGCCGGCGTCCAGGACGCTGCATGAGCTGGTCCGCGAACGCGAAGCTAGC
AAGGGGACATCCGCATGA

Upstream 100 bases:

>100_bases
AGCAGACGCTGGCCTACGGCGCGCACGGCCCGCGCGAGCTGCTGGTGCTGGCCGTGCTGCCGCTGCGCATCGCCATCCAC
GATGTGGAAGGAGGCGGGCG

Downstream 100 bases:

>100_bases
CGCCCGCCCACGCCGATTTTCTGCAGGACCTTCGCCGGACGATGCCGGCGGCGCGCATTTTCACCGACCCATTGTCCACA
CTGGCTTACGGCACCGACGC

Product: iron-sulphur protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MSESKITVYPSRAFKDNARLALSDGKLRQSLRGAMDFLMAKRLASFPDPAELAALRTLGEGIRQRCLSRLPELLEQLEEK
LTANGVQVHWAETAEEANRIIHGIVAGRQGKLMVKGKSMVSEEIELNHYLAERGVEAVESDMGEYIVQLAGEKPTHIIMP
AIHKTKQDIARLFHEQLPDTPYTEDVDALIQIGRRALRQKYLDADVGLSGVNFAVAETGTLCLVENEGNGRMCTTVPDVH
IAVTGIEKVVEKLEDVAPLYSLLTRSAIGQPITTYFNMISGPRKPGEKDGPREVHLVLLDNGRSQAYADEQLRKTLQCIR
CGACMNHCPVYTRIGGHAYGTTYPGPIGEIISPHLMGLENTSDLPTASSLCGACGEVCPVRIPIPEMLMRLREESQRPAG
ERVAHPLRGQGAAASGAERLAWAGWRLVNASPNLYRMFGWAATRLRRHAPKNQLGWTQNHLPLTPASRTLHELVREREAS
KGTSA

Sequences:

>Translated_485_residues
MSESKITVYPSRAFKDNARLALSDGKLRQSLRGAMDFLMAKRLASFPDPAELAALRTLGEGIRQRCLSRLPELLEQLEEK
LTANGVQVHWAETAEEANRIIHGIVAGRQGKLMVKGKSMVSEEIELNHYLAERGVEAVESDMGEYIVQLAGEKPTHIIMP
AIHKTKQDIARLFHEQLPDTPYTEDVDALIQIGRRALRQKYLDADVGLSGVNFAVAETGTLCLVENEGNGRMCTTVPDVH
IAVTGIEKVVEKLEDVAPLYSLLTRSAIGQPITTYFNMISGPRKPGEKDGPREVHLVLLDNGRSQAYADEQLRKTLQCIR
CGACMNHCPVYTRIGGHAYGTTYPGPIGEIISPHLMGLENTSDLPTASSLCGACGEVCPVRIPIPEMLMRLREESQRPAG
ERVAHPLRGQGAAASGAERLAWAGWRLVNASPNLYRMFGWAATRLRRHAPKNQLGWTQNHLPLTPASRTLHELVREREAS
KGTSA
>Mature_484_residues
SESKITVYPSRAFKDNARLALSDGKLRQSLRGAMDFLMAKRLASFPDPAELAALRTLGEGIRQRCLSRLPELLEQLEEKL
TANGVQVHWAETAEEANRIIHGIVAGRQGKLMVKGKSMVSEEIELNHYLAERGVEAVESDMGEYIVQLAGEKPTHIIMPA
IHKTKQDIARLFHEQLPDTPYTEDVDALIQIGRRALRQKYLDADVGLSGVNFAVAETGTLCLVENEGNGRMCTTVPDVHI
AVTGIEKVVEKLEDVAPLYSLLTRSAIGQPITTYFNMISGPRKPGEKDGPREVHLVLLDNGRSQAYADEQLRKTLQCIRC
GACMNHCPVYTRIGGHAYGTTYPGPIGEIISPHLMGLENTSDLPTASSLCGACGEVCPVRIPIPEMLMRLREESQRPAGE
RVAHPLRGQGAAASGAERLAWAGWRLVNASPNLYRMFGWAATRLRRHAPKNQLGWTQNHLPLTPASRTLHELVREREASK
GTSA

Specific function: Is essential for L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate. May also allow cells to utilize an alternative carbon source during biofi

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=428, Percent_Identity=42.2897196261682, Blast_Score=358, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR022825 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 53395; Mature: 53264

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESKITVYPSRAFKDNARLALSDGKLRQSLRGAMDFLMAKRLASFPDPAELAALRTLGE
CCCCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GIRQRCLSRLPELLEQLEEKLTANGVQVHWAETAEEANRIIHGIVAGRQGKLMVKGKSMV
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCEEECCHHHH
SEEIELNHYLAERGVEAVESDMGEYIVQLAGEKPTHIIMPAIHKTKQDIARLFHEQLPDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCC
PYTEDVDALIQIGRRALRQKYLDADVGLSGVNFAVAETGTLCLVENEGNGRMCTTVPDVH
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCEEEEECCCCE
IAVTGIEKVVEKLEDVAPLYSLLTRSAIGQPITTYFNMISGPRKPGEKDGPREVHLVLLD
EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEE
NGRSQAYADEQLRKTLQCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGEIISPHLMGLEN
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHCHHHCCCCC
TSDLPTASSLCGACGEVCPVRIPIPEMLMRLREESQRPAGERVAHPLRGQGAAASGAERL
CCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHH
AWAGWRLVNASPNLYRMFGWAATRLRRHAPKNQLGWTQNHLPLTPASRTLHELVREREAS
HHHCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
KGTSA
CCCCC
>Mature Secondary Structure 
SESKITVYPSRAFKDNARLALSDGKLRQSLRGAMDFLMAKRLASFPDPAELAALRTLGE
CCCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GIRQRCLSRLPELLEQLEEKLTANGVQVHWAETAEEANRIIHGIVAGRQGKLMVKGKSMV
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCEEECCHHHH
SEEIELNHYLAERGVEAVESDMGEYIVQLAGEKPTHIIMPAIHKTKQDIARLFHEQLPDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCC
PYTEDVDALIQIGRRALRQKYLDADVGLSGVNFAVAETGTLCLVENEGNGRMCTTVPDVH
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCEEEEECCCCE
IAVTGIEKVVEKLEDVAPLYSLLTRSAIGQPITTYFNMISGPRKPGEKDGPREVHLVLLD
EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEE
NGRSQAYADEQLRKTLQCIRCGACMNHCPVYTRIGGHAYGTTYPGPIGEIISPHLMGLEN
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHCHHHCCCCC
TSDLPTASSLCGACGEVCPVRIPIPEMLMRLREESQRPAGERVAHPLRGQGAAASGAERL
CCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHH
AWAGWRLVNASPNLYRMFGWAATRLRRHAPKNQLGWTQNHLPLTPASRTLHELVREREAS
HHHCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
KGTSA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]