Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is ykgG [C]

Identifier: 34498484

GI number: 34498484

Start: 3308893

End: 3309591

Strand: Reverse

Name: ykgG [C]

Synonym: CV_3029

Alternate gene names: 34498484

Gene position: 3309591-3308893 (Counterclockwise)

Preceding gene: 34498485

Following gene: 34498483

Centisome position: 69.66

GC content: 67.81

Gene sequence:

>699_bases
ATGAGCGCCCGCGCCTCCATTCTGCAAAAGCTGCGCGCCGCGCCGCGGCAGAAACGCGCTCGGCCCGACCTGGATGGCCA
CTTCCGGCATTTCTCCAGCCAGGATGACGAACTGGCGAGACTGCGCCATTGGGCGGCGATGATGCGCGCGGTGAAGACCG
AAATCCTGTGGACGCGCGAGGCGGAGTGGGACGCGGCCTTGGCCGACTGGCTGGCGGTACATCCGCAACACTCGCTGCTG
TTGTCCGACACCCCGCATGGCCGGCGGCTGGCGCAGCGCCTTGAGGGCGTGGACAAGGCGCCGCGCATCGTCTGGTTCGA
CCGCGAGGTGGATGGCTGGAAGCCGGAGTTGTTTGAGGTCGCCGCCGGCTTCACCGCCGTCCGCTGTGGCATCGCCGCCA
CCGGCACGCTGGCCTTGTGGCCGGACGAGGCCGAGCCGCGGACGATGAGCCTGATCCCGCCCTTGCATATCGCCTTGTTC
GATACTTCCACGCTGTACCCGGATTTCTATTCGGCGATGAAGGGAGAAAACTGGGCAGCCGGCATGCCGACCAACGCGCT
ATTGGTCTCCGGCCCGTCCAAGACCGCCGACATCCAGCAGACGCTGGCCTACGGCGCGCACGGCCCGCGCGAGCTGCTGG
TGCTGGCCGTGCTGCCGCTGCGCATCGCCATCCACGATGTGGAAGGAGGCGGGCGATGA

Upstream 100 bases:

>100_bases
GCTGCCTGCTCAATATCAACGGCAAGCTGGGCCTGTGCGGCAGCGGCTTCCAGGGCCGCCATCTGGCCAGCTTTCTGCTG
GAGCGCACCGGGGGCAAGCG

Downstream 100 bases:

>100_bases
GCGAGAGCAAGATCACCGTCTACCCGTCCCGCGCCTTCAAGGACAACGCCAGGCTGGCGCTGAGCGACGGCAAGCTGAGG
CAAAGCCTGCGCGGCGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSARASILQKLRAAPRQKRARPDLDGHFRHFSSQDDELARLRHWAAMMRAVKTEILWTREAEWDAALADWLAVHPQHSLL
LSDTPHGRRLAQRLEGVDKAPRIVWFDREVDGWKPELFEVAAGFTAVRCGIAATGTLALWPDEAEPRTMSLIPPLHIALF
DTSTLYPDFYSAMKGENWAAGMPTNALLVSGPSKTADIQQTLAYGAHGPRELLVLAVLPLRIAIHDVEGGGR

Sequences:

>Translated_232_residues
MSARASILQKLRAAPRQKRARPDLDGHFRHFSSQDDELARLRHWAAMMRAVKTEILWTREAEWDAALADWLAVHPQHSLL
LSDTPHGRRLAQRLEGVDKAPRIVWFDREVDGWKPELFEVAAGFTAVRCGIAATGTLALWPDEAEPRTMSLIPPLHIALF
DTSTLYPDFYSAMKGENWAAGMPTNALLVSGPSKTADIQQTLAYGAHGPRELLVLAVLPLRIAIHDVEGGGR
>Mature_231_residues
SARASILQKLRAAPRQKRARPDLDGHFRHFSSQDDELARLRHWAAMMRAVKTEILWTREAEWDAALADWLAVHPQHSLLL
SDTPHGRRLAQRLEGVDKAPRIVWFDREVDGWKPELFEVAAGFTAVRCGIAATGTLALWPDEAEPRTMSLIPPLHIALFD
TSTLYPDFYSAMKGENWAAGMPTNALLVSGPSKTADIQQTLAYGAHGPRELLVLAVLPLRIAIHDVEGGGR

Specific function: Unknown

COG id: COG1556

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lutC/ykgG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003741
- InterPro:   IPR002698 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 25810; Mature: 25679

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARASILQKLRAAPRQKRARPDLDGHFRHFSSQDDELARLRHWAAMMRAVKTEILWTRE
CCHHHHHHHHHHCCHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECC
AEWDAALADWLAVHPQHSLLLSDTPHGRRLAQRLEGVDKAPRIVWFDREVDGWKPELFEV
CCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHH
AAGFTAVRCGIAATGTLALWPDEAEPRTMSLIPPLHIALFDTSTLYPDFYSAMKGENWAA
HHCHHHHHHCCEECCEEEECCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHHCCCCCCC
GMPTNALLVSGPSKTADIQQTLAYGAHGPRELLVLAVLPLRIAIHDVEGGGR
CCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCCCC
>Mature Secondary Structure 
SARASILQKLRAAPRQKRARPDLDGHFRHFSSQDDELARLRHWAAMMRAVKTEILWTRE
CHHHHHHHHHHCCHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECC
AEWDAALADWLAVHPQHSLLLSDTPHGRRLAQRLEGVDKAPRIVWFDREVDGWKPELFEV
CCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHH
AAGFTAVRCGIAATGTLALWPDEAEPRTMSLIPPLHIALFDTSTLYPDFYSAMKGENWAA
HHCHHHHHHCCEECCEEEECCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHHCCCCCCC
GMPTNALLVSGPSKTADIQQTLAYGAHGPRELLVLAVLPLRIAIHDVEGGGR
CCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]