| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is ykgG [C]
Identifier: 34498484
GI number: 34498484
Start: 3308893
End: 3309591
Strand: Reverse
Name: ykgG [C]
Synonym: CV_3029
Alternate gene names: 34498484
Gene position: 3309591-3308893 (Counterclockwise)
Preceding gene: 34498485
Following gene: 34498483
Centisome position: 69.66
GC content: 67.81
Gene sequence:
>699_bases ATGAGCGCCCGCGCCTCCATTCTGCAAAAGCTGCGCGCCGCGCCGCGGCAGAAACGCGCTCGGCCCGACCTGGATGGCCA CTTCCGGCATTTCTCCAGCCAGGATGACGAACTGGCGAGACTGCGCCATTGGGCGGCGATGATGCGCGCGGTGAAGACCG AAATCCTGTGGACGCGCGAGGCGGAGTGGGACGCGGCCTTGGCCGACTGGCTGGCGGTACATCCGCAACACTCGCTGCTG TTGTCCGACACCCCGCATGGCCGGCGGCTGGCGCAGCGCCTTGAGGGCGTGGACAAGGCGCCGCGCATCGTCTGGTTCGA CCGCGAGGTGGATGGCTGGAAGCCGGAGTTGTTTGAGGTCGCCGCCGGCTTCACCGCCGTCCGCTGTGGCATCGCCGCCA CCGGCACGCTGGCCTTGTGGCCGGACGAGGCCGAGCCGCGGACGATGAGCCTGATCCCGCCCTTGCATATCGCCTTGTTC GATACTTCCACGCTGTACCCGGATTTCTATTCGGCGATGAAGGGAGAAAACTGGGCAGCCGGCATGCCGACCAACGCGCT ATTGGTCTCCGGCCCGTCCAAGACCGCCGACATCCAGCAGACGCTGGCCTACGGCGCGCACGGCCCGCGCGAGCTGCTGG TGCTGGCCGTGCTGCCGCTGCGCATCGCCATCCACGATGTGGAAGGAGGCGGGCGATGA
Upstream 100 bases:
>100_bases GCTGCCTGCTCAATATCAACGGCAAGCTGGGCCTGTGCGGCAGCGGCTTCCAGGGCCGCCATCTGGCCAGCTTTCTGCTG GAGCGCACCGGGGGCAAGCG
Downstream 100 bases:
>100_bases GCGAGAGCAAGATCACCGTCTACCCGTCCCGCGCCTTCAAGGACAACGCCAGGCTGGCGCTGAGCGACGGCAAGCTGAGG CAAAGCCTGCGCGGCGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSARASILQKLRAAPRQKRARPDLDGHFRHFSSQDDELARLRHWAAMMRAVKTEILWTREAEWDAALADWLAVHPQHSLL LSDTPHGRRLAQRLEGVDKAPRIVWFDREVDGWKPELFEVAAGFTAVRCGIAATGTLALWPDEAEPRTMSLIPPLHIALF DTSTLYPDFYSAMKGENWAAGMPTNALLVSGPSKTADIQQTLAYGAHGPRELLVLAVLPLRIAIHDVEGGGR
Sequences:
>Translated_232_residues MSARASILQKLRAAPRQKRARPDLDGHFRHFSSQDDELARLRHWAAMMRAVKTEILWTREAEWDAALADWLAVHPQHSLL LSDTPHGRRLAQRLEGVDKAPRIVWFDREVDGWKPELFEVAAGFTAVRCGIAATGTLALWPDEAEPRTMSLIPPLHIALF DTSTLYPDFYSAMKGENWAAGMPTNALLVSGPSKTADIQQTLAYGAHGPRELLVLAVLPLRIAIHDVEGGGR >Mature_231_residues SARASILQKLRAAPRQKRARPDLDGHFRHFSSQDDELARLRHWAAMMRAVKTEILWTREAEWDAALADWLAVHPQHSLLL SDTPHGRRLAQRLEGVDKAPRIVWFDREVDGWKPELFEVAAGFTAVRCGIAATGTLALWPDEAEPRTMSLIPPLHIALFD TSTLYPDFYSAMKGENWAAGMPTNALLVSGPSKTADIQQTLAYGAHGPRELLVLAVLPLRIAIHDVEGGGR
Specific function: Unknown
COG id: COG1556
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lutC/ykgG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003741 - InterPro: IPR002698 [H]
Pfam domain/function: PF02589 DUF162 [H]
EC number: NA
Molecular weight: Translated: 25810; Mature: 25679
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARASILQKLRAAPRQKRARPDLDGHFRHFSSQDDELARLRHWAAMMRAVKTEILWTRE CCHHHHHHHHHHCCHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECC AEWDAALADWLAVHPQHSLLLSDTPHGRRLAQRLEGVDKAPRIVWFDREVDGWKPELFEV CCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHH AAGFTAVRCGIAATGTLALWPDEAEPRTMSLIPPLHIALFDTSTLYPDFYSAMKGENWAA HHCHHHHHHCCEECCEEEECCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHHCCCCCCC GMPTNALLVSGPSKTADIQQTLAYGAHGPRELLVLAVLPLRIAIHDVEGGGR CCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCCCC >Mature Secondary Structure SARASILQKLRAAPRQKRARPDLDGHFRHFSSQDDELARLRHWAAMMRAVKTEILWTRE CHHHHHHHHHHCCHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECC AEWDAALADWLAVHPQHSLLLSDTPHGRRLAQRLEGVDKAPRIVWFDREVDGWKPELFEV CCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHH AAGFTAVRCGIAATGTLALWPDEAEPRTMSLIPPLHIALFDTSTLYPDFYSAMKGENWAA HHCHHHHHHCCEECCEEEECCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHHCCCCCCC GMPTNALLVSGPSKTADIQQTLAYGAHGPRELLVLAVLPLRIAIHDVEGGGR CCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]