The gene/protein map for NC_005085 is currently unavailable.
Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34498478

Identifier: 34498478

GI number: 34498478

Start: 3300302

End: 3301090

Strand: Reverse

Name: 34498478

Synonym: CV_3023

Alternate gene names: NA

Gene position: 3301090-3300302 (Counterclockwise)

Preceding gene: 34498479

Following gene: 34498477

Centisome position: 69.48

GC content: 68.06

Gene sequence:

>789_bases
ATGAGGGGTGGGCAAACGAACCTCCGGCTATGGGCCGGCCTGCTGCTGGCCTGCGCCGGCGCGCAGGCGCAGGCGCAGGC
GGCGTCGCGCGAGCTGTATTTCGTCACCCAGCTGTTTCCGCCCTTCATCACCCAGAGCGCCGACGGCAAGCTGGACGGCG
CCTTGGTGGCCATCCTGCGCGAAGCCTGCCGGCGGGCAGACTGGAACTGCAAGGTCCAGGCCATGGTGTGGAAACGCGCG
CTGCTGACTGTCAGCCAGGGCGGCGCCGACGGGTTGGTGCTGGCGCAGGACGCGCCGGAGCGGCGCGCGGTGATGGAGCT
GTCCAAGCCGGTGCTGGCCAGCAGCTACGGCCTTTATGTGAAAGCCGACAGCGCCATGCGCTACAGGCAGCCTGCCGATC
TCGCCGGCAAAACTTTGGCGGTGTACGGCCCGTCGCTGTCGCAGATCAATAGCGAGCGCCTGGTCCAGGGCGTGGCCGGC
GTGAACCTGACCGTGGAGCTGGACCCGGAAACGGTGCTGCGCAAGTTGGGGGCGGGCCGTTACGGCCATAACGCGGTGGC
GTTTTCCAATGACGATGTCGCCCGTTACTGGATCAAGCGCGACGGCCTGGGCAATCTGCGCAAGCTGGCCGAGGTCAAGC
CACTGACTTACCTGTACGGCTTCACCCGCAGCCGGGTGAAGCCCGGCATGCTGGAAACGTTCAACCGCGCGCTGGACAGC
ATGTGCCGCGACGGCAGCCTGGCCAGGCTGGCCGCGCCGTCCGGCATCCGGCTGGCCACTTGCCGCTGA

Upstream 100 bases:

>100_bases
TGGCAGCGGCCGTCGCTGGCCGCTTGGCGCGGCCGGCAGGCTCGCTGATCCGGCCCGACTCTCTCTATACTGCCGGTAAA
GAAGAGCGGGGACGGAGACG

Downstream 100 bases:

>100_bases
GTGCGGCAAGGACGAGTCAAAGCGGTTATCATTCAGGCATTCCCTAGCCGCCGCCGGCGGCGCCACACGCAGCGCAGAAC
AAGCATAATCATGTCGCAAC

Product: amino acid ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MRGGQTNLRLWAGLLLACAGAQAQAQAASRELYFVTQLFPPFITQSADGKLDGALVAILREACRRADWNCKVQAMVWKRA
LLTVSQGGADGLVLAQDAPERRAVMELSKPVLASSYGLYVKADSAMRYRQPADLAGKTLAVYGPSLSQINSERLVQGVAG
VNLTVELDPETVLRKLGAGRYGHNAVAFSNDDVARYWIKRDGLGNLRKLAEVKPLTYLYGFTRSRVKPGMLETFNRALDS
MCRDGSLARLAAPSGIRLATCR

Sequences:

>Translated_262_residues
MRGGQTNLRLWAGLLLACAGAQAQAQAASRELYFVTQLFPPFITQSADGKLDGALVAILREACRRADWNCKVQAMVWKRA
LLTVSQGGADGLVLAQDAPERRAVMELSKPVLASSYGLYVKADSAMRYRQPADLAGKTLAVYGPSLSQINSERLVQGVAG
VNLTVELDPETVLRKLGAGRYGHNAVAFSNDDVARYWIKRDGLGNLRKLAEVKPLTYLYGFTRSRVKPGMLETFNRALDS
MCRDGSLARLAAPSGIRLATCR
>Mature_262_residues
MRGGQTNLRLWAGLLLACAGAQAQAQAASRELYFVTQLFPPFITQSADGKLDGALVAILREACRRADWNCKVQAMVWKRA
LLTVSQGGADGLVLAQDAPERRAVMELSKPVLASSYGLYVKADSAMRYRQPADLAGKTLAVYGPSLSQINSERLVQGVAG
VNLTVELDPETVLRKLGAGRYGHNAVAFSNDDVARYWIKRDGLGNLRKLAEVKPLTYLYGFTRSRVKPGMLETFNRALDS
MCRDGSLARLAAPSGIRLATCR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28492; Mature: 28492

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGGQTNLRLWAGLLLACAGAQAQAQAASRELYFVTQLFPPFITQSADGKLDGALVAILR
CCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCEEEHHHHCCHHHCCCCCCCHHHHHHHHHH
EACRRADWNCKVQAMVWKRALLTVSQGGADGLVLAQDAPERRAVMELSKPVLASSYGLYV
HHHHCCCCCCEEHHHHHHHHHHHEECCCCCCEEEECCCCHHHHHHHHHCCHHHCCCCEEE
KADSAMRYRQPADLAGKTLAVYGPSLSQINSERLVQGVAGVNLTVELDPETVLRKLGAGR
EECCCHHHCCCCCCCCCEEEEECCCHHHCCHHHHHHHHCCCEEEEEECHHHHHHHHCCCC
YGHNAVAFSNDDVARYWIKRDGLGNLRKLAEVKPLTYLYGFTRSRVKPGMLETFNRALDS
CCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHH
MCRDGSLARLAAPSGIRLATCR
HHCCCCEEEEECCCCCEEEECC
>Mature Secondary Structure
MRGGQTNLRLWAGLLLACAGAQAQAQAASRELYFVTQLFPPFITQSADGKLDGALVAILR
CCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCEEEHHHHCCHHHCCCCCCCHHHHHHHHHH
EACRRADWNCKVQAMVWKRALLTVSQGGADGLVLAQDAPERRAVMELSKPVLASSYGLYV
HHHHCCCCCCEEHHHHHHHHHHHEECCCCCCEEEECCCCHHHHHHHHHCCHHHCCCCEEE
KADSAMRYRQPADLAGKTLAVYGPSLSQINSERLVQGVAGVNLTVELDPETVLRKLGAGR
EECCCHHHCCCCCCCCCEEEEECCCHHHCCHHHHHHHHCCCEEEEEECHHHHHHHHCCCC
YGHNAVAFSNDDVARYWIKRDGLGNLRKLAEVKPLTYLYGFTRSRVKPGMLETFNRALDS
CCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHH
MCRDGSLARLAAPSGIRLATCR
HHCCCCEEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA