| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yfcF [H]
Identifier: 34498479
GI number: 34498479
Start: 3301143
End: 3301754
Strand: Reverse
Name: yfcF [H]
Synonym: CV_3024
Alternate gene names: 34498479
Gene position: 3301754-3301143 (Counterclockwise)
Preceding gene: 34498480
Following gene: 34498478
Centisome position: 69.49
GC content: 69.12
Gene sequence:
>612_bases ATGCTGAAACTCTATGTCGATCACGATTTTTTCAGCCCCTACGCGATGGCCGCCTTCGTCGCGCTGAGCGAAAAGGGCCT GCCCTTCGAAACGCTGACCCGCGATCTGGCAGCGGGCCAGCAGTTCGAGCCCGGCTACCGCTCGCAATCGCTGGCTTCCC GCGTGCCGATGCTGTTGGACGGCGATTTCGCGCTCAGCGAATCGTCGGCCATCATCGAATATCTGGAAGACGCCTATCCC GACACCGTCCGCGTGTTGCCGGCCGATCCAAAAGCCCGCGCCCGCGCGCGCCAGCTGCAGGCGTGGCTGCGCAGCGACCT GCTGCCGCTGCGCGACGAACGCAGCACCGAGACGGTGTTCGGCCGCAAGCCGGCTTTGCCGCTGGGCGAGGCGGCGCGCA AGGCGGCGGACAAGCTGATCGCGGTGGCCGAGGCGGTGGCGCCGGCGGACGGCGGCGATCTGTTCGGCGCCTGGTGCGTG GCGGACGCCGAGCTGGCCCTGCTGCTGAAGCGGCTGACGGCGGACGAGTTGCCGCCGTGGTTGTCCGCTTACGCCGAAAG GCAATGGCAGCGGCCGTCGCTGGCCGCTTGGCGCGGCCGGCAGGCTCGCTGA
Upstream 100 bases:
>100_bases ACTGGATTGTTCGATCCTGCTTGACGCCCGGTGCTCCGCCGCCGGCTTGGCAGCGGACGCTTCGGCGATTAGCATGGCGT TTTCCCATCAAGATGCCGCC
Downstream 100 bases:
>100_bases TCCGGCCCGACTCTCTCTATACTGCCGGTAAAGAAGAGCGGGGACGGAGACGATGAGGGGTGGGCAAACGAACCTCCGGC TATGGGCCGGCCTGCTGCTG
Product: glutathione S-transferase
Products: HX; R-S-glutathione
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MLKLYVDHDFFSPYAMAAFVALSEKGLPFETLTRDLAAGQQFEPGYRSQSLASRVPMLLDGDFALSESSAIIEYLEDAYP DTVRVLPADPKARARARQLQAWLRSDLLPLRDERSTETVFGRKPALPLGEAARKAADKLIAVAEAVAPADGGDLFGAWCV ADAELALLLKRLTADELPPWLSAYAERQWQRPSLAAWRGRQAR
Sequences:
>Translated_203_residues MLKLYVDHDFFSPYAMAAFVALSEKGLPFETLTRDLAAGQQFEPGYRSQSLASRVPMLLDGDFALSESSAIIEYLEDAYP DTVRVLPADPKARARARQLQAWLRSDLLPLRDERSTETVFGRKPALPLGEAARKAADKLIAVAEAVAPADGGDLFGAWCV ADAELALLLKRLTADELPPWLSAYAERQWQRPSLAAWRGRQAR >Mature_203_residues MLKLYVDHDFFSPYAMAAFVALSEKGLPFETLTRDLAAGQQFEPGYRSQSLASRVPMLLDGDFALSESSAIIEYLEDAYP DTVRVLPADPKARARARQLQAWLRSDLLPLRDERSTETVFGRKPALPLGEAARKAADKLIAVAEAVAPADGGDLFGAWCV ADAELALLLKRLTADELPPWLSAYAERQWQRPSLAAWRGRQAR
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788639, Length=197, Percent_Identity=48.2233502538071, Blast_Score=177, Evalue=4e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF02798 GST_N [H]
EC number: 2.5.1.18
Molecular weight: Translated: 22461; Mature: 22461
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLYVDHDFFSPYAMAAFVALSEKGLPFETLTRDLAAGQQFEPGYRSQSLASRVPMLLD CEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEC GDFALSESSAIIEYLEDAYPDTVRVLPADPKARARARQLQAWLRSDLLPLRDERSTETVF CCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHC GRKPALPLGEAARKAADKLIAVAEAVAPADGGDLFGAWCVADAELALLLKRLTADELPPW CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH LSAYAERQWQRPSLAAWRGRQAR HHHHHHHHCCCCCHHHHCCCCCC >Mature Secondary Structure MLKLYVDHDFFSPYAMAAFVALSEKGLPFETLTRDLAAGQQFEPGYRSQSLASRVPMLLD CEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEC GDFALSESSAIIEYLEDAYPDTVRVLPADPKARARARQLQAWLRSDLLPLRDERSTETVF CCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHC GRKPALPLGEAARKAADKLIAVAEAVAPADGGDLFGAWCVADAELALLLKRLTADELPPW CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH LSAYAERQWQRPSLAAWRGRQAR HHHHHHHHCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: RX; glutathione
Specific reaction: RX + glutathione = HX + R-S-glutathione
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]