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The map label for this gene is flaD [H]

Identifier: 34498466

GI number: 34498466

Start: 3286802

End: 3287920

Strand: Reverse

Name: flaD [H]

Synonym: CV_3011

Alternate gene names: 34498466

Gene position: 3287920-3286802 (Counterclockwise)

Preceding gene: 34498470

Following gene: 34498465

Centisome position: 69.2

GC content: 62.82

Gene sequence:

>1119_bases
ATGCTGAGCCTGCACACCAATATCGCGGCACTGAACACCAAGTCCAACATGAACAGCACCCAGGGCGCGCTGTCCACCTC
CATGACCCGCCTGGGCACCGGCCTGCGCATCAACTCCGCGATGGACGACGCCGCCGGCCTGCAGATCGCCACCCGTCTGG
ACGCCCAAAGCCGCGGCATGACCGTCGCCATGAAGAACGCCCAGAACGGCATCTCCATGCTGCAGACCGCCGAAGGCGCG
CTGAACGAAGTGACCAACATCCTGCAACGGATGAAGGACCTGGGCACCGAAGGCGCCAACGGCACCACCACCGCAGCCGA
CAAGACCGCGATGCAGGCAGAGTTCGACCAGCTGGGCAAGGAACTGACCAACATCATGAAGAACACCTCCTTCGGCGGCG
AGAAGCTGCTGCAAGGCGGCAAAGTGGCCAGCGCCCTGAGCTTCCAGATCGGTTCCGCCGCAGAAGAAACCATGTCGGTG
GATCTGAGCGGCAATATGAAGTCGTTGGACGACTCGCTGGGCAAGGTGTCGGCCAACTACGAAAAGACGATGACCGCCGA
CGAGAAGGCCGCCGCCGACAAGGCCAAGCGCGATAAGCAGATTACCGCTGCCAACGGCGTACTGGACGCCACCGCCAAGA
CTGCAGCGGAAGCCGCCGCCAAAACCGCCGCAGGCGGCAAGGACCAGGCTGCCATCACCGCGATGGCTAGCGGCACCGAC
GCCGAGAAAAAGGCCAAGGCCGACGCTCAGGCTCAATACGACAACGGCTACCTGGCCGAGGCTTCCAAGAACGCCGATGC
CAAGACCGCGATCGACGCCGCTGTCGCCAATACCGAAATCGGCAAGTCCGACACCATCACCACCATCAACGCCGCGCTGG
ACGCCGTCGGCACCGTGCGCTCCGCGCTGGGCGCCAACGCCAACCGTCTGGACCACGTGATCAACAACCTGTCGAACGTG
AACAACAACACGCTGGCAGCCAAGGGCCGCATCATGGACACCGACTACGCCAACGAAAGCTCCAACATGACCGCCAAGCA
GATGCTGATGCAAGCCAGCACCTCCATGCTGAAGCAAAGCGGCAGCATGAGCAGCCTGGCCATGTCCCTGCTGCAGTAA

Upstream 100 bases:

>100_bases
TCACGTCTTGTTGAGATTTAAGTTCGCTGCGATAAGCGCCGCCTTGCAAGGGTAACGGCAGCCATGCCGCTTACCCAACC
AAACCTGACGGAGCATTTCC

Downstream 100 bases:

>100_bases
TCATCGACGCGCGGCCTTGCGCCGCGGCGATGCAAGCCAGTGGTCCGCCACTGGCTTTTTGCTTTTTCCATCCGCCGCTT
GGGCCGCGTGGTAGAAAATG

Product: flagellin D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MLSLHTNIAALNTKSNMNSTQGALSTSMTRLGTGLRINSAMDDAAGLQIATRLDAQSRGMTVAMKNAQNGISMLQTAEGA
LNEVTNILQRMKDLGTEGANGTTTAADKTAMQAEFDQLGKELTNIMKNTSFGGEKLLQGGKVASALSFQIGSAAEETMSV
DLSGNMKSLDDSLGKVSANYEKTMTADEKAAADKAKRDKQITAANGVLDATAKTAAEAAAKTAAGGKDQAAITAMASGTD
AEKKAKADAQAQYDNGYLAEASKNADAKTAIDAAVANTEIGKSDTITTINAALDAVGTVRSALGANANRLDHVINNLSNV
NNNTLAAKGRIMDTDYANESSNMTAKQMLMQASTSMLKQSGSMSSLAMSLLQ

Sequences:

>Translated_372_residues
MLSLHTNIAALNTKSNMNSTQGALSTSMTRLGTGLRINSAMDDAAGLQIATRLDAQSRGMTVAMKNAQNGISMLQTAEGA
LNEVTNILQRMKDLGTEGANGTTTAADKTAMQAEFDQLGKELTNIMKNTSFGGEKLLQGGKVASALSFQIGSAAEETMSV
DLSGNMKSLDDSLGKVSANYEKTMTADEKAAADKAKRDKQITAANGVLDATAKTAAEAAAKTAAGGKDQAAITAMASGTD
AEKKAKADAQAQYDNGYLAEASKNADAKTAIDAAVANTEIGKSDTITTINAALDAVGTVRSALGANANRLDHVINNLSNV
NNNTLAAKGRIMDTDYANESSNMTAKQMLMQASTSMLKQSGSMSSLAMSLLQ
>Mature_372_residues
MLSLHTNIAALNTKSNMNSTQGALSTSMTRLGTGLRINSAMDDAAGLQIATRLDAQSRGMTVAMKNAQNGISMLQTAEGA
LNEVTNILQRMKDLGTEGANGTTTAADKTAMQAEFDQLGKELTNIMKNTSFGGEKLLQGGKVASALSFQIGSAAEETMSV
DLSGNMKSLDDSLGKVSANYEKTMTADEKAAADKAKRDKQITAANGVLDATAKTAAEAAAKTAAGGKDQAAITAMASGTD
AEKKAKADAQAQYDNGYLAEASKNADAKTAIDAAVANTEIGKSDTITTINAALDAVGTVRSALGANANRLDHVINNLSNV
NNNTLAAKGRIMDTDYANESSNMTAKQMLMQASTSMLKQSGSMSSLAMSLLQ

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=159, Percent_Identity=39.622641509434, Blast_Score=113, Evalue=3e-26,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 38430; Mature: 38430

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLHTNIAALNTKSNMNSTQGALSTSMTRLGTGLRINSAMDDAAGLQIATRLDAQSRGM
CCEECCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHCCCHHHHCCCCCCCC
TVAMKNAQNGISMLQTAEGALNEVTNILQRMKDLGTEGANGTTTAADKTAMQAEFDQLGK
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
ELTNIMKNTSFGGEKLLQGGKVASALSFQIGSAAEETMSVDLSGNMKSLDDSLGKVSANY
HHHHHHHCCCCCHHHHHCCCCHHHHHHHHHCCCHHHHEEEECCCCHHHHHHHHHHHCCCH
EKTMTADEKAAADKAKRDKQITAANGVLDATAKTAAEAAAKTAAGGKDQAAITAMASGTD
HHHCCCHHHHHHHHHHHCCEEEHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
AEKKAKADAQAQYDNGYLAEASKNADAKTAIDAAVANTEIGKSDTITTINAALDAVGTVR
HHHHHHHCCHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
SALGANANRLDHVINNLSNVNNNTLAAKGRIMDTDYANESSNMTAKQMLMQASTSMLKQS
HHHCCCHHHHHHHHHHHHCCCCCEEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHC
GSMSSLAMSLLQ
CCHHHHHHHHHC
>Mature Secondary Structure
MLSLHTNIAALNTKSNMNSTQGALSTSMTRLGTGLRINSAMDDAAGLQIATRLDAQSRGM
CCEECCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHCCCHHHHCCCCCCCC
TVAMKNAQNGISMLQTAEGALNEVTNILQRMKDLGTEGANGTTTAADKTAMQAEFDQLGK
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
ELTNIMKNTSFGGEKLLQGGKVASALSFQIGSAAEETMSVDLSGNMKSLDDSLGKVSANY
HHHHHHHCCCCCHHHHHCCCCHHHHHHHHHCCCHHHHEEEECCCCHHHHHHHHHHHCCCH
EKTMTADEKAAADKAKRDKQITAANGVLDATAKTAAEAAAKTAAGGKDQAAITAMASGTD
HHHCCCHHHHHHHHHHHCCEEEHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
AEKKAKADAQAQYDNGYLAEASKNADAKTAIDAAVANTEIGKSDTITTINAALDAVGTVR
HHHHHHHCCHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
SALGANANRLDHVINNLSNVNNNTLAAKGRIMDTDYANESSNMTAKQMLMQASTSMLKQS
HHHCCCHHHHHHHHHHHHCCCCCEEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHC
GSMSSLAMSLLQ
CCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2123866; 9620973; 7682214 [H]