| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is ntpA [H]
Identifier: 34498415
GI number: 34498415
Start: 3239955
End: 3240404
Strand: Reverse
Name: ntpA [H]
Synonym: CV_2960
Alternate gene names: 34498415
Gene position: 3240404-3239955 (Counterclockwise)
Preceding gene: 34498416
Following gene: 34498414
Centisome position: 68.2
GC content: 69.56
Gene sequence:
>450_bases ATGGGCAGCAAGCAGCCGGTGTCGGTGCTGGTGGTGATACACAGCCGGGATGGCCGGGCGCTGCTGATGGAGCGGGCGGA CAAGCCCGGCTACTGGCAGTCGGTGACCGGCAGCCGCGAAGGCGGCGAAGACCTGATGGACACCGCCCGCCGCGAGGTGG CGGAGGAGACTGGCCTGGACGCGTCCCGCTTCGCGCTCAGCGACTGGCACATCGTCAACCGCTACGAAATCTACGAGCAC TGGCGCCACCGTTACCCGGAAGGCGTCACCCACAACGACGAGCACGTGTTCGGCCTGCTGCTGCCCGAGCCCTGCGAGGT GGCGCTGGCGCCGCGCGAGCATCTGGGCTACCGCTGGCTGCCGTGGCATGAGGCCGCCGCGCTGGCGTTCTCGCCGTCCA ACGCCGAGGCGCTGCGCATGCTGCCGGAAAAGCTGGGTTTGAGCGGCTGA
Upstream 100 bases:
>100_bases GGTCCACCGCTCGCGGGTGTTCGAGAAGATGGGCGTCAAGTCCGCGGTGGAGCTGGCCGGCATGCTGGCCGCGCCGGGCG CGCAGGGAGGCAAGATCTAG
Downstream 100 bases:
>100_bases TCCGCAGGAATGCCAATCCATGGACAAAGCCCGCTCAGGCGGGCTTTGTCGCGTCCGGGAGCCTGAGCTTGCCGTCTGCT TATGAAACTGGCATCGATGG
Product: dATP pyrophosphohydrolase
Products: AMP; diphosphate
Alternate protein names: dATP pyrophosphohydrolase [H]
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MGSKQPVSVLVVIHSRDGRALLMERADKPGYWQSVTGSREGGEDLMDTARREVAEETGLDASRFALSDWHIVNRYEIYEH WRHRYPEGVTHNDEHVFGLLLPEPCEVALAPREHLGYRWLPWHEAAALAFSPSNAEALRMLPEKLGLSG
Sequences:
>Translated_149_residues MGSKQPVSVLVVIHSRDGRALLMERADKPGYWQSVTGSREGGEDLMDTARREVAEETGLDASRFALSDWHIVNRYEIYEH WRHRYPEGVTHNDEHVFGLLLPEPCEVALAPREHLGYRWLPWHEAAALAFSPSNAEALRMLPEKLGLSG >Mature_148_residues GSKQPVSVLVVIHSRDGRALLMERADKPGYWQSVTGSREGGEDLMDTARREVAEETGLDASRFALSDWHIVNRYEIYEHW RHRYPEGVTHNDEHVFGLLLPEPCEVALAPREHLGYRWLPWHEAAALAFSPSNAEALRMLPEKLGLSG
Specific function: Catalyzes the hydrolysis of dihydroneopterin triphosphate to dihydroneopterin monophosphate and pyrophosphate. Required for efficient folate biosynthesis. Can also hydrolyze nucleoside triphosphates with a preference for dATP [H]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1788172, Length=138, Percent_Identity=46.3768115942029, Blast_Score=111, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003564 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.8
Molecular weight: Translated: 16900; Mature: 16769
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSKQPVSVLVVIHSRDGRALLMERADKPGYWQSVTGSREGGEDLMDTARREVAEETGLD CCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC ASRFALSDWHIVNRYEIYEHWRHRYPEGVTHNDEHVFGLLLPEPCEVALAPREHLGYRWL HHHEEECCCEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEECCHHHCCCCCC PWHEAAALAFSPSNAEALRMLPEKLGLSG CCCCCEEEEECCCCHHHHHHHHHHHCCCC >Mature Secondary Structure GSKQPVSVLVVIHSRDGRALLMERADKPGYWQSVTGSREGGEDLMDTARREVAEETGLD CCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC ASRFALSDWHIVNRYEIYEHWRHRYPEGVTHNDEHVFGLLLPEPCEVALAPREHLGYRWL HHHEEECCCEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEECCHHHCCCCCC PWHEAAALAFSPSNAEALRMLPEKLGLSG CCCCCEEEEECCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O
Specific reaction: ATP + H2O = AMP + diphosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]