| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yvyE [H]
Identifier: 34498381
GI number: 34498381
Start: 3205630
End: 3206220
Strand: Reverse
Name: yvyE [H]
Synonym: CV_2926
Alternate gene names: 34498381
Gene position: 3206220-3205630 (Counterclockwise)
Preceding gene: 34498390
Following gene: 34498380
Centisome position: 67.48
GC content: 70.56
Gene sequence:
>591_bases ATGTTCCAGTTGCAAGCCGAGGCCCGCGCCGAGGTGGAAATCCGCAAGAGCCGCTTCATCGGCATCGTGTCGCCTGCGGC CAGCCGCGACGAGGCGTTGCGCGAGCTGGCGGCCATCCGCGCGCGCTGGCCGGATGCCCGCCATTACTGCGCGGTGCTGC TGTGCGCCGGCGACTCCATGCTGGACGACGACGGTGAGCCATCGGGCACCGCGGCCAGGCCGATGTACAACGTGTTGCGG CACAAGGACATCACCAATGTGCTGGCGGTGGTGGTGCGCTATTTCGGCGGCATCAAACTGGGTGCGGGCGGCCTGGTCAG GGCCTACACTCAAGCTGTCAACGCCGCGCTGGCCGAGGCCACGCTCATGGAGCTGAGCCGGACCTGCCTGCGGCGGCTGG CGGTGGACTTCGCCGGCGAGGCCCGCCTGCGGCACGCGTGCCAGGAGATGGGGCTGGCGGTGGTGGATCAGCAATACGCC GACAGGGTCTGGCTCACGGTGGAGCTGCCCGAGGCGGAGATCGACGAGCGGTTGGCCCGCCTGGCCGACCGGATGGCCGG CGCGCTGGAGGTGGCGGCGCCGGACGGCTGA
Upstream 100 bases:
>100_bases CCCGCTTTCAGTCTAGACCGCCGGCGCGGTGTCTGCGGTACCGGAATCGCGGCCTCCGGGTTTACAATGCCCGCCCGTTT CAGACTGCAGGATGCGCCGA
Downstream 100 bases:
>100_bases GAACGCAATGAACGGGAGGCGCAGATGACGCAGCAGAAACAGTACCGCCTGGTGACGCGCAGCGATTTCGACGGACTGGT GTGCGCGGTGTTGCTCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MFQLQAEARAEVEIRKSRFIGIVSPAASRDEALRELAAIRARWPDARHYCAVLLCAGDSMLDDDGEPSGTAARPMYNVLR HKDITNVLAVVVRYFGGIKLGAGGLVRAYTQAVNAALAEATLMELSRTCLRRLAVDFAGEARLRHACQEMGLAVVDQQYA DRVWLTVELPEAEIDERLARLADRMAGALEVAAPDG
Sequences:
>Translated_196_residues MFQLQAEARAEVEIRKSRFIGIVSPAASRDEALRELAAIRARWPDARHYCAVLLCAGDSMLDDDGEPSGTAARPMYNVLR HKDITNVLAVVVRYFGGIKLGAGGLVRAYTQAVNAALAEATLMELSRTCLRRLAVDFAGEARLRHACQEMGLAVVDQQYA DRVWLTVELPEAEIDERLARLADRMAGALEVAAPDG >Mature_196_residues MFQLQAEARAEVEIRKSRFIGIVSPAASRDEALRELAAIRARWPDARHYCAVLLCAGDSMLDDDGEPSGTAARPMYNVLR HKDITNVLAVVVRYFGGIKLGAGGLVRAYTQAVNAALAEATLMELSRTCLRRLAVDFAGEARLRHACQEMGLAVVDQQYA DRVWLTVELPEAEIDERLARLADRMAGALEVAAPDG
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=186, Percent_Identity=36.0215053763441, Blast_Score=87, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 21424; Mature: 21424
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQLQAEARAEVEIRKSRFIGIVSPAASRDEALRELAAIRARWPDARHYCAVLLCAGDSM CCCCCCHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHEEHEECCCCC LDDDGEPSGTAARPMYNVLRHKDITNVLAVVVRYFGGIKLGAGGLVRAYTQAVNAALAEA CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHH TLMELSRTCLRRLAVDFAGEARLRHACQEMGLAVVDQQYADRVWLTVELPEAEIDERLAR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCEEEEEEECCHHHHHHHHHH LADRMAGALEVAAPDG HHHHHHCCEEECCCCC >Mature Secondary Structure MFQLQAEARAEVEIRKSRFIGIVSPAASRDEALRELAAIRARWPDARHYCAVLLCAGDSM CCCCCCHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHEEHEECCCCC LDDDGEPSGTAARPMYNVLRHKDITNVLAVVVRYFGGIKLGAGGLVRAYTQAVNAALAEA CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHH TLMELSRTCLRRLAVDFAGEARLRHACQEMGLAVVDQQYADRVWLTVELPEAEIDERLAR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCEEEEEEECCHHHHHHHHHH LADRMAGALEVAAPDG HHHHHHCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 3141378; 8313894 [H]