| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498380
Identifier: 34498380
GI number: 34498380
Start: 3204670
End: 3205605
Strand: Reverse
Name: 34498380
Synonym: CV_2925
Alternate gene names: NA
Gene position: 3205605-3204670 (Counterclockwise)
Preceding gene: 34498381
Following gene: 34498378
Centisome position: 67.47
GC content: 62.29
Gene sequence:
>936_bases ATGACGCAGCAGAAACAGTACCGCCTGGTGACGCGCAGCGATTTCGACGGACTGGTGTGCGCGGTGTTGCTCAACGAGCT CAAGCTGATCCGCGAGGTGATGTTCGCTCACCCCAAGGACATGCAGGACGGCAAGGTGGAAATCACCGGCGACGACATCA CCACCAACCTGCCTTACGTCGCCAAGGCGCACTTGGTGTTCGACCATCATCTGTCGGAAACCCTGCGCAACGCCACCGAT GTCGACAATTACGTGATCGACCCGCGCGCGCCGTCGGCGGCGCGGGTGGTGTACAACCATTATGGCGGCAAGAAGGCGTT TCCCGGCATCAGCGACGAGATGATGGCGGCGGTGGACAAGGCGGACTCCGCCCAGTTCTCCATCGACGAAATCCTGAATC CCAAGGACTGGGTGCTGCTGAACTACCTGATGGACGCGCGCACCGGGCTCGGCCGCTTCCGCGAGTTCAAGGTCAGCAAC TTCCAGCTGATGATGGATTTGATCGGCTACTGCCGCAATCACGGCATCGACGAAATCCTGCAGCTGCCGGACGTGCAGGA GCGGGTGGCGCTGTATCGCCAGTACGAGACGCTGGCCAAGGAGCAGATCCGCCGCTGTTCGCGCGTGCACGGCAACGTGG TGGTGCTGAACCTGCTGCACGAGGAAACCATCTATCCGACCAACCGCTTCATGATCTACGCGCTGTTTCCCGACTGCAAC ATCTCCATCCACCAGATGTGGGGGCTGAACAAGCAGAACACCGTGTTCGCGGTGGGCAAGTCCATCGTCAACCGCACCTC GCGCACCAATGTCGGCGCGCTGATGCTGCAATACGGCGGCGGCGGCCACGAGGCGGCCGGCACCTGCCAGGTGGGGCATG ACCAGTCCGAGGATGTGCTGGACGAGCTGATCGCCCGCATCCGCGGGCACGGCTAG
Upstream 100 bases:
>100_bases GGAGATCGACGAGCGGTTGGCCCGCCTGGCCGACCGGATGGCCGGCGCGCTGGAGGTGGCGGCGCCGGACGGCTGAGAAC GCAATGAACGGGAGGCGCAG
Downstream 100 bases:
>100_bases GGCGGGCGTGGCCGGCGACGGTCTGATGCCGCCGGCCCTGTGGCTTCGCTTACAGCTCGCGCAGCAGCGCCAGCGCCTGC AGCAGATCCGGGCAGGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Exopolyphosphatase-Like Protein; Exopolyphosphatase
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MTQQKQYRLVTRSDFDGLVCAVLLNELKLIREVMFAHPKDMQDGKVEITGDDITTNLPYVAKAHLVFDHHLSETLRNATD VDNYVIDPRAPSAARVVYNHYGGKKAFPGISDEMMAAVDKADSAQFSIDEILNPKDWVLLNYLMDARTGLGRFREFKVSN FQLMMDLIGYCRNHGIDEILQLPDVQERVALYRQYETLAKEQIRRCSRVHGNVVVLNLLHEETIYPTNRFMIYALFPDCN ISIHQMWGLNKQNTVFAVGKSIVNRTSRTNVGALMLQYGGGGHEAAGTCQVGHDQSEDVLDELIARIRGHG
Sequences:
>Translated_311_residues MTQQKQYRLVTRSDFDGLVCAVLLNELKLIREVMFAHPKDMQDGKVEITGDDITTNLPYVAKAHLVFDHHLSETLRNATD VDNYVIDPRAPSAARVVYNHYGGKKAFPGISDEMMAAVDKADSAQFSIDEILNPKDWVLLNYLMDARTGLGRFREFKVSN FQLMMDLIGYCRNHGIDEILQLPDVQERVALYRQYETLAKEQIRRCSRVHGNVVVLNLLHEETIYPTNRFMIYALFPDCN ISIHQMWGLNKQNTVFAVGKSIVNRTSRTNVGALMLQYGGGGHEAAGTCQVGHDQSEDVLDELIARIRGHG >Mature_310_residues TQQKQYRLVTRSDFDGLVCAVLLNELKLIREVMFAHPKDMQDGKVEITGDDITTNLPYVAKAHLVFDHHLSETLRNATDV DNYVIDPRAPSAARVVYNHYGGKKAFPGISDEMMAAVDKADSAQFSIDEILNPKDWVLLNYLMDARTGLGRFREFKVSNF QLMMDLIGYCRNHGIDEILQLPDVQERVALYRQYETLAKEQIRRCSRVHGNVVVLNLLHEETIYPTNRFMIYALFPDCNI SIHQMWGLNKQNTVFAVGKSIVNRTSRTNVGALMLQYGGGGHEAAGTCQVGHDQSEDVLDELIARIRGHG
Specific function: Unknown
COG id: COG0618
COG function: function code R; Exopolyphosphatase-related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35201; Mature: 35069
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQKQYRLVTRSDFDGLVCAVLLNELKLIREVMFAHPKDMQDGKVEITGDDITTNLPYV CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHH AKAHLVFDHHLSETLRNATDVDNYVIDPRAPSAARVVYNHYGGKKAFPGISDEMMAAVDK HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHC ADSAQFSIDEILNPKDWVLLNYLMDARTGLGRFREFKVSNFQLMMDLIGYCRNHGIDEIL CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH QLPDVQERVALYRQYETLAKEQIRRCSRVHGNVVVLNLLHEETIYPTNRFMIYALFPDCN HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCCCC ISIHQMWGLNKQNTVFAVGKSIVNRTSRTNVGALMLQYGGGGHEAAGTCQVGHDQSEDVL CEEEHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEECCCCCCHHHH DELIARIRGHG HHHHHHHCCCC >Mature Secondary Structure TQQKQYRLVTRSDFDGLVCAVLLNELKLIREVMFAHPKDMQDGKVEITGDDITTNLPYV CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHH AKAHLVFDHHLSETLRNATDVDNYVIDPRAPSAARVVYNHYGGKKAFPGISDEMMAAVDK HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHC ADSAQFSIDEILNPKDWVLLNYLMDARTGLGRFREFKVSNFQLMMDLIGYCRNHGIDEIL CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH QLPDVQERVALYRQYETLAKEQIRRCSRVHGNVVVLNLLHEETIYPTNRFMIYALFPDCN HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCCCC ISIHQMWGLNKQNTVFAVGKSIVNRTSRTNVGALMLQYGGGGHEAAGTCQVGHDQSEDVL CEEEHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEECCCCCCHHHH DELIARIRGHG HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA