| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498367
Identifier: 34498367
GI number: 34498367
Start: 3189528
End: 3192230
Strand: Reverse
Name: 34498367
Synonym: CV_2912
Alternate gene names: NA
Gene position: 3192230-3189528 (Counterclockwise)
Preceding gene: 34498368
Following gene: 34498366
Centisome position: 67.19
GC content: 69.48
Gene sequence:
>2703_bases ATGACTGAGTCGCCGAAAGCCAACGAGCCCGACTGGAGCGGCCTCAACCTGCCGGTCCTGACCGAAGTGGTGGACGAGCA GGCCGTTCCGACATTGGCCGAGGAAGCGCCGCCGGCAGAGGTGCCCGAGTTCGACTTTTCCTCCGAACTGGACTTGCTGG CGGCCGAGCTGGACGAGGGCGAGACCGAGCTGGAAATTCCCGAGCTGACACTGGACGAGTTGCTGGAGGCGCCTACGCCC GCGGAGCCCGCCGGCGGCCTGGATTTCAGCAATCTGCCCTCGCTCGAGCTGGCAGACGCGGATGGATCGGTGGACGGCGA GGGGCTGGATTTCGTATTGGAGCCCAAGGCAGAGGCGGCTGTCCAGGATGCGGACGGTTTGGCCGCCTTGATGGCCCGGG CCGACCTGCATCCGGCCGTTTCCGAGTCGGAGCCGCTTGAGCCGGCGGCGGAAACGCCGTCCGAGCCGGAGATGCCAGAG GCGGTCAGCTGGAACGATGTCGTGGCCGCGGCCAGCGAACTGCAGGCCGATTCGCTTCCGGCCCTGGACAGCGATGCGCA GGCGGCGGCGCCTGCCGGATTGCCCGAGCCGGAGGGCGTGTCCGAGGCCGCGCCGCCCCCGGTCGAGATGGGACCCGCCT TGTCACCCGCCGAGCCCGGCGGCGCTGACCTGCCCCCCGAACCGCCCGTTTCGGCTGCCCAGGCGAGCGGCGCTGCCGGA GCGGAGTCGGAGCGGGAAGAGGCGGCGCCGTTCACTTCCATTTCCATAGACAGCTTGCCGAGCGGCGTGCTGGGCGGCGG CGTAGGCCGCGAGCCGGCCCCGCCCAGCGGCCTGGAGTGGCTGTCCGAACTGCCTTCGCAGCAGGCCGAGCCTCCCAAGC CCTCCATCAAGGACATGATAGCCGAGGCGGAGCGCGTGCTGGCCGAGGAGCGCGCCAAGCAGGCAGCCGCCAATCTGGCC GCTGTGGAAGCGTTTGGCACGCGTCCGGCAGAGCCGCCTCCTGCCGCTCCAGAGCCGGCGGCTGCGCCGGCGTCGGAAGA AATCCAGCCGCTTGCCGAGACCGCGGTCAGCGGTTTTGACGAAGCTTCCCCGGTTGCAGAGGCGCCTGTCGGACCGGCAG CGGAGACGGCGCAGGTTCCTGAGCCGGAATCGTTGCCGGATTTCGCCGCTGCGGCGGAGCTGGAAGCGCCGGCCAGCATC GACTCTGCCGAGATCGAGCTGCCGGATGGGCATGGCGAAGCGCCAGCCGAACGAATGGAGGCCATGTCGGAGACAGCGCC CGAGACAGGGCCGCGAGAGCCGGAGGCCGAGACCGGTCCGATGGCGGAAGAGGCGGAACCGGCGATTGTCCTGGACTGGC CTGCGTTGATCGAGCGGGATGTGGAGGCGCAGCCGGCTTCGCTGACGGAAGCCGCGCCCGCTGCCGAGCCGGAGAGGCAG GACGGCGCGCCTCCGCCATTCCCGCCTGAAGCGGGGGATGCATCGCTGCCGGAGTCGGCAGAGGACGCCAGCGCGCCTGC CTGTGAATCGGAACCGGTTGCCGCGTTCGACTCGATCGATGGCGGCGCAGTTGAGGCTGATGGCGCCATGAATGGCGAGC CATCGGTATTGGAGGATGCTGCGGAGTCTGCGCCTGCGCGCTTGCCGGAGCGGCTTGAACCGCTGCAGCCTGAGCCGTCG GCGTGCGGAGCGCAAGAGCAGGCTTTGCTGTTGGATGAGGCCGCGCCGGCAGAGACGCGGGAACCGGATCCGGCGGCGGC GCCGCAAGGCGACGAATTGCCGTCGCTGGAAGAAGAGGCGGAGCCGGCGGCCGGGGAGGACGCGGCGCCGGCATTCGGGC AGGCGGACGCGCTCCTCGAAGGAGAGGAAGACGCGGCGGCATTGCCAGATGCGGCGTTCGATTCTGAACGCGAGCCCGCA ATGGCGCCGGAGGCGCTGGCCGGATTGGCGGCGGAGCCGCATGCGGCCGAAATCGAGCCGTTCGATGCCTTGCCGGAACA TGATCAGCCGGACGAGTCCGTCGAGGAAAGGCCCGAGGCGGCATTCGCGCCGCCGGAGCCGGACTTCGATGCGGCGTTCG AGGGCCATCAGGCCGAGGAACCGCAGGCTGGCGAAGCGTTGCCTGCGGAGGCGCTTTCTGCGTCCATCCCGGTTCTGCCG GTGGCGGAAGCGGCTGTGCCGGACATTCAGCCTGAGCCCGAGGCCAAGCCTCTGGTCGAGGAGGATGCGGTATCCACCTT GTACGAGGCGGTGCCGCAGCCGGCGCCGCTGGAGGACGAGGACATGCCGGCTTTGTCCGGTCTGCTGGGCCGGGGCCTGG CCGCGCCCGCGGTGTCGACTCCGTTGGCTGAGCCGGTCGCGGAGCCGTCGGCGTCAGTCGATTCCGCCGCCGAAGTGTCG GTGCTCAAGGTGGCGGCCATGACCTCAGCCGCGGCCGCGGGAGCCTCCAGGCAGTCGCCCCAAGGGCTGGACGAGCAGGC GCTGTTCGATTCTCTGTACGAGCAGATGCTGCCCAGGATGAAGGTGGAGTTGTCGCTGTGGCTGCAGGATGCGATCGAGG TGCAGGCCAAGCAGATGTTGTCCGGGATGATGCACCAGTTGAAAGAGGACTATGAAATGTTGTTCGGCGACGCGCTGAAG GAGAGCCTGCGCCAGGCGCTGAGCGATGCCGGGCGCAGGGATGGGGAGGGCGGGCATGAGTGA
Upstream 100 bases:
>100_bases TGGGACGCGACCCCGAGTCGCTGGCCACCGCCCGCGAGCGCTTCCGTGCCTACCGTGAGCACGGCTGCGAAATCGAACAT CACGACATGAGTCAAACGCC
Downstream 100 bases:
>100_bases TCGCTTGTCCTCCATCGTCACCCGCACCGGAGACGACGGCGCCACCGGACTGGGCGACGGCAGCCGCGTCGCCAAGGACA GCGTCCGCATCCAGGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 900; Mature: 899
Protein sequence:
>900_residues MTESPKANEPDWSGLNLPVLTEVVDEQAVPTLAEEAPPAEVPEFDFSSELDLLAAELDEGETELEIPELTLDELLEAPTP AEPAGGLDFSNLPSLELADADGSVDGEGLDFVLEPKAEAAVQDADGLAALMARADLHPAVSESEPLEPAAETPSEPEMPE AVSWNDVVAAASELQADSLPALDSDAQAAAPAGLPEPEGVSEAAPPPVEMGPALSPAEPGGADLPPEPPVSAAQASGAAG AESEREEAAPFTSISIDSLPSGVLGGGVGREPAPPSGLEWLSELPSQQAEPPKPSIKDMIAEAERVLAEERAKQAAANLA AVEAFGTRPAEPPPAAPEPAAAPASEEIQPLAETAVSGFDEASPVAEAPVGPAAETAQVPEPESLPDFAAAAELEAPASI DSAEIELPDGHGEAPAERMEAMSETAPETGPREPEAETGPMAEEAEPAIVLDWPALIERDVEAQPASLTEAAPAAEPERQ DGAPPPFPPEAGDASLPESAEDASAPACESEPVAAFDSIDGGAVEADGAMNGEPSVLEDAAESAPARLPERLEPLQPEPS ACGAQEQALLLDEAAPAETREPDPAAAPQGDELPSLEEEAEPAAGEDAAPAFGQADALLEGEEDAAALPDAAFDSEREPA MAPEALAGLAAEPHAAEIEPFDALPEHDQPDESVEERPEAAFAPPEPDFDAAFEGHQAEEPQAGEALPAEALSASIPVLP VAEAAVPDIQPEPEAKPLVEEDAVSTLYEAVPQPAPLEDEDMPALSGLLGRGLAAPAVSTPLAEPVAEPSASVDSAAEVS VLKVAAMTSAAAAGASRQSPQGLDEQALFDSLYEQMLPRMKVELSLWLQDAIEVQAKQMLSGMMHQLKEDYEMLFGDALK ESLRQALSDAGRRDGEGGHE
Sequences:
>Translated_900_residues MTESPKANEPDWSGLNLPVLTEVVDEQAVPTLAEEAPPAEVPEFDFSSELDLLAAELDEGETELEIPELTLDELLEAPTP AEPAGGLDFSNLPSLELADADGSVDGEGLDFVLEPKAEAAVQDADGLAALMARADLHPAVSESEPLEPAAETPSEPEMPE AVSWNDVVAAASELQADSLPALDSDAQAAAPAGLPEPEGVSEAAPPPVEMGPALSPAEPGGADLPPEPPVSAAQASGAAG AESEREEAAPFTSISIDSLPSGVLGGGVGREPAPPSGLEWLSELPSQQAEPPKPSIKDMIAEAERVLAEERAKQAAANLA AVEAFGTRPAEPPPAAPEPAAAPASEEIQPLAETAVSGFDEASPVAEAPVGPAAETAQVPEPESLPDFAAAAELEAPASI DSAEIELPDGHGEAPAERMEAMSETAPETGPREPEAETGPMAEEAEPAIVLDWPALIERDVEAQPASLTEAAPAAEPERQ DGAPPPFPPEAGDASLPESAEDASAPACESEPVAAFDSIDGGAVEADGAMNGEPSVLEDAAESAPARLPERLEPLQPEPS ACGAQEQALLLDEAAPAETREPDPAAAPQGDELPSLEEEAEPAAGEDAAPAFGQADALLEGEEDAAALPDAAFDSEREPA MAPEALAGLAAEPHAAEIEPFDALPEHDQPDESVEERPEAAFAPPEPDFDAAFEGHQAEEPQAGEALPAEALSASIPVLP VAEAAVPDIQPEPEAKPLVEEDAVSTLYEAVPQPAPLEDEDMPALSGLLGRGLAAPAVSTPLAEPVAEPSASVDSAAEVS VLKVAAMTSAAAAGASRQSPQGLDEQALFDSLYEQMLPRMKVELSLWLQDAIEVQAKQMLSGMMHQLKEDYEMLFGDALK ESLRQALSDAGRRDGEGGHE >Mature_899_residues TESPKANEPDWSGLNLPVLTEVVDEQAVPTLAEEAPPAEVPEFDFSSELDLLAAELDEGETELEIPELTLDELLEAPTPA EPAGGLDFSNLPSLELADADGSVDGEGLDFVLEPKAEAAVQDADGLAALMARADLHPAVSESEPLEPAAETPSEPEMPEA VSWNDVVAAASELQADSLPALDSDAQAAAPAGLPEPEGVSEAAPPPVEMGPALSPAEPGGADLPPEPPVSAAQASGAAGA ESEREEAAPFTSISIDSLPSGVLGGGVGREPAPPSGLEWLSELPSQQAEPPKPSIKDMIAEAERVLAEERAKQAAANLAA VEAFGTRPAEPPPAAPEPAAAPASEEIQPLAETAVSGFDEASPVAEAPVGPAAETAQVPEPESLPDFAAAAELEAPASID SAEIELPDGHGEAPAERMEAMSETAPETGPREPEAETGPMAEEAEPAIVLDWPALIERDVEAQPASLTEAAPAAEPERQD GAPPPFPPEAGDASLPESAEDASAPACESEPVAAFDSIDGGAVEADGAMNGEPSVLEDAAESAPARLPERLEPLQPEPSA CGAQEQALLLDEAAPAETREPDPAAAPQGDELPSLEEEAEPAAGEDAAPAFGQADALLEGEEDAAALPDAAFDSEREPAM APEALAGLAAEPHAAEIEPFDALPEHDQPDESVEERPEAAFAPPEPDFDAAFEGHQAEEPQAGEALPAEALSASIPVLPV AEAAVPDIQPEPEAKPLVEEDAVSTLYEAVPQPAPLEDEDMPALSGLLGRGLAAPAVSTPLAEPVAEPSASVDSAAEVSV LKVAAMTSAAAAGASRQSPQGLDEQALFDSLYEQMLPRMKVELSLWLQDAIEVQAKQMLSGMMHQLKEDYEMLFGDALKE SLRQALSDAGRRDGEGGHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92321; Mature: 92190
Theoretical pI: Translated: 3.43; Mature: 3.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESPKANEPDWSGLNLPVLTEVVDEQAVPTLAEEAPPAEVPEFDFSSELDLLAAELDEG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC ETELEIPELTLDELLEAPTPAEPAGGLDFSNLPSLELADADGSVDGEGLDFVLEPKAEAA CCEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEECCCHHHH VQDADGLAALMARADLHPAVSESEPLEPAAETPSEPEMPEAVSWNDVVAAASELQADSLP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC ALDSDAQAAAPAGLPEPEGVSEAAPPPVEMGPALSPAEPGGADLPPEPPVSAAQASGAAG CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC AESEREEAAPFTSISIDSLPSGVLGGGVGREPAPPSGLEWLSELPSQQAEPPKPSIKDMI CCHHHHHHCCCCEEEHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH AEAERVLAEERAKQAAANLAAVEAFGTRPAEPPPAAPEPAAAPASEEIQPLAETAVSGFD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC EASPVAEAPVGPAAETAQVPEPESLPDFAAAAELEAPASIDSAEIELPDGHGEAPAERME CCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHH AMSETAPETGPREPEAETGPMAEEAEPAIVLDWPALIERDVEAQPASLTEAAPAAEPERQ HHHHHCCCCCCCCCCCCCCCCCHHCCCCEEEECHHHHHCCCCCCCCHHHHHCCCCCCCCC DGAPPPFPPEAGDASLPESAEDASAPACESEPVAAFDSIDGGAVEADGAMNGEPSVLEDA CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHCCCCCCEECCCCCCCCCHHHHHH AESAPARLPERLEPLQPEPSACGAQEQALLLDEAAPAETREPDPAAAPQGDELPSLEEEA HHHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHC EPAAGEDAAPAFGQADALLEGEEDAAALPDAAFDSEREPAMAPEALAGLAAEPHAAEIEP CCCCCCCCCCCCCCCHHHHCCCCHHHHCCCHHCCCCCCCCCCHHHHHHCCCCCCCCCCCC FDALPEHDQPDESVEERPEAAFAPPEPDFDAAFEGHQAEEPQAGEALPAEALSASIPVLP CCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCC VAEAAVPDIQPEPEAKPLVEEDAVSTLYEAVPQPAPLEDEDMPALSGLLGRGLAAPAVST CHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHC PLAEPVAEPSASVDSAAEVSVLKVAAMTSAAAAGASRQSPQGLDEQALFDSLYEQMLPRM CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH KVELSLWLQDAIEVQAKQMLSGMMHQLKEDYEMLFGDALKESLRQALSDAGRRDGEGGHE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TESPKANEPDWSGLNLPVLTEVVDEQAVPTLAEEAPPAEVPEFDFSSELDLLAAELDEG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC ETELEIPELTLDELLEAPTPAEPAGGLDFSNLPSLELADADGSVDGEGLDFVLEPKAEAA CCEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEECCCHHHH VQDADGLAALMARADLHPAVSESEPLEPAAETPSEPEMPEAVSWNDVVAAASELQADSLP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC ALDSDAQAAAPAGLPEPEGVSEAAPPPVEMGPALSPAEPGGADLPPEPPVSAAQASGAAG CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC AESEREEAAPFTSISIDSLPSGVLGGGVGREPAPPSGLEWLSELPSQQAEPPKPSIKDMI CCHHHHHHCCCCEEEHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH AEAERVLAEERAKQAAANLAAVEAFGTRPAEPPPAAPEPAAAPASEEIQPLAETAVSGFD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC EASPVAEAPVGPAAETAQVPEPESLPDFAAAAELEAPASIDSAEIELPDGHGEAPAERME CCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHH AMSETAPETGPREPEAETGPMAEEAEPAIVLDWPALIERDVEAQPASLTEAAPAAEPERQ HHHHHCCCCCCCCCCCCCCCCCHHCCCCEEEECHHHHHCCCCCCCCHHHHHCCCCCCCCC DGAPPPFPPEAGDASLPESAEDASAPACESEPVAAFDSIDGGAVEADGAMNGEPSVLEDA CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHCCCCCCEECCCCCCCCCHHHHHH AESAPARLPERLEPLQPEPSACGAQEQALLLDEAAPAETREPDPAAAPQGDELPSLEEEA HHHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHC EPAAGEDAAPAFGQADALLEGEEDAAALPDAAFDSEREPAMAPEALAGLAAEPHAAEIEP CCCCCCCCCCCCCCCHHHHCCCCHHHHCCCHHCCCCCCCCCCHHHHHHCCCCCCCCCCCC FDALPEHDQPDESVEERPEAAFAPPEPDFDAAFEGHQAEEPQAGEALPAEALSASIPVLP CCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCC VAEAAVPDIQPEPEAKPLVEEDAVSTLYEAVPQPAPLEDEDMPALSGLLGRGLAAPAVST CHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHC PLAEPVAEPSASVDSAAEVSVLKVAAMTSAAAAGASRQSPQGLDEQALFDSLYEQMLPRM CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH KVELSLWLQDAIEVQAKQMLSGMMHQLKEDYEMLFGDALKESLRQALSDAGRRDGEGGHE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA