| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498358
Identifier: 34498358
GI number: 34498358
Start: 3179947
End: 3181149
Strand: Direct
Name: 34498358
Synonym: CV_2903
Alternate gene names: NA
Gene position: 3179947-3181149 (Clockwise)
Preceding gene: 34498356
Following gene: 34498359
Centisome position: 66.93
GC content: 70.07
Gene sequence:
>1203_bases ATGACCCCCATCTGGCACAATCTGATGCTGAATCCGCTGGCCGCGTTCGGCATCCTGCTGGCGCTGGGCGTGATAGGCGG CCAGATCGCGGTGCGCGTCGCGCGCCTGCCCGCCATCACCGGCTACATCGTCACCGGCCTGATCATCGGCCCCTACAGCC TCAACCTGCTCAATCAGGAATTATTGAACGAGGCCTCGCTGTTCGTGCAGCTGGCCCTGGGCATCGCGCTGTTCGAAGCC GGCCGCCGCGTGGACCTGCGCTGGCTGCGGGTGGAGAAGACGCTGCTCACCACCACCCTGTTCTACTGTCTGCTGCTGTT CGCCGCGCTGTTCGCGCTGCTGAACGCCAGCGGCTTCGGCGCGCCGGCCAGCCTGATGCTGGCGGCGCTAGGCATCGCCA CCTCGCCCATCGTGGTGCTGGAGATCGTGCGCGAGTCCCGCGCCGACGGCCAGGTGAGCGAACGGCTGCTGACCGCCACC GCGCTGTCCAGCCTGCTGGCGATGGCGGGCTTCGCGCTGGCGCTGTCCTACACCCATCTTTCCGCCGACCACAGCGTGGA AGACGGCATCCTGATGCCGGGCTGGCTGATCCTGGGCTCGGTGGCGCTGGGCCTGGTCGCCGGCCTGGTCACCACCCAGC TCAACCGCTGGCTGGGCGGCCATCAGCGCGAGGCGCAGCGCGTGCTGCTGTTCGGCTTGATCGCGCTCCTGGTCGGCGCC GCCGACATGCTGCAGCTGCTGGCGCTGATGGCGCTGCTGGTGGCGGGCATGAGCACCCGCAACCTGCGCCACGGCTACAC CGTCAGCGAACCGGGCATCCTGTCGCTGAGCCATGTGTTCACCGTCGCCTTCTTCGTCTCCGCCGGCGCCCACCTGTCGC CGCAGGCGCTGGCCTCGCACTGGCCGCTGGCGCTGCTGTGCCTGATCCTGCGCGGCGGCATCGGCATGCTGGTATGGTGG CTGGCGGCGCGCGGCAACGGCCTGTCGCGCAGGCAGGGGGCCTGGCTGGGGCTGGCGCTCAGCCCGATGAACAGCGGCTC CGCGCTGCTGCTGGGCCTGGGCATGGTGTCGCTGGGCGAAGCCGCCGCCAGCTTCAGCGCGGCGCTGATGGCCGCGCTGC TGATCAACGAGATCGCCGCCCCCATCCTCACCCGGCTAGCCCTGCGCCTGGCCGGCGAAACCGCAGGAGCCAGCCATGCT TGA
Upstream 100 bases:
>100_bases ATAGCATGAACTCTTGGCTCGGAATCGCGTCAGTCATTGATACCTTAGGGCGGGCATGCGGCAATTCAATGCCCGCCCCC GCAATAGAGGAGAAACCATC
Downstream 100 bases:
>100_bases ATTCAACCAAAGCCAGCCGCTCACCCTGGGCGTGGAGCTGGAACTGATGATACTGAACCGCCGCGACTACAACCTCACCC GCGGCTCCGACGACCTGCTG
Product: Na/H+ antiporter
Products: NA
Alternate protein names: Transmembrane Protein; Sodium/Hydrogen Exchanger; Na/H Antiporter
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MTPIWHNLMLNPLAAFGILLALGVIGGQIAVRVARLPAITGYIVTGLIIGPYSLNLLNQELLNEASLFVQLALGIALFEA GRRVDLRWLRVEKTLLTTTLFYCLLLFAALFALLNASGFGAPASLMLAALGIATSPIVVLEIVRESRADGQVSERLLTAT ALSSLLAMAGFALALSYTHLSADHSVEDGILMPGWLILGSVALGLVAGLVTTQLNRWLGGHQREAQRVLLFGLIALLVGA ADMLQLLALMALLVAGMSTRNLRHGYTVSEPGILSLSHVFTVAFFVSAGAHLSPQALASHWPLALLCLILRGGIGMLVWW LAARGNGLSRRQGAWLGLALSPMNSGSALLLGLGMVSLGEAAASFSAALMAALLINEIAAPILTRLALRLAGETAGASHA
Sequences:
>Translated_400_residues MTPIWHNLMLNPLAAFGILLALGVIGGQIAVRVARLPAITGYIVTGLIIGPYSLNLLNQELLNEASLFVQLALGIALFEA GRRVDLRWLRVEKTLLTTTLFYCLLLFAALFALLNASGFGAPASLMLAALGIATSPIVVLEIVRESRADGQVSERLLTAT ALSSLLAMAGFALALSYTHLSADHSVEDGILMPGWLILGSVALGLVAGLVTTQLNRWLGGHQREAQRVLLFGLIALLVGA ADMLQLLALMALLVAGMSTRNLRHGYTVSEPGILSLSHVFTVAFFVSAGAHLSPQALASHWPLALLCLILRGGIGMLVWW LAARGNGLSRRQGAWLGLALSPMNSGSALLLGLGMVSLGEAAASFSAALMAALLINEIAAPILTRLALRLAGETAGASHA >Mature_399_residues TPIWHNLMLNPLAAFGILLALGVIGGQIAVRVARLPAITGYIVTGLIIGPYSLNLLNQELLNEASLFVQLALGIALFEAG RRVDLRWLRVEKTLLTTTLFYCLLLFAALFALLNASGFGAPASLMLAALGIATSPIVVLEIVRESRADGQVSERLLTATA LSSLLAMAGFALALSYTHLSADHSVEDGILMPGWLILGSVALGLVAGLVTTQLNRWLGGHQREAQRVLLFGLIALLVGAA DMLQLLALMALLVAGMSTRNLRHGYTVSEPGILSLSHVFTVAFFVSAGAHLSPQALASHWPLALLCLILRGGIGMLVWWL AARGNGLSRRQGAWLGLALSPMNSGSALLLGLGMVSLGEAAASFSAALMAALLINEIAAPILTRLALRLAGETAGASHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41937; Mature: 41805
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIWHNLMLNPLAAFGILLALGVIGGQIAVRVARLPAITGYIVTGLIIGPYSLNLLNQE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LLNEASLFVQLALGIALFEAGRRVDLRWLRVEKTLLTTTLFYCLLLFAALFALLNASGFG HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC APASLMLAALGIATSPIVVLEIVRESRADGQVSERLLTATALSSLLAMAGFALALSYTHL CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SADHSVEDGILMPGWLILGSVALGLVAGLVTTQLNRWLGGHQREAQRVLLFGLIALLVGA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCH ADMLQLLALMALLVAGMSTRNLRHGYTVSEPGILSLSHVFTVAFFVSAGAHLSPQALASH HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHC WPLALLCLILRGGIGMLVWWLAARGNGLSRRQGAWLGLALSPMNSGSALLLGLGMVSLGE CHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH AAASFSAALMAALLINEIAAPILTRLALRLAGETAGASHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TPIWHNLMLNPLAAFGILLALGVIGGQIAVRVARLPAITGYIVTGLIIGPYSLNLLNQE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LLNEASLFVQLALGIALFEAGRRVDLRWLRVEKTLLTTTLFYCLLLFAALFALLNASGFG HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC APASLMLAALGIATSPIVVLEIVRESRADGQVSERLLTATALSSLLAMAGFALALSYTHL CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SADHSVEDGILMPGWLILGSVALGLVAGLVTTQLNRWLGGHQREAQRVLLFGLIALLVGA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCH ADMLQLLALMALLVAGMSTRNLRHGYTVSEPGILSLSHVFTVAFFVSAGAHLSPQALASH HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHC WPLALLCLILRGGIGMLVWWLAARGNGLSRRQGAWLGLALSPMNSGSALLLGLGMVSLGE CHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH AAASFSAALMAALLINEIAAPILTRLALRLAGETAGASHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA