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The map label for this gene is flgB [H]

Identifier: 34498343

GI number: 34498343

Start: 3163867

End: 3164280

Strand: Reverse

Name: flgB [H]

Synonym: CV_2888

Alternate gene names: 34498343

Gene position: 3164280-3163867 (Counterclockwise)

Preceding gene: 34498345

Following gene: 34498342

Centisome position: 66.6

GC content: 61.11

Gene sequence:

>414_bases
ATGCTAGACAAGATTGCCCACTATTTCGACTTTCAGCAGCGCGCGCTGAACTTGCAGGCGTATCGTGCCGAAGTGATAGG
CAGCAATGTGGCGAACGCCGAAACGCCGTATTACAAGGCGGTGGATTTCGATTTCAAGTCGGCGCTTCAGGCGCAGGTGG
ACAAGCAGGGGCAGCTGGGACTGGCGCTGACCGACGCGCGCCATATCGCAAACCAGACTGGCGGCGCCGCCGGCGTGCAG
CTGCAATACCGCAGCGCGGTGCAGCCCAGCCTGGACGGCAACACGGTCGACATGGATATCGAGCGCGGCGCTTTCGCCGA
CAACGCTTTGCAGTATCAGTCCACGCTGGCGTTTCTGAACAAGAAGATCAGCGGGCTGAACTCGGCGATCCAGGGCAGCG
GCAACGGAGGCTGA

Upstream 100 bases:

>100_bases
TGCCGCTTGGCGCCGAATCGGCGTGAAAACTTGGCTTTTCGGGCCTTTCGGGTGCTGGCACACTTCGTGCTTTAGCGTAG
GCCAGCGAGGAGATTGCCCA

Downstream 100 bases:

>100_bases
TTGAATGTCCTTGTCCAATCTCTTCAATATTTCGGGTTCCGCGCTTTCCGCGCAGTCGATGCGGCTCAACGTGGTGGCCA
GCAACCTGGCCAACGCCGAA

Product: flagellar basal-body rod protein flgB

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MLDKIAHYFDFQQRALNLQAYRAEVIGSNVANAETPYYKAVDFDFKSALQAQVDKQGQLGLALTDARHIANQTGGAAGVQ
LQYRSAVQPSLDGNTVDMDIERGAFADNALQYQSTLAFLNKKISGLNSAIQGSGNGG

Sequences:

>Translated_137_residues
MLDKIAHYFDFQQRALNLQAYRAEVIGSNVANAETPYYKAVDFDFKSALQAQVDKQGQLGLALTDARHIANQTGGAAGVQ
LQYRSAVQPSLDGNTVDMDIERGAFADNALQYQSTLAFLNKKISGLNSAIQGSGNGG
>Mature_137_residues
MLDKIAHYFDFQQRALNLQAYRAEVIGSNVANAETPYYKAVDFDFKSALQAQVDKQGQLGLALTDARHIANQTGGAAGVQ
LQYRSAVQPSLDGNTVDMDIERGAFADNALQYQSTLAFLNKKISGLNSAIQGSGNGG

Specific function: Unknown

COG id: COG1815

COG function: function code N; Flagellar basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787313, Length=139, Percent_Identity=48.9208633093525, Blast_Score=124, Evalue=2e-30,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006300 [H]

Pfam domain/function: PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14730; Mature: 14730

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKIAHYFDFQQRALNLQAYRAEVIGSNVANAETPYYKAVDFDFKSALQAQVDKQGQLG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCC
LALTDARHIANQTGGAAGVQLQYRSAVQPSLDGNTVDMDIERGAFADNALQYQSTLAFLN
EEEHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
KKISGLNSAIQGSGNGG
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLDKIAHYFDFQQRALNLQAYRAEVIGSNVANAETPYYKAVDFDFKSALQAQVDKQGQLG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCC
LALTDARHIANQTGGAAGVQLQYRSAVQPSLDGNTVDMDIERGAFADNALQYQSTLAFLN
EEEHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
KKISGLNSAIQGSGNGG
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]